Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0738
         (725 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81119-6|CAB03337.2|  401|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z73425-5|CAA97787.1|  427|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AC026301-13|AAP13737.1|  766|Caenorhabditis elegans Hypothetical...    28   5.9  

>Z81119-6|CAB03337.2|  401|Caenorhabditis elegans Hypothetical
           protein T10H4.8 protein.
          Length = 401

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 163 RKLKSLLIVKLIYANIFCFVSTEAISLKTFHKRVT 267
           RK    L +KL + NIF F ST ++SLK  +K++T
Sbjct: 365 RKKSFSLEIKLYFQNIFVF-STTSMSLKDKNKKIT 398


>Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical
           protein Y26G10.2 protein.
          Length = 337

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -2

Query: 262 LFCGTFLEKLPPLRRNKICSRKLTLRSIMILIFFFTECLYF 140
           LFC   L  L   R++K C R+     + I +F F   +++
Sbjct: 118 LFCNRILSILNMYRKSKTCIRRFFELILYIFVFLFPNIMFY 158


>Z73425-5|CAA97787.1|  427|Caenorhabditis elegans Hypothetical
           protein F12F6.9 protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 338 GPVEPQNRRRRRGSTWEAGCGKYRSHGPK 424
           GP  P  RR R+G+  ++  G + S GPK
Sbjct: 165 GPSGPPGRRGRKGADGKSAMGGFGSPGPK 193


>AC026301-13|AAP13737.1|  766|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.1 protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 591 SPRALLPADYPNPCWGCLAPHAARLASERATVRQRAHRRSAAV 463
           +PR        N C    AP AA L++E+ T   R   R+ AV
Sbjct: 616 TPRRRRSTRIQNSCASAAAPGAASLSTEKLTQSSRKRARTCAV 658


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,042,639
Number of Sequences: 27780
Number of extensions: 258088
Number of successful extensions: 880
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)