Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0737
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   5.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   5.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 87  GYILELRWAQPFSL 128
           GY+ E RW Q F++
Sbjct: 375 GYVCEHRWRQIFNM 388


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 87  GYILELRWAQPFSL 128
           GY+ E RW Q F++
Sbjct: 376 GYVCEHRWRQIFNM 389


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 127 CSSDGTVACLQFTN 168
           CS+ GT+ C+Q  N
Sbjct: 307 CSNAGTLDCVQLVN 320


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 137 SELQAKRLSPSELQDISRTLSLNRSC 60
           ++LQ +RL+P+ LQ  +     + SC
Sbjct: 74  TQLQPQRLAPTHLQSPNTQTHPSASC 99


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 480 KRRITPVFIPTRSSTPMNPS 539
           KR  T + IPT + TP+  S
Sbjct: 3   KREETILVIPTMARTPLKSS 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,656
Number of Sequences: 336
Number of extensions: 2024
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)