Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0737
(573 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664... 73 2e-13
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38... 41 8e-04
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 37 0.013
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 32 0.28
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 32 0.37
08_01_0841 + 8223768-8223871,8227749-8228745,8228779-8228828,822... 32 0.37
11_06_0627 + 25633537-25633884,25635246-25635869 30 1.1
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 30 1.1
03_05_0802 - 27823213-27823701,27823911-27823959,27824053-278241... 30 1.5
06_03_0967 - 26395537-26396590,26400918-26401111 29 2.0
05_02_0075 - 6359897-6360292,6360463-6360465 29 2.6
04_04_0158 - 23187070-23187264,23187347-23187477,23187550-231877... 29 2.6
07_03_0971 + 23038409-23039134,23040321-23040611 29 3.5
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 29 3.5
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 29 3.5
03_05_1044 + 29908348-29908503,29909495-29909626,29910049-299103... 29 3.5
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 28 4.6
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 28 6.1
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 6.1
05_01_0177 + 1231679-1231753,1232259-1232546,1232608-1232685,123... 27 8.0
04_04_1137 - 31153104-31153239,31153804-31154660,31155053-311552... 27 8.0
>09_06_0328 +
22365308-22365415,22365743-22366018,22366166-22366417,
22366542-22366939,22367028-22368021,22368199-22368409,
22368515-22368749,22368874-22368996,22369190-22369310,
22369416-22369625
Length = 975
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/82 (42%), Positives = 48/82 (58%)
Frame = +1
Query: 7 NRALSIWQTSLKRPLVVIHDLFSDSVLDISWSSDGLSLLACSSDGTVACLQFTNKEIGTP 186
+R +++W T+ RPL V F+ SV+D+SWS DG SL ACS DG+VA F KE+G
Sbjct: 315 DRTITVWTTASARPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGSVATFHFEAKELGYR 374
Query: 187 LTLEEKNAFYEKIYGKVLANES 252
L E + + YG V +S
Sbjct: 375 LRDAELDELKKNRYGDVRGRQS 396
>08_01_0058 +
388989-389102,389226-389337,389457-389483,389787-389859,
389958-390061,390144-390358,390429-390528,390739-390805,
391628-391716,391810-391948,392057-392157,392921-393088,
393302-393510
Length = 505
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 13 ALSIWQTSLKRPLVVIHDLFSDSVLDISWSSDGLSLLACSSDGTVACLQFTNKEIGTPLT 192
+L ++ T P+++ L ++ DI+WSSD L S D ++F N+E+G P
Sbjct: 319 SLYVYDTESVAPILIHAGLHYAAITDIAWSSDAKYLAVSSRDCFCTIIEFENEELGLPYN 378
Query: 193 L 195
L
Sbjct: 379 L 379
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 GNRALSIWQTSLKRPLVVIHDLFSDSVLDISWSSDGLSLLACSSDGTVACLQ-FTNKEIG 180
G+ + W S + PL + VL I+WS DG L++ S G + T K++G
Sbjct: 102 GDTTVRFWDLSTQTPLFTCKG-HKNWVLCIAWSPDGNHLVSGSKSGELILWDPKTGKQLG 160
Query: 181 TPLTLEEK 204
TPLT K
Sbjct: 161 TPLTGHRK 168
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 4 GNRALSIWQTSLKRPLV---VIHDLFSDSVLDISWSSDGLSLLACSSDGTVACLQFTNKE 174
G++A+ IW+ + V+ D + +V +WS DG L S D T A +++ +
Sbjct: 46 GDKAVRIWKRAADGAWQCSDVLEDTHNRTVRSCAWSPDGKLLATASFDSTTAIWEYSGGD 105
Query: 175 IGTPLTLE 198
TLE
Sbjct: 106 FECVATLE 113
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 82 VLDISWSSDGLSLLACSSDGTVACLQ-FTNKEIGTPLTLEEK 204
VL I+WS DG L++ S G + T K++GTPLT K
Sbjct: 178 VLCIAWSPDGNHLVSGSKSGELILWDPKTGKQLGTPLTGHRK 219
>08_01_0841 +
8223768-8223871,8227749-8228745,8228779-8228828,
8228896-8230396
Length = 883
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 73 SDSVLDISWSSDGLSLLACSSDGTVACLQFTNKEIGTPL 189
S ++ IS S L L AC SDGT+ACL + K+ PL
Sbjct: 713 SKTLKRISSSLTYLYLGACQSDGTLACLPISEKKRKKPL 751
>11_06_0627 + 25633537-25633884,25635246-25635869
Length = 323
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +1
Query: 82 VLDISWSSDGLSLLACSS-DGTVA 150
VL ++WS DG LLAC S DGT+A
Sbjct: 163 VLSVAWSPDG-KLLACGSMDGTIA 185
>07_03_0011 + 12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 7 NRALSIWQTSLKRPLVVIHDLFSDSVLDISWSSDGLSLLACSSDGTVACLQF 162
++ L IW R L S + ++ W+ +G + AC S+ TV + F
Sbjct: 1020 DQCLHIWSVKEGRILKTYRG--SGGIFEVCWNKEGSKIAACFSNNTVCLMDF 1069
>03_05_0802 -
27823213-27823701,27823911-27823959,27824053-27824120,
27824208-27824276,27824391-27824460,27824556-27824635,
27824706-27824784,27824949-27825025,27825110-27825176,
27825285-27825381,27825478-27825574,27825701-27825739,
27825843-27825907,27826034-27826142,27826275-27826487
Length = 555
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 73 SDSVLDISWSSDGLSLLACSSDGTVACLQFTNKE 174
++++ D+ W DG LL S D TV NK+
Sbjct: 119 NNAIFDVCWIKDGSQLLTASGDQTVKIWSVENKK 152
>06_03_0967 - 26395537-26396590,26400918-26401111
Length = 415
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 76 DSVLDISWSSDGLSLLACSSDGTV 147
++VLD+ W++DG +++ S D TV
Sbjct: 169 NAVLDLQWTTDGTQIISASPDKTV 192
>05_02_0075 - 6359897-6360292,6360463-6360465
Length = 132
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 470 VRREETHHARLHTHSQLDANESLG 541
+RR+ T HAR HT Q DA+ +G
Sbjct: 4 LRRKHTRHARKHTSGQSDASTWIG 27
>04_04_0158 -
23187070-23187264,23187347-23187477,23187550-23187763,
23187834-23187932,23188034-23188156,23188247-23188366,
23188447-23188506,23188592-23188884,23189554-23189707,
23189813-23190130,23190668-23190798,23191001-23191586,
23192125-23192739
Length = 1012
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 457 SRRARPTGRDASRPSSYPLAARRQ*IPRLSARRL 558
SRR R GRD+S +S P +A +PR RRL
Sbjct: 116 SRRRRRGGRDSSAAASAPPSAAELALPRDELRRL 149
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 73 SDSVLDISWSSDGLSLLACSSDGTV 147
+D V DISWS+D L + S D T+
Sbjct: 67 ADGVSDISWSTDSFYLCSASDDRTL 91
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 73 SDSVLDISWSSDGLSLLACSSDGTV 147
S VLD+SWSSD LL+ S+D TV
Sbjct: 313 SGDVLDLSWSSD-KHLLSASTDKTV 336
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 125 LVVRMERSLAYSLRTKKSVHHSLWRKRTHSTRRSMVKFWRTSPG 256
+VV +ER LA + R K+ H + K ++ +S + +T PG
Sbjct: 2174 IVVALERRLASTSREPKTSHEVWFHKEYNAQLKSAITALKTPPG 2217
>03_05_1044 +
29908348-29908503,29909495-29909626,29910049-29910364,
29910447-29910510,29910614-29910727,29910806-29910968,
29911166-29911316,29911403-29911986,29912313-29912542,
29912791-29913045,29913293-29913590
Length = 820
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 73 SDSVLDISWSSDGLSLLACSSDGTVACLQFTN 168
S +L ++WS+D + + SSDG + C T+
Sbjct: 201 SGRMLSVAWSNDAKFIFSGSSDGLIRCWDSTS 232
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 7 NRALSIWQTSLKRPLVVIHDLFSDS--VLDISWSSDGLSLLACSSDGTVAC 153
+++ IW+ L++ H L V+ ++WS D LL C + + C
Sbjct: 251 DKSAIIWKVDEDGELLLKHTLTGHDKPVMMVAWSPDDCQLLTCGMEEVIRC 301
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 4 GNRALSIWQTSLKRPLVVIHDLFSDSVLDISWSSDGLSLLACSSDGTVACLQF-TNKEIG 180
G+R + IW + L + SVL S+ S G ++C SDG V TN+ I
Sbjct: 569 GDRTVKIWAVADGSCLKTFEG-HTSSVLRASFLSHGTQFVSCGSDGLVKLWTIKTNECIA 627
Query: 181 T 183
T
Sbjct: 628 T 628
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 79 SVLDISWSSDGLSLLACSSDGTVACLQ-FTNKEI 177
++ DIS+ +DG + +CS DGTV FT++++
Sbjct: 106 TINDISFDADGEYIGSCSDDGTVVISSLFTDEKL 139
>05_01_0177 +
1231679-1231753,1232259-1232546,1232608-1232685,
1233458-1233673,1233862-1233981,1234079-1234804
Length = 500
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 423 TPRPLRPLDRQIETRTSDGKRRITPVFIPTRSSTPMN 533
TP+ RP RQ + S +++P+F +S+TP N
Sbjct: 340 TPKLTRPASRQSPSTPS---AKVSPIFAKKKSATPKN 373
>04_04_1137 -
31153104-31153239,31153804-31154660,31155053-31155202,
31156188-31156292,31156405-31156473
Length = 438
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 461 DAHVRREETHHARLHT-HSQLDANE 532
D H R ++HH R + H QLDA E
Sbjct: 98 DLHTARNQSHHTRRPSDHRQLDAGE 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,130,167
Number of Sequences: 37544
Number of extensions: 269461
Number of successful extensions: 939
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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