Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0737
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 30 1.0
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81136-4|CAI46577.1| 738|Caenorhabditis elegans Hypothetical pr... 27 7.2
U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical p... 27 7.2
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical pr... 27 9.5
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 27 9.5
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 50.8 bits (116), Expect = 7e-07
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 7 NRALSIWQ-TSLKRPLVVIHDLFSDSVLDISWSSDGLSLLACSSDGTVACLQFTNKEIGT 183
++++SIW +PL VI+++F+ +V+D +W G +LLACS DGTV + + IG
Sbjct: 304 DKSISIWVFPGTLKPLFVINNIFNHTVMDFAWC--GRNLLACSQDGTVKVIHLSESVIGE 361
Query: 184 PLTLEEKNAFYEKIY 228
++ E + +IY
Sbjct: 362 MISNEAMSDLCYQIY 376
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 447 DRQIETRTSDGKRRITPVFIPTRSSTPMNPSALSPAARRTVS 572
++QI+ R DGKRRI PVF T ++ PM ++LS ++TV+
Sbjct: 461 NKQIDVR-KDGKRRIQPVFCGTTTADPM--TSLSSEGKKTVA 499
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 50.8 bits (116), Expect = 7e-07
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 7 NRALSIWQ-TSLKRPLVVIHDLFSDSVLDISWSSDGLSLLACSSDGTVACLQFTNKEIGT 183
++++SIW +PL VI+++F+ +V+D +W G +LLACS DGTV + + IG
Sbjct: 592 DKSISIWVFPGTLKPLFVINNIFNHTVMDFAWC--GRNLLACSQDGTVKVIHLSESVIGE 649
Query: 184 PLTLEEKNAFYEKIY 228
++ E + +IY
Sbjct: 650 MISNEAMSDLCYQIY 664
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 447 DRQIETRTSDGKRRITPVFIPTRSSTPMNPSALSPAARRTVS 572
++QI+ R DGKRRI PVF T ++ PM ++LS ++TV+
Sbjct: 749 NKQIDVR-KDGKRRIQPVFCGTTTADPM--TSLSSEGKKTVA 787
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 7 NRALSIWQTSLKRPLVVIHDLFSDS--VLDISWSSDGLSLLACSSDGT 144
N ++ IW T + V+ SDS ++ ++W+ G LLAC T
Sbjct: 482 NSSVFIWNTKTTKLEKVVKTARSDSAQIMSLAWNPSGRGLLACDRQKT 529
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 79 SVLDISWSSDGLSLLACSSDGTVACLQFTNKEIGTPLTLEEKNAF 213
SVL + WS+D +L+ S++ + + E PLT EK AF
Sbjct: 324 SVLSVLWSADSKFVLSGSNEMNIRVWKANAAEKLGPLTKREKQAF 368
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 76 DSVLDISWSSDGLSLLACSSDGTVACLQFTNKEI 177
D V +SWS+D ++ + S GT+ C + T++ +
Sbjct: 145 DRVTALSWSADLKTVYSGHSSGTLHCHRLTSRSV 178
>Z81136-4|CAI46577.1| 738|Caenorhabditis elegans Hypothetical
protein W02B8.6 protein.
Length = 738
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 295 ISGHSTSKFDERSPRTRSPK 236
+SGH+T+ FDE+S + SP+
Sbjct: 343 LSGHNTTDFDEKSVKMISPR 362
>U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical
protein B0336.11a protein.
Length = 567
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 274 KFDERSPRTRSPKLYHRSSRRMRS 203
KFDE S R+P L RSSR +S
Sbjct: 303 KFDEESTTKRAPSLSRRSSRGPKS 326
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +1
Query: 73 SDSVLDISWSSDGLSLLACSSDGTV 147
S + D+ +S +G +++CS+DG++
Sbjct: 349 SSYITDVRYSDEGNHIISCSTDGSI 373
>Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical
protein F14D7.2 protein.
Length = 457
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 292 SGHSTSKFDERSPRTRSPKLYHRSSRRMRSFPP 194
S H K ++ P T S HRS RR +S PP
Sbjct: 55 SAHD-DKVIKKQPETSSSSPEHRSPRRSKSAPP 86
>Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical
protein ZC506.4b protein.
Length = 954
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 50 WSSYTTCSVTASWIYLGAPMGSAF 121
+S YTTC V SWI+ GS F
Sbjct: 829 FSMYTTCVVWLSWIFFFFGTGSDF 852
>Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical
protein ZC506.4a protein.
Length = 999
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 50 WSSYTTCSVTASWIYLGAPMGSAF 121
+S YTTC V SWI+ GS F
Sbjct: 874 FSMYTTCVVWLSWIFFFFGTGSDF 897
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 16 LSIWQTSLKRPLVVIHDLFSDSVLDISWSSDGLSLLACSSDGTV 147
+ IW S V D + V + W+ G ++L+ S DGTV
Sbjct: 384 VKIWN-SRSSFCTVTFDEHTSGVTAVKWTQSGRAILSASLDGTV 426
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +1
Query: 73 SDSVLDISWSSDGLSLLACSSDGTV 147
S + D+ +S +G +++CS+DG++
Sbjct: 349 SSYITDVRYSDEGNHIISCSTDGSI 373
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,321,248
Number of Sequences: 27780
Number of extensions: 212302
Number of successful extensions: 952
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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