Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0737
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     24   1.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   3.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.0  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   6.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.7  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 130 SSDGTVACLQFTNKEIGTPLTLEEKNAFYEKIYGKVLANESG 255
           S+ G+++ LQF NK+    LTL +K  F    +  V    SG
Sbjct: 252 SNKGSISKLQFHNKDDDLILTLGKKE-FSHYEHQNVFVKNSG 292


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 257 RSLIELTGRVPGDPA 301
           R L+EL  ++PG PA
Sbjct: 35  RHLLELAEKIPGPPA 49


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 164 VNCRQATVPSE 132
           ++CRQ TVP E
Sbjct: 627 ISCRQGTVPDE 637


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 406 DDLASGALCDFSLFG 362
           D+L  G  CD SL G
Sbjct: 404 DELVRGTKCDVSLLG 418


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 92  ISRTLSLNRSCMTTSGLFS 36
           I RTL +NR+ + TS + S
Sbjct: 160 IRRTLHMNRTSLKTSKIVS 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,769
Number of Sequences: 438
Number of extensions: 2977
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)