Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0736
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 40 0.002
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 40 0.002
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 40 0.003
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 39 0.004
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 39 0.005
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 39 0.005
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.10
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 32 0.41
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 1.2
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 1.2
Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.8
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 29 3.8
AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D pr... 29 3.8
AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 3.8
AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 3.8
AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 3.8
AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 3.8
AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C pr... 29 3.8
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 28 6.7
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/84 (39%), Positives = 40/84 (47%)
Frame = +1
Query: 259 CGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPG 438
C YP +V+ G QT +C ++G F A NC + CV GR M CP G
Sbjct: 1226 CDYPQKVS----GCENHGQTNGECS-EHGSFI---ADANNCEVFYRCVWGRKVVMTCPSG 1277
Query: 439 LAFNPDFSRCDWADLVPSCDAEKS 510
FNP S CDW VPSC + S
Sbjct: 1278 TVFNPLLSVCDWPSAVPSCSGQAS 1301
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 PRLASGCKHVQSTPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 232
P+ SGC++ T N C + NC+ + C + M CP G FN
Sbjct: 1229 PQKVSGCENHGQT-------NGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFN 1281
Query: 233 PSV---EWPA 253
P + +WP+
Sbjct: 1282 PLLSVCDWPS 1291
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 376 NCGQYRTCVGGRAFDMV-CPPGLAFNPDFSRCDWADLVPSCD 498
+C C GG F+ C LAFN +CD+ V C+
Sbjct: 1195 DCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCE 1236
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 385 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKSWVSLAP 528
Q+ +CV G A+ CP L FN C SCD K + AP
Sbjct: 114 QFISCVAGGAYMAKCPDSLVFNERTQDCR-----ESCDEVKQDTTTAP 156
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 388 YRTCVGGRAFDMVCPPGLAFNPDFSRCDW 474
+ +C F CPPG FN + CD+
Sbjct: 209 FYSCSNNMVFQRYCPPGTVFNINQQSCDF 237
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 591 NCYYFFSCEQNRARLLSCDIGLAFDPTTGRC 683
NC F+ C R +++C G F+P C
Sbjct: 1257 NCEVFYRCVWGRKVVMTCPSGTVFNPLLSVC 1287
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +1
Query: 355 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
HPN + + TC GG A M CP L FNP CDW V C
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 259 CGYPVEVT-CVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPP 435
C +P +V C G + QP C G F S + + C GRA M CP
Sbjct: 290 CDWPRDVAECAGLPTPQPT-----CEED-GYFSFGQCSSS----FTACTNGRAIVMFCPA 339
Query: 436 GLAFNPDFSRCDWADLVPSC 495
GL F+ RCD+ V C
Sbjct: 340 GLKFSESTVRCDYESNVSEC 359
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 385 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 498
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 34.7 bits (76), Expect = 0.077
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 540 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRARLLSCDIGLAFDPTTGRCV 686
+ + N N+ + Y G C YYFF C N AR LSC L +D + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 388 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +1
Query: 355 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
HPN + + TC GG A M CP L FNP CDW V C
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 259 CGYPVEVT-CVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPP 435
C +P +V C G + QP C G F S + + C GRA M CP
Sbjct: 290 CDWPRDVAECAGLPTPQPT-----CEED-GYFSFGQCSSS----FTACTNGRAIVMFCPA 339
Query: 436 GLAFNPDFSRCDWADLVPSC 495
GL F+ RCD+ V C
Sbjct: 340 GLKFSESTVRCDYESNVSEC 359
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 385 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 498
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 34.7 bits (76), Expect = 0.077
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 540 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRARLLSCDIGLAFDPTTGRCV 686
+ + N N+ + Y G C YYFF C N AR LSC L +D + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 388 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 361 NASPTNCGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKS 510
N S + C + +C G A CP L FNP S CDW V C +EKS
Sbjct: 184 NISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDC-SEKS 233
Score = 34.7 bits (76), Expect = 0.077
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 13/89 (14%)
Frame = +1
Query: 283 CVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQ-------------YRTCVGGRAFDM 423
C PA ++ D P + P NCG+ + C G M
Sbjct: 207 CPANLVFNPAISSCDWPKNVMDCSEKSEKPQNCGEVDGYFSFGRCSSSFSACTNGIPIVM 266
Query: 424 VCPPGLAFNPDFSRCDWADLVPSCDAEKS 510
CP GL F+ CD+ V CD E S
Sbjct: 267 FCPDGLMFSEKNQMCDYEWNVDECDLESS 295
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 385 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAE 504
++ CV G A M CP L ++ + CDW V C E
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE 80
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 394 TCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAE 504
+C GR CPP L FN + CD+ + C E
Sbjct: 328 SCQNGRENIFECPPSLVFNENSLICDYPETSLKCCME 364
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 603 FFSCEQNRARLLSCDIGLAFDPTTGRC 683
+ C R LSC L +DPT +C
Sbjct: 136 YIICNSGSPRFLSCSTPLIYDPTNKKC 162
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 86 STPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEW 247
+T A+ NV +G+Y NC ++ C ++ +M CP GL ++ S+++
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKY 523
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 370 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWAD 480
P++C ++ CV G +++ CP GL+F+ D CD D
Sbjct: 575 PSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
Score = 34.3 bits (75), Expect = 0.10
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 355 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRC 468
+PN++ NCG + C+ +++ M CP GL ++ C
Sbjct: 489 YPNSN--NCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 86 STPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 232
+T A T ++G++ ++C +I C + + N CP+GL F+
Sbjct: 553 TTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFH 601
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = +3
Query: 576 YKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQCNAT 716
Y NC F C +++ +SC GL + + C + C+ T
Sbjct: 489 YPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVT 535
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 307 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 486
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 487 PSC 495
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 385 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 600 YFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRV-QCNAT 716
++ +C + + C+ GL F P RC AD++ +C+ T
Sbjct: 540 HYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQT 579
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 388 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 307 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 486
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 487 PSC 495
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 385 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 600 YFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRV-QCNAT 716
++ +C + + C+ GL F P RC AD++ +C+ T
Sbjct: 540 HYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQT 579
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 388 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 385 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 642 CDIGLAFDPTTGRCVDADRV-QCNAT 716
C+ GL F P RC AD++ +C+ T
Sbjct: 130 CENGLFFSPEQARCAPADQIAECHQT 155
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 397 CVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
C G+ CP L FNP CD++ V C
Sbjct: 594 CANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 394 TCVGGRAFDMVCPPGLAFNPDFSRCDWAD 480
TC GRAF CP L FN CD+A+
Sbjct: 452 TCHDGRAFANDCPGDLVFNKATGTCDFAE 480
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 379 CGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEK 507
C Q Y C+ GR+ C PGL +N C + V +C K
Sbjct: 902 CSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCKIGK 945
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 582 YEGNCY-YFFSCEQNRARLLSCDIGLAFDPTTGRCV-DADRVQCN 710
Y C Y+FSC + R +SC L F + +CV D +C+
Sbjct: 963 YSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECS 1007
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 125 KARNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 232
+ NG Y D D YI C +++ T CP GL ++
Sbjct: 790 RLENGNYGLDCE-DYYISCNNFETTINRCPAGLFYS 824
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 134 NGYYKTDANCDTY-IECRDYQATNMICPDGLHFNPSVE 244
+GYY A C +Y C D Q M CP+ L F+ E
Sbjct: 960 DGYYS--AGCSSYYFSCIDEQIRKMSCPNSLKFSKESE 995
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 322 PDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 471
P CP G++ +S +Y CV ++ CP GL F+ +RC+
Sbjct: 41 PPCPDGDGLYAVGCSS-----KYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +1
Query: 307 PAQTTPDCPHQYGIFKHPNAS-PTNCGQYR-TCVGGRAFDMVCPPGLAFNPDFSRCDWAD 480
P+ TTP H + N + +C Y +C CP GL ++ +RCD+ +
Sbjct: 775 PSVTTPSPQHAAFCERLENGNYGLDCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKE 834
Query: 481 LVPSCDAEKSWVSLAP 528
V C K S P
Sbjct: 835 HVEDCPEYKPTPSTTP 850
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 603 FFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQCN 710
FF+C RA C L F+ TG C A+ + N
Sbjct: 450 FFTCHDGRAFANDCPGDLVFNKATGTCDFAENCEKN 485
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 388 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
Y C GRAF C L +N D C++ C
Sbjct: 1041 YIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDC 1076
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 397 CVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
C G+ F CP L + D + CD+ + V C
Sbjct: 224 CSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +1
Query: 376 NCGQYRT-CVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKSWVSLAP 528
+C +Y C + F CP GL ++ +CD + V C K P
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVEGCPEYKPTTDATP 751
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 31.5 bits (68), Expect = 0.71
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +1
Query: 250 GIPCGYPVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAF 417
G+ C P VTC SI P T CP Y + N P +C G A
Sbjct: 1104 GVCC--PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAI 1161
Query: 418 DMVCPPG 438
D +CPPG
Sbjct: 1162 DGLCPPG 1168
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 31.5 bits (68), Expect = 0.71
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +1
Query: 250 GIPCGYPVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAF 417
G+ C P VTC SI P T CP Y + N P +C G A
Sbjct: 446 GVCC--PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAI 503
Query: 418 DMVCPPG 438
D +CPPG
Sbjct: 504 DGLCPPG 510
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 31.5 bits (68), Expect = 0.71
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +1
Query: 250 GIPCGYPVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAF 417
G+ C P VTC SI P T CP Y + N P +C G A
Sbjct: 446 GVCC--PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAI 503
Query: 418 DMVCPPG 438
D +CPPG
Sbjct: 504 DGLCPPG 510
>Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical
protein T16G12.4 protein.
Length = 213
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 144 TKQTRIVIHTLNAGTIKLLT*YARMVCTLILAW 242
TK+T V+ TL TI L++ + CTLIL W
Sbjct: 70 TKETPFVLVTLAINTIVLISAITQDFCTLILTW 102
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 510 LGFTCPPAPLDAIGNPLNNVINYKYEGNCYY 602
L F C AP +P+ + +++Y GNCYY
Sbjct: 145 LNFICETAPT----SPITDTCSFQYNGNCYY 171
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 10/98 (10%)
Frame = +1
Query: 241 GMAGIPCGYPVEVTCVGRGSIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVG 405
G G+ C E C G+ P Q DC P +YG F PN C Q +C
Sbjct: 1461 GKYGLNCTLDCE--CYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQN 1518
Query: 406 GRAFD-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 504
G D +CP G + +C P+C +
Sbjct: 1519 GAHCDGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 10/98 (10%)
Frame = +1
Query: 241 GMAGIPCGYPVEVTCVGRGSIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVG 405
G G+ C E C G+ P Q DC P +YG F PN C Q +C
Sbjct: 1461 GKYGLNCTLDCE--CYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQN 1518
Query: 406 GRAFD-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 504
G D +CP G + +C P+C +
Sbjct: 1519 GAHCDGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
>Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -3
Query: 545 SIQRSRGASETQDFSASQEGTRSAQSQRL----KSGLNASPGGHTMSKARPPTHVRYWPQ 378
S + E +D S +E T S + + SG+ ASP T S P VRY +
Sbjct: 163 SSSKDHECPEREDLSIHEEPTNSPTNDGVLPSTSSGIPASPADMTASSRNPLRKVRYSLR 222
Query: 377 LVGEALGCLK 348
L +A LK
Sbjct: 223 LPAKAAQRLK 232
>AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D
precursor protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 123 RTLSCGTGYAMDSETERCRDVD--ECN 147
>AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C
protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 630 RLLSCDIGLAFDPTTGRCVDADRVQCN 710
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 603 FFSCEQNRARLLSCDIGLAFDPTTGRC 683
F+ CE R +++C I +D TTG C
Sbjct: 35 FWKCEGGRWIVVTCQINYFYDATTGFC 61
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 555 PLNNVINYKYEGNCYY 602
P+ N ++Y GNCYY
Sbjct: 163 PITNTCTFQYNGNCYY 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,027,750
Number of Sequences: 27780
Number of extensions: 481922
Number of successful extensions: 1403
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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