Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0730
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0341 - 42855667-42855849,42855933-42855981,42856165-428562... 88 6e-18
07_01_0874 - 7261191-7261274,7262291-7262440,7262769-7262916,726... 46 3e-05
05_05_0339 + 24213179-24213821,24214402-24214623,24215035-242152... 37 0.016
01_06_1031 - 33945681-33945822,33946502-33946641,33946748-339469... 37 0.021
01_07_0128 + 41238510-41239146,41239420-41239461,41240076-412402... 35 0.085
02_04_0245 + 21262645-21262754,21262851-21262997,21263100-212631... 34 0.11
08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675 32 0.60
02_05_0192 + 26602247-26602617,26602701-26603016 31 1.4
12_01_0515 + 4081373-4081622,4081725-4081867,4082061-4082219,408... 29 4.2
06_03_0298 - 19272257-19273714 29 4.2
02_04_0363 + 22369461-22370127,22370240-22370310,22370412-223709... 28 7.4
08_02_1512 + 27627740-27629009,27629111-27629256,27629842-276301... 28 9.7
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 28 9.7
>01_07_0341 -
42855667-42855849,42855933-42855981,42856165-42856219,
42856290-42856410,42856495-42856532,42856612-42856675,
42856778-42856885,42857066-42857187,42857544-42857616,
42857700-42857776,42858521-42858632
Length = 333
Score = 88.2 bits (209), Expect = 6e-18
Identities = 39/68 (57%), Positives = 51/68 (75%)
Frame = +2
Query: 260 HENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALS 439
+EN KYLPG KL +NV+A PD+ A KDA++L+FV PHQFV IC L+GK++P +S
Sbjct: 63 NENCKYLPGIKLGANVIADPDLENAVKDANMLVFVTPHQFVEGICKKLVGKLRPGTEGIS 122
Query: 440 LIKGFDIA 463
LIKG +IA
Sbjct: 123 LIKGMEIA 130
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +3
Query: 78 MADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVYEEII-EGKKLTEIIN 254
M + KN V ++GSGNWGS ++++ N A L +F D V MWV+EEI+ GKKL+E IN
Sbjct: 1 MENGHAKNLVAVIGSGNWGSVASRLIASNTAKLPSFHDEVRMWVFEEILPTGKKLSESIN 60
Query: 255 K 257
+
Sbjct: 61 Q 61
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 553 EVAEEKFCETTIGCR-DVMLAPLMRDIIQTDYFRXXXXXXXXXXXICGALKNIVAVGAGF 729
E+A EKF E TIG + D +A + T YF +CG LKN+VA+ AG
Sbjct: 128 EIAVEKFSEATIGYKKDKEVATRWAKLFTTPYFLVSVVEDIEGVELCGTLKNVVAIAAGL 187
Query: 730 VDGLGYGDNTK 762
VDGL G+NTK
Sbjct: 188 VDGLDMGNNTK 198
>07_01_0874 -
7261191-7261274,7262291-7262440,7262769-7262916,
7263136-7263259,7263452-7263653,7263743-7263848,
7263979-7264442
Length = 425
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 257 THENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAAL 436
+H N KYL H+LP N+ A +A AD VP QF + + + P +
Sbjct: 151 SHINCKYLRDHRLPENITATTSASDALAGADFCFHAVPVQFSSSFLEGISTHVDPKLPFI 210
Query: 437 SLIKGFDI 460
SL KG ++
Sbjct: 211 SLSKGLEL 218
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 586 IGCRDVMLAPLMRDIIQTDYFRXXXXXXXXXXXICGALKNIVAVGAGFVDGLGYGDN 756
+ +D LA ++ ++ + R I GALKN++A+ AG V+G+ G+N
Sbjct: 273 VASKDKKLAAAVQQLLASPNLRISTSNDVTGVEIAGALKNVLAIAAGIVEGMHLGNN 329
>05_05_0339 +
24213179-24213821,24214402-24214623,24215035-24215282,
24215385-24215524,24215579-24215753
Length = 475
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = +1
Query: 529 LMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRXXXXXXXXXXXICGALKNI 708
L G NIASE+ +++ I D PL + ++ +F + G LKNI
Sbjct: 225 LGGPNIASEIYNKEYANARICGADKWRKPLAK-FLRQPHFIVWDNSDLITHEVMGGLKNI 283
Query: 709 VAVGAGFVDGL 741
A+GAG V L
Sbjct: 284 YAIGAGMVAAL 294
>01_06_1031 -
33945681-33945822,33946502-33946641,33946748-33946995,
33947355-33947576,33948188-33948839
Length = 467
Score = 36.7 bits (81), Expect = 0.021
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +1
Query: 529 LMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRXXXXXXXXXXXICGALKNI 708
L G NIASE+ +++ I D PL + ++ +F + G LKN+
Sbjct: 228 LGGPNIASEIYNKEYANARICGADKWRKPLAK-FLRQPHFIVWDNSDLITHEVMGGLKNV 286
Query: 709 VAVGAGFVDGL 741
A+GAG V L
Sbjct: 287 YAIGAGMVAAL 297
>01_07_0128 +
41238510-41239146,41239420-41239461,41240076-41240297,
41240909-41241156,41241296-41241435,41241904-41242027
Length = 470
Score = 34.7 bits (76), Expect = 0.085
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 529 LMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRXXXXXXXXXXXICGALKNI 708
L G NIASE+ +++ I + PL + ++ +F + G LKN+
Sbjct: 237 LGGPNIASEIYNKEYANARICGSNKWRKPLAK-FLRQPHFIVWDNSDLVTHEVMGGLKNV 295
Query: 709 VAVGAGFVDGL 741
A+GAG V L
Sbjct: 296 YAIGAGMVAAL 306
>02_04_0245 +
21262645-21262754,21262851-21262997,21263100-21263156,
21263256-21263442,21264700-21264925,21265474-21266003
Length = 418
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 60 DCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAAS 173
DC +L MAD ++G W S +A+ VG A S
Sbjct: 152 DCTVLTMADDSTIKAKVVIGCDGWNSVVARYVGLGAPS 189
>08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675
Length = 264
Score = 31.9 bits (69), Expect = 0.60
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -3
Query: 595 DNQWSFRRIFPQQPPMQYWLPL 530
D++W R+F +QPP+++WL +
Sbjct: 93 DSEWVICRVFKKQPPIEHWLEM 114
>02_05_0192 + 26602247-26602617,26602701-26603016
Length = 228
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 551 RRLLRKNSAKRPLVVGT*CWL--R*CGI-SYRQTTSGSWWWTMRTQSKYVE 694
RRL + R G CW R CG S+R+ +WWW Q ++ E
Sbjct: 46 RRLSAGSGCGRWWSAGDACWRQRRRCGRGSWRRRLLAAWWWRATAQRRFAE 96
>12_01_0515 +
4081373-4081622,4081725-4081867,4082061-4082219,
4082339-4082518,4082616-4082845,4082959-4083099,
4083366-4083420
Length = 385
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 498 IICDIRSMPPPSAISNPLIKDRAAAVGFIFPSKV 397
++ ++ +PPP + P++ +RA G +FP V
Sbjct: 67 VVALLKPLPPPKTVRYPVLFERAWGFGRLFPCDV 100
>06_03_0298 - 19272257-19273714
Length = 485
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 96 KNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTM---WVYE 215
K KVC+VG G G A A+ + R +S E R + W+Y+
Sbjct: 2 KKKVCVVGGGLVGLAAARELQREGHDVSVLEQRGGVGGQWLYD 44
>02_04_0363 +
22369461-22370127,22370240-22370310,22370412-22370978,
22371056-22371301
Length = 516
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 75 DMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFE---DRVTMWVYEE 218
D+ + KVC++G+G G A A+ + R +++ E D W+Y++
Sbjct: 7 DVGKPRASRKVCVIGAGMAGLAAARELRREGHAVTVLEQAGDVGGQWLYDD 57
>08_02_1512 +
27627740-27629009,27629111-27629256,27629842-27630101,
27630346-27630412,27630511-27630545,27630818-27631587,
27631633-27631793
Length = 902
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 776 SDDSSFVLSP*PRPSTKPAP-TATMFFNAP 690
SDD P PRP+ PAP AT++ AP
Sbjct: 142 SDDDDDAEPPPPRPAAAPAPHAATLYTYAP 171
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 785 ETESDDSSFVLSP*PRPSTKPAPTA 711
++++DDS SP P PS P+P+A
Sbjct: 19 DSDADDSDADASPSPSPSRSPSPSA 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,160,734
Number of Sequences: 37544
Number of extensions: 398370
Number of successful extensions: 1215
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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