Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0730
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical p...    99   2e-21
Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical pr...    99   2e-21
Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical pr...    99   2e-21
Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical pr...    99   2e-21
Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical pr...    89   4e-18
U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical
           protein K11H3.1d protein.
          Length = 360

 Score =   99 bits (238), Expect = 2e-21
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 502 KMLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVMLAPLMRDIIQTDYFRXXXXXXXXX 678
           ++LKI  +VLMGAN+A EVA + FCE TIGC R     PL++ +  TD FR         
Sbjct: 149 EILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNFRINVVEDAHT 208

Query: 679 XXICGALKNIVAVGAGFVDGLGYGDNTK 762
             +CGALKN+VA  AGF DGLGYGDNTK
Sbjct: 209 VELCGALKNVVACAAGFTDGLGYGDNTK 236



 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 9/97 (9%)
 Frame = +2

Query: 260 HENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALS 439
           HEN+KYLPG  LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC  L+GKI     A+S
Sbjct: 59  HENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAIS 118

Query: 440 LIKG--FD-------IAEGGGIDLISHIITRC*KFPV 523
           LIKG  FD         + GG+ LIS  I    K  V
Sbjct: 119 LIKGISFDKTNQGVSTEKRGGLKLISEEIKEILKIEV 155



 Score = 69.3 bits (162), Expect = 3e-12
 Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +3

Query: 93  PKNKVCIVGSGNWGSAIAKIVGRNAASL-SNFEDRVTMWVYEEIIEGKKLTEIIN 254
           PK KV I+GSGNWGSAIA+IVG    S    F+  V MWV+EEI+ G+KL+E+IN
Sbjct: 3   PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVIN 56


>Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical
           protein K11H3.1c protein.
          Length = 304

 Score =   99 bits (238), Expect = 2e-21
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 502 KMLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVMLAPLMRDIIQTDYFRXXXXXXXXX 678
           ++LKI  +VLMGAN+A EVA + FCE TIGC R     PL++ +  TD FR         
Sbjct: 93  EILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNFRINVVEDAHT 152

Query: 679 XXICGALKNIVAVGAGFVDGLGYGDNTK 762
             +CGALKN+VA  AGF DGLGYGDNTK
Sbjct: 153 VELCGALKNVVACAAGFTDGLGYGDNTK 180



 Score = 69.3 bits (162), Expect = 3e-12
 Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +3

Query: 93  PKNKVCIVGSGNWGSAIAKIVGRNAASL-SNFEDRVTMWVYEEIIEGKKLTEIIN 254
           PK KV I+GSGNWGSAIA+IVG    S    F+  V MWV+EEI+ G+KL+E+IN
Sbjct: 3   PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVIN 56



 Score = 32.3 bits (70), Expect = 0.41
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +2

Query: 260 HENVKYLPGHKLPSNV 307
           HEN+KYLPG  LP+NV
Sbjct: 59  HENIKYLPGKVLPNNV 74


>Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical
           protein K11H3.1b protein.
          Length = 392

 Score =   99 bits (238), Expect = 2e-21
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 502 KMLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVMLAPLMRDIIQTDYFRXXXXXXXXX 678
           ++LKI  +VLMGAN+A EVA + FCE TIGC R     PL++ +  TD FR         
Sbjct: 181 EILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNFRINVVEDAHT 240

Query: 679 XXICGALKNIVAVGAGFVDGLGYGDNTK 762
             +CGALKN+VA  AGF DGLGYGDNTK
Sbjct: 241 VELCGALKNVVACAAGFTDGLGYGDNTK 268



 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 9/97 (9%)
 Frame = +2

Query: 260 HENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALS 439
           HEN+KYLPG  LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC  L+GKI     A+S
Sbjct: 91  HENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAIS 150

Query: 440 LIKG--FD-------IAEGGGIDLISHIITRC*KFPV 523
           LIKG  FD         + GG+ LIS  I    K  V
Sbjct: 151 LIKGISFDKTNQGVSTEKRGGLKLISEEIKEILKIEV 187



 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +3

Query: 42  FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASL-SNFEDRVTMWVYEE 218
           F+YF     I  M+ K    KV I+GSGNWGSAIA+IVG    S    F+  V MWV+EE
Sbjct: 21  FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 76

Query: 219 IIEGKKLTEIIN 254
           I+ G+KL+E+IN
Sbjct: 77  IVNGEKLSEVIN 88


>Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical
           protein K11H3.1a protein.
          Length = 371

 Score =   99 bits (238), Expect = 2e-21
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 502 KMLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVMLAPLMRDIIQTDYFRXXXXXXXXX 678
           ++LKI  +VLMGAN+A EVA + FCE TIGC R     PL++ +  TD FR         
Sbjct: 160 EILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNFRINVVEDAHT 219

Query: 679 XXICGALKNIVAVGAGFVDGLGYGDNTK 762
             +CGALKN+VA  AGF DGLGYGDNTK
Sbjct: 220 VELCGALKNVVACAAGFTDGLGYGDNTK 247



 Score = 97.9 bits (233), Expect = 7e-21
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = +2

Query: 260 HENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALS 439
           HEN+KYLPG  LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC  L+GKI     A+S
Sbjct: 79  HENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAIS 138

Query: 440 LIKGFDIAEGGGIDLISHIITRC*KFPV 523
           LIKG    + GG+ LIS  I    K  V
Sbjct: 139 LIKGVSTEKRGGLKLISEEIKEILKIEV 166



 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +3

Query: 42  FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASL-SNFEDRVTMWVYEE 218
           F+YF     I  M+ K    KV I+GSGNWGSAIA+IVG    S    F+  V MWV+EE
Sbjct: 9   FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 64

Query: 219 IIEGKKLTEIIN 254
           I+ G+KL+E+IN
Sbjct: 65  IVNGEKLSEVIN 76


>Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical
           protein F47G4.3 protein.
          Length = 374

 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 41/87 (47%), Positives = 53/87 (60%)
 Frame = +1

Query: 502 KMLKIPCAVLMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRXXXXXXXXXX 681
           + L + C+VLMGAN+A EVA+ KFCE TIGC+ +     ++ +  T  FR          
Sbjct: 164 RALGVQCSVLMGANLAGEVADGKFCEATIGCKSLKNGEELKKVFDTPNFRIRVTTDYEAV 223

Query: 682 XICGALKNIVAVGAGFVDGLGYGDNTK 762
            +CGALKNIVA  AGF DGLG+  N K
Sbjct: 224 ELCGALKNIVACAAGFADGLGWAYNVK 250



 Score = 78.6 bits (185), Expect = 5e-15
 Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
 Frame = +2

Query: 257 THENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAAL 436
           THEN KYLPG ++P NVVA   ++EA + A +LI VVPHQ +  IC  L GK++  A A+
Sbjct: 79  THENPKYLPGRRIPDNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKLQKGAHAI 138

Query: 437 SLIKGFDIA-EGGGI--DLISHIITR 505
           SL KG   + E G I   LIS  I R
Sbjct: 139 SLTKGISSSCENGEIKMQLISEDIER 164



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +3

Query: 96  KNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMW 206
           + K+ IVG GNWGSAIA +VG+   +    F+  V++W
Sbjct: 21  RKKIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIW 58


>U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical
           protein C14A11.6 protein.
          Length = 597

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 35/133 (26%), Positives = 47/133 (35%)
 Frame = -3

Query: 451 SLNQRQSSCSWLYFSKQSRADSSDKLMRHHKY*KISIFCSFNYIWNSNNIRRQFVARQVF 272
           S NQ Q    W++F        S K    H Y K+ I CSF +  N +N       + +F
Sbjct: 80  SNNQSQLVSFWIFFF------ISQKHFLRHTY-KMPI-CSFQFWINFSNNSTNCKMKIIF 131

Query: 271 NIFMSLLIISVNFFPSIISSYTHIVTLSSKFDRLAAFRPTIFAIAEPQFPDPTMQTLFFG 92
           N F    +  +NF     +      T+         F  T     E Q   PTMQ L   
Sbjct: 132 NNFKHFPMFFINFLRKRSTPIQSTSTIQK--SPAINFDKTHSDFKESQEDSPTMQFLAET 189

Query: 91  CLSAISKILQSRT 53
               + K L   T
Sbjct: 190 TNVVVEKALSKST 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,026,256
Number of Sequences: 27780
Number of extensions: 338204
Number of successful extensions: 1103
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)