Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0730
(789 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 146 2e-37
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 26 0.35
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 2.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 2.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 7.5
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 9.9
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 146 bits (354), Expect = 2e-37
Identities = 66/89 (74%), Positives = 76/89 (85%)
Frame = +2
Query: 257 THENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAAL 436
THENVKYLPGHKLP N++A+PDVVEAAKDAD+L FVVPHQF++ ICS L GKIKPTA L
Sbjct: 58 THENVKYLPGHKLPPNIIAIPDVVEAAKDADILTFVVPHQFIKRICSALFGKIKPTAIGL 117
Query: 437 SLIKGFDIAEGGGIDLISHIITRC*KFPV 523
SLIKGFD +GGGI+LISHII++ PV
Sbjct: 118 SLIKGFDKKQGGGIELISHIISKQLHIPV 146
Score = 118 bits (285), Expect = 5e-29
Identities = 53/87 (60%), Positives = 65/87 (74%)
Frame = +1
Query: 502 KMLKIPCAVLMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRXXXXXXXXXX 681
K L IP +VLMGAN+ASEVA E FCETTIGC+D +AP+++D+++T YF+
Sbjct: 140 KQLHIPVSVLMGANLASEVANEMFCETTIGCKDKNMAPILKDLMETSYFKVVVVEDVDSV 199
Query: 682 XICGALKNIVAVGAGFVDGLGYGDNTK 762
CGALKNIVA GAGF+DGLG GDNTK
Sbjct: 200 ECCGALKNIVACGAGFIDGLGLGDNTK 226
Score = 95.5 bits (227), Expect = 5e-22
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +3
Query: 96 KNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVYEEIIEGKKLTEIINK 257
K ++CIVGSGNWGS IAKI+G NAA+ SNFEDRVTM+VYEEII GKKLTEIIN+
Sbjct: 4 KLRICIVGSGNWGSTIAKIIGINAANFSNFEDRVTMYVYEEIINGKKLTEIINE 57
Score = 21.4 bits (43), Expect = 9.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 693 SVKEHCGSGCGFRGWPRLR**HKAAVIRLGLM 788
++K G GF L KAAV+RLGLM
Sbjct: 204 ALKNIVACGAGFIDGLGLGDNTKAAVMRLGLM 235
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 26.2 bits (55), Expect = 0.35
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 232 FPSIISSYTHIVTLSSKFDRLAAFRPTIFAIAEPQFP 122
F S+ ++ T S F ++ A PT+F+ P+FP
Sbjct: 332 FWSLRKAFARKKTDYSSFGKILATEPTLFSNVTPKFP 368
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 265 FMSLLIISVNFFPSIISSYTHIVTLSSKFDRL 170
F+ + + FF + SY HI T S++F R+
Sbjct: 89 FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRI 120
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 265 FMSLLIISVNFFPSIISSYTHIVTLSSKFDRL 170
F+ + + FF + SY HI T S++F R+
Sbjct: 89 FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRI 120
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 265 FMSLLIISVNFFPSIISSYTHIVTLSSKFDRL 170
F+ + + FF + SY HI T S++F R+
Sbjct: 28 FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRI 59
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 585 HWLSGRNAGSVNAGY 629
HW SG N G+ GY
Sbjct: 1423 HWKSGHNGGASLTGY 1437
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 585 HWLSGRNAGSVNAGY 629
HW SG N G+ GY
Sbjct: 1419 HWKSGHNGGASLTGY 1433
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 7.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -3
Query: 589 QWSFRRIFPQQPPMQYWLPLI 527
QW+ R+ P +++W+PL+
Sbjct: 486 QWTCRQPEPLIELIEHWMPLL 506
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 9.9
Identities = 5/12 (41%), Positives = 6/12 (50%)
Frame = +2
Query: 638 QTTSGSWWWTMR 673
Q WWW M+
Sbjct: 360 QNEMNKWWWNMK 371
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,235
Number of Sequences: 438
Number of extensions: 4340
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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