Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0728
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.6  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.3  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 358 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAG 459
           AD  KLV GL    +S  +    N + G  IVAG
Sbjct: 255 ADPGKLVLGLGVYGRSFTLASASNNKLGAPIVAG 288


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 359 AGFLGSTATRTTGDTLNFITFMLWAFLKVVMVPVLLR 249
           +GF     T    D  N++TF    F+ V++  +L +
Sbjct: 32  SGFENFVKTYLVSDFENYVTFFCSLFIVVILKLILAK 68


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 229 SCWSRSVLSKTGTITTFKNAHNMK 300
           S W + VL+++G  T+   AH+ +
Sbjct: 267 SRWIKMVLAESGVDTSIYTAHSTR 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,293
Number of Sequences: 336
Number of extensions: 4318
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)