Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0728
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 163 1e-40
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 163 1e-40
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 70 2e-12
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 70 2e-12
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 35 0.075
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.13
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.9
Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical pr... 28 6.5
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 28 8.6
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 28 8.6
AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical... 28 8.6
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 28 8.6
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 163 bits (397), Expect = 1e-40
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = +1
Query: 250 LSKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 429
L K GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI
Sbjct: 473 LVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIF 532
Query: 430 EESGEHIVAGAGELHLEICLKDLEED 507
EESGEHI+AGAGELHLEICLKDLEED
Sbjct: 533 EESGEHIIAGAGELHLEICLKDLEED 558
Score = 161 bits (392), Expect = 4e-40
Identities = 72/86 (83%), Positives = 79/86 (91%)
Frame = +2
Query: 2 MYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMG 181
MY+SKMVPTSDKGRFYAFGRVFSGKV TG KARI GPN+ PGKKEDLYEKTIQRTILMMG
Sbjct: 390 MYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGKKEDLYEKTIQRTILMMG 449
Query: 182 RYVEAIEDVPSGNICGLVGVDQFLAR 259
R++E IED+PSGNI GLVGVDQ+L +
Sbjct: 450 RFIEPIEDIPSGNIAGLVGVDQYLVK 475
Score = 144 bits (350), Expect = 5e-35
Identities = 66/89 (74%), Positives = 73/89 (82%)
Frame = +3
Query: 510 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPR 689
ACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPMPDGL +DI+ G VN R
Sbjct: 560 ACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNAR 619
Query: 690 DDFKTRARYLTEKYEYDVTEARKICALAP 776
D+FK RA+ L EKYEYDVTEARKI P
Sbjct: 620 DEFKARAKILAEKYEYDVTEARKIWCFGP 648
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 163 bits (397), Expect = 1e-40
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = +1
Query: 250 LSKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 429
L K GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI
Sbjct: 473 LVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIF 532
Query: 430 EESGEHIVAGAGELHLEICLKDLEED 507
EESGEHI+AGAGELHLEICLKDLEED
Sbjct: 533 EESGEHIIAGAGELHLEICLKDLEED 558
Score = 161 bits (392), Expect = 4e-40
Identities = 72/86 (83%), Positives = 79/86 (91%)
Frame = +2
Query: 2 MYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMG 181
MY+SKMVPTSDKGRFYAFGRVFSGKV TG KARI GPN+ PGKKEDLYEKTIQRTILMMG
Sbjct: 390 MYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGKKEDLYEKTIQRTILMMG 449
Query: 182 RYVEAIEDVPSGNICGLVGVDQFLAR 259
R++E IED+PSGNI GLVGVDQ+L +
Sbjct: 450 RFIEPIEDIPSGNIAGLVGVDQYLVK 475
Score = 139 bits (336), Expect = 2e-33
Identities = 64/89 (71%), Positives = 72/89 (80%)
Frame = +3
Query: 510 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPR 689
ACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPMPDGL +DI+ G V+ R
Sbjct: 560 ACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVSAR 619
Query: 690 DDFKTRARYLTEKYEYDVTEARKICALAP 776
D+FK RA+Y EKYEY VTEARKI P
Sbjct: 620 DEFKARAKYPGEKYEYAVTEARKIWCFGP 648
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/86 (36%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 KTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI 426
KT TI ++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS P++
Sbjct: 565 KTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKSYPLLTTR 624
Query: 427 NEESGEHIVAGAGELHLEICLKDLEE 504
EESGEH++ G GE +++ + D+ +
Sbjct: 625 VEESGEHVLLGTGEFYMDCVMHDMRK 650
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/87 (37%), Positives = 49/87 (56%)
Frame = +3
Query: 516 IPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDD 695
I IK +DPVV++ ETV E S C +++PNK N++ M A+P+ L EDI+ V +
Sbjct: 655 IDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWN 714
Query: 696 FKTRARYLTEKYEYDVTEARKICALAP 776
+ + KY +D+ AR I A P
Sbjct: 715 RRRLGEFFQTKYNWDLLAARSIWAFGP 741
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = +2
Query: 2 MYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMG 181
++ +K P D +F+ FGRV SG + R++G N++ +ED T+ R + +
Sbjct: 480 VHTTKNYPVDDATQFHVFGRVMSGTLEANTDVRVLGENYSIQDEEDCRRMTVGRLFVRVA 539
Query: 182 RYVEAIEDVPSGNICGLVGVDQ 247
Y + VP+G + G+DQ
Sbjct: 540 SYQIEVSRVPAGCWVLIEGIDQ 561
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/86 (36%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 KTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI 426
KT TI ++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS P++
Sbjct: 440 KTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKSYPLLTTR 499
Query: 427 NEESGEHIVAGAGELHLEICLKDLEE 504
EESGEH++ G GE +++ + D+ +
Sbjct: 500 VEESGEHVLLGTGEFYMDCVMHDMRK 525
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = +3
Query: 516 IPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDD 695
I IK +DPVV++ ETV E S C +++PNK N++ M A+P+ L EDI+ V +
Sbjct: 530 IDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWN 589
Query: 696 FKTRARYLTEKYEYDVTEARKICA 767
+ + KY +D+ AR I A
Sbjct: 590 RRRLGEFFQTKYNWDLLAARSIWA 613
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = +2
Query: 2 MYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMG 181
++ +K P D +F+ FGRV SG + R++G N++ +ED T+ R + +
Sbjct: 355 VHTTKNYPVDDATQFHVFGRVMSGTLEANTDVRVLGENYSIQDEEDCRRMTVGRLFVRVA 414
Query: 182 RYVEAIEDVPSGNICGLVGVDQ 247
Y + VP+G + G+DQ
Sbjct: 415 SYQIEVSRVPAGCWVLIEGIDQ 436
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 322 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 498
PV+ +A++P N D ++ L R K DP + N+E+ E IV+G GELHLEI + +
Sbjct: 446 PVISMAIKPVNRKDADNFIKALTRFTKEDPTFRREYNQEAKETIVSGMGELHLEIYAQRM 505
Query: 499 EED 507
+ +
Sbjct: 506 KSE 508
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = +1
Query: 295 MKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELH 474
+K+ + +VRV++ + D+ L E LK LA D ++ + E+GE + AGE+H
Sbjct: 467 LKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVH 526
Query: 475 LEICLKDLEE 504
L+ C+KDL +
Sbjct: 527 LQKCIKDLND 536
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = +1
Query: 295 MKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELH 474
+K+ + +VRV++ + D+ L E LK LA D ++ + E+GE + AGE+H
Sbjct: 467 LKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVH 526
Query: 475 LEICLKDLEE 504
L+ C+KDL +
Sbjct: 527 LQKCIKDLND 536
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 34.7 bits (76), Expect = 0.075
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +3
Query: 501 GGPACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 680
G AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G
Sbjct: 225 GSDACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDGSD 283
Query: 681 NPRDDFKT 704
+ D KT
Sbjct: 284 EHQCDCKT 291
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 340 VEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKD 495
+EP + L + + L+ L + DP ++ + ++G+ IV GELHLE +KD
Sbjct: 399 IEPPSNRQLNQFNKALEELTREDPSMKIRFDRDTGQTIVETQGELHLE-AIKD 450
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 286 AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSD 408
A + F +P V V + NP L +L+E ++++ K +
Sbjct: 71 AQGKTTITFQTTPAVMVCISKANPEALAQLIEAIRKIVKGE 111
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 226 WSCWSRSVLSKTGTITTFKNAHNMKVMKFSVSPVVR---VAVEPK-NPADL-PKLVEGLK 390
W W + +KTG T+K +K F V+P + +A EPK PA+ PK +
Sbjct: 1085 WFSWPQKQQAKTGEKRTYKKIKQLKDYGFEVAPEPKPTPIAPEPKPTPAETKPKDRLEQR 1144
Query: 391 RLAKSD 408
+AK D
Sbjct: 1145 GMAKVD 1150
>Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical
protein F01D5.5 protein.
Length = 165
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -1
Query: 258 LAKN*STPTRPQMLPEGTSSIASTXXXXXXXXXXXVFSYKSSFFPGVKFGPMMRAFCPVT 79
LA+N +T T + +S+ S+ S K+ K+ PM++AFCPVT
Sbjct: 26 LAENTTTTTEGSTVSSDSSTAGSSEAPCQDDPSTDCASLKN-LCTNSKYTPMLKAFCPVT 84
Query: 78 --TLPEKTRPK 52
P T P+
Sbjct: 85 CNMCPGATTPE 95
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 419 CTMGSDLARRLRPSTSLGRS 360
C MGS+ A+RLRP + GRS
Sbjct: 202 CVMGSEDAQRLRPDRAFGRS 221
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2
Query: 383 PSTSLGRSAGFLGSTATRTTGDTLN 309
PSTS G AGFL STA + G N
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGANNN 166
>Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical
protein C07A9.7b protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 179 GRYVEAIEDVPSGN-ICGLVGV 241
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical
protein C07A9.7a protein.
Length = 465
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 179 GRYVEAIEDVPSGN-ICGLVGV 241
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 624 MKAQPMPDGLPEDIDEGRVNP---RDDFKTRARYLTEKYEYDVTEARKI 761
++ P P PE R NP RDD + ++ E+ VTE R I
Sbjct: 87 IQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQEIEFPVTEERSI 135
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 468 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 358
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical
protein Y39B6A.38 protein.
Length = 410
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +1
Query: 223 LWSCWSRSVLSKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAK 402
LWS S T TT + S+ P + + P+ LP+++E KR+
Sbjct: 259 LWSSHSDPTAQSISTTTTTTTFASFPATPDSIPPPIPQRI---TPSPLPRVIEEEKRITT 315
Query: 403 SDPMVQ 420
+D Q
Sbjct: 316 TDSSTQ 321
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 468 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 358
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,824,393
Number of Sequences: 27780
Number of extensions: 410619
Number of successful extensions: 1078
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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