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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0728
         (777 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p...   130   1e-30
At3g22980.1 68416.m02898 elongation factor Tu family protein sim...    91   6e-19
At5g25230.1 68418.m02991 elongation factor Tu family protein tra...    82   5e-16
At1g06220.2 68414.m00656 elongation factor Tu family protein sim...    80   1e-15
At1g06220.1 68414.m00655 elongation factor Tu family protein sim...    80   1e-15
At1g62750.1 68414.m07082 elongation factor Tu family protein sim...    58   5e-09
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati...    43   2e-04
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati...    43   2e-04
At2g47500.1 68415.m05929 kinesin motor protein-related                 32   0.49 
At5g26210.1 68418.m03119 PHD finger family protein contains Pfam...    30   2.0  
At1g04650.1 68414.m00462 hypothetical protein                          29   2.6  
At1g67560.1 68414.m07697 lipoxygenase family protein similar to ...    29   3.4  
At5g59740.1 68418.m07488 UDP-galactose/UDP-glucose transporter-r...    29   4.5  
At4g33440.1 68417.m04751 glycoside hydrolase family 28 protein /...    29   4.5  
At3g46180.1 68416.m04997 UDP-galactose/UDP-glucose transporter-r...    28   6.0  
At1g24050.1 68414.m03036 expressed protein                             28   6.0  
At2g41620.1 68415.m05143 nucleoporin interacting component famil...    28   7.9  

>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
           putative similar to ELONGATION FACTOR 2 GB:O14460 from
           [Schizosaccharomyces pombe]
          Length = 843

 Score =  130 bits (314), Expect = 1e-30
 Identities = 54/86 (62%), Positives = 71/86 (82%)
 Frame = +2

Query: 2   MYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMG 181
           +YVSKM+P SDKGRF+AFGRVF+GKV TG K RIMGPN+ PG+K+DLY K++QRT++ MG
Sbjct: 378 LYVSKMIPASDKGRFFAFGRVFAGKVSTGMKVRIMGPNYIPGEKKDLYTKSVQRTVIWMG 437

Query: 182 RYVEAIEDVPSGNICGLVGVDQFLAR 259
           +  E +EDVP GN   +VG+DQF+ +
Sbjct: 438 KRQETVEDVPCGNTVAMVGLDQFITK 463



 Score =  130 bits (313), Expect = 1e-30
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
 Frame = +1

Query: 250 LSKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC 423
           ++K  T+T  K  +AH ++ MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C
Sbjct: 461 ITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVC 520

Query: 424 INEESGEHIVAGAGELHLEICLKDLEEDLL 513
             EESGEHIVAGAGELHLEICLKDL++D +
Sbjct: 521 TMEESGEHIVAGAGELHLEICLKDLQDDFM 550



 Score =  104 bits (250), Expect = 6e-23
 Identities = 48/85 (56%), Positives = 64/85 (75%)
 Frame = +3

Query: 522 IKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFK 701
           I KSDPVVS+RETV + S +  +SKSPNKHNRL+M+A+PM +GL E ID+GR+ PRDD K
Sbjct: 555 IIKSDPVVSFRETVCDRSTRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPK 614

Query: 702 TRARYLTEKYEYDVTEARKICALAP 776
            R++ L E++ +D   A+KI A  P
Sbjct: 615 IRSKILAEEFGWDKDLAKKIWAFGP 639


>At3g22980.1 68416.m02898 elongation factor Tu family protein
           similar to eukaryotic translation elongation factor 2
           GB:NP_001952 [Homo sapiens]
          Length = 1015

 Score = 91.5 bits (217), Expect = 6e-19
 Identities = 39/85 (45%), Positives = 62/85 (72%)
 Frame = +1

Query: 250 LSKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 429
           +SK+ T+++ +N   +  M+F VSP +RVA+EP +PAD+  L++GL+ L ++DP V+   
Sbjct: 513 ISKSATLSSTRNCWPLASMEFQVSPTLRVAIEPSDPADMSALMKGLRLLNRADPFVEITV 572

Query: 430 EESGEHIVAGAGELHLEICLKDLEE 504
              GEH++A AGE+HLE C+KDL+E
Sbjct: 573 SARGEHVLAAAGEVHLERCVKDLKE 597



 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
 Frame = +2

Query: 44  FYAFGRVFSGKVVTGQKARIMGPNFTPGKKED----LYEKTIQRTILMMGRYVEAIEDVP 211
           F AF R+FSG +  GQ+  ++   + P K E     + E  +    LMMG+ +  + +V 
Sbjct: 440 FLAFARIFSGVLRAGQRVFVITALYDPLKGESSHKYIQEAELHSLYLMMGQGLTPVTEVK 499

Query: 212 SGNICGLVGVDQFLAR 259
           +GN+  + G+  ++++
Sbjct: 500 AGNVVAIRGLGPYISK 515


>At5g25230.1 68418.m02991 elongation factor Tu family protein
           translation Elongation Factor 2, Schizosaccharomyces
           pombe, PIR:T39902
          Length = 973

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 35/75 (46%), Positives = 54/75 (72%)
 Frame = +1

Query: 280 KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAG 459
           ++ +  + +KF+  PVV+ A EP NP++LPK+VEGL++++KS P+     EESGEH + G
Sbjct: 572 EDVYIFRALKFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILG 631

Query: 460 AGELHLEICLKDLEE 504
            GEL+L+  +KDL E
Sbjct: 632 TGELYLDSIIKDLRE 646



 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 35/87 (40%), Positives = 52/87 (59%)
 Frame = +3

Query: 516 IPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDD 695
           + +K +DPVVS+ ETV E S   C +++PNK N+L M A+P+  GL EDI+ G V+   +
Sbjct: 651 VQVKVADPVVSFCETVVESSSMKCFAETPNKKNKLTMIAEPLDRGLAEDIENGVVSIDWN 710

Query: 696 FKTRARYLTEKYEYDVTEARKICALAP 776
                 +   KY++D+  AR I A  P
Sbjct: 711 RVQLGDFFRTKYDWDLLAARSIWAFGP 737



 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 28/79 (35%), Positives = 45/79 (56%)
 Frame = +2

Query: 8   VSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRY 187
           V+K+ P SD   F  FGRV+SG++ TGQ  R++G  ++P  +ED+  K + +  +   RY
Sbjct: 478 VTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIKEVTKLWIYQARY 537

Query: 188 VEAIEDVPSGNICGLVGVD 244
              +   P G+   + GVD
Sbjct: 538 RIPVSSAPPGSWVLIEGVD 556


>At1g06220.2 68414.m00656 elongation factor Tu family protein
           similar to Cryptosporidium parvum elongation factor-2
           GB:U21667 GI:706974 from [Cryptosporidium parvum]
          Length = 987

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 34/75 (45%), Positives = 54/75 (72%)
 Frame = +1

Query: 280 KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAG 459
           ++ +  + ++F+  PVV+ A EP NP++LPK+VEGL++++KS P+     EESGEH + G
Sbjct: 586 EDVYIFRALQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILG 645

Query: 460 AGELHLEICLKDLEE 504
            GEL+L+  +KDL E
Sbjct: 646 TGELYLDSIMKDLRE 660



 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 35/87 (40%), Positives = 53/87 (60%)
 Frame = +3

Query: 516 IPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDD 695
           + +K +DPVVS+ ETV E S   C +++PNK N++ M A+P+  GL EDI+ G V+   +
Sbjct: 665 VEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVVSIDWN 724

Query: 696 FKTRARYLTEKYEYDVTEARKICALAP 776
            K    +   KY++D+  AR I A  P
Sbjct: 725 RKQLGDFFRTKYDWDLLAARSIWAFGP 751



 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 28/79 (35%), Positives = 45/79 (56%)
 Frame = +2

Query: 8   VSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRY 187
           V+K+ P SD   F  FGRV+SG++ TGQ  R++G  ++P  +ED+  K + +  +   RY
Sbjct: 492 VTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIKEVTKLWIYQARY 551

Query: 188 VEAIEDVPSGNICGLVGVD 244
              +   P G+   + GVD
Sbjct: 552 RIPVSSAPPGSWVLIEGVD 570


>At1g06220.1 68414.m00655 elongation factor Tu family protein
           similar to Cryptosporidium parvum elongation factor-2
           GB:U21667 GI:706974 from [Cryptosporidium parvum]
          Length = 987

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 34/75 (45%), Positives = 54/75 (72%)
 Frame = +1

Query: 280 KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAG 459
           ++ +  + ++F+  PVV+ A EP NP++LPK+VEGL++++KS P+     EESGEH + G
Sbjct: 586 EDVYIFRALQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILG 645

Query: 460 AGELHLEICLKDLEE 504
            GEL+L+  +KDL E
Sbjct: 646 TGELYLDSIMKDLRE 660



 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 35/87 (40%), Positives = 53/87 (60%)
 Frame = +3

Query: 516 IPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDD 695
           + +K +DPVVS+ ETV E S   C +++PNK N++ M A+P+  GL EDI+ G V+   +
Sbjct: 665 VEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVVSIDWN 724

Query: 696 FKTRARYLTEKYEYDVTEARKICALAP 776
            K    +   KY++D+  AR I A  P
Sbjct: 725 RKQLGDFFRTKYDWDLLAARSIWAFGP 751



 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 28/79 (35%), Positives = 45/79 (56%)
 Frame = +2

Query: 8   VSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRY 187
           V+K+ P SD   F  FGRV+SG++ TGQ  R++G  ++P  +ED+  K + +  +   RY
Sbjct: 492 VTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIKEVTKLWIYQARY 551

Query: 188 VEAIEDVPSGNICGLVGVD 244
              +   P G+   + GVD
Sbjct: 552 RIPVSSAPPGSWVLIEGVD 570


>At1g62750.1 68414.m07082 elongation factor Tu family protein
           similar to elongation factor G SP:P34811 [Glycine max
           (Soybean)]
          Length = 783

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +1

Query: 265 TITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQ-CINEESG 441
           T++  +N   ++ M F   PV++VA+EPK  AD+ K+  GL +LA+ DP      +EE  
Sbjct: 475 TLSDPENPVVLERMDFP-DPVIKVAIEPKTKADIDKMATGLIKLAQEDPSFHFSRDEEMN 533

Query: 442 EHIVAGAGELHLEICLKDLEED 507
           + ++ G GELHLEI +  L+ +
Sbjct: 534 QTVIEGMGELHLEIIVDRLKRE 555


>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
           similar to SP|P25039 Elongation factor G 1,
           mitochondrial precursor (mEF-G-1) {Saccharomyces
           cerevisiae}; contains Pfam profiles PF00009: Elongation
           factor Tu GTP binding domain, PF03764: Elongation factor
           G domain IV, PF00679: Elongation factor G C-terminus
          Length = 754

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 322 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 498
           PV+ +AV+P +     +  + L R  K DP  +  ++ ESG+ I++G GELHL+I ++ +
Sbjct: 461 PVMSLAVQPVSKDSGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERM 520

Query: 499 EED 507
             +
Sbjct: 521 RRE 523


>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
           similar to mitochondrial elongation factor GI:3917 from
           [Saccharomyces cerevisiae]
          Length = 754

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 322 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 498
           PV+ +AV+P +     +  + L R  K DP  +  ++ ESG+ I++G GELHL+I ++ +
Sbjct: 461 PVMSLAVQPVSKDSGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERM 520

Query: 499 EED 507
             +
Sbjct: 521 RRE 523


>At2g47500.1 68415.m05929 kinesin motor protein-related 
          Length = 974

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +1

Query: 250 LSKTGTITTFK----NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 387
           LS+T +I   K    N  N      S+S +VR  +  K P D+PKL+E L
Sbjct: 204 LSRTSSINNEKAPSENDSNKLSSPSSLSTLVRAVLSDKKPEDVPKLIESL 253


>At5g26210.1 68418.m03119 PHD finger family protein contains Pfam
           domain, PF00628: PHD-finger
          Length = 255

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 570 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDI 665
           E + LCL   PN+H  + + A+ +P  LPE +
Sbjct: 44  EKENLCLYGHPNEHWEVNLPAEEVPPELPEPV 75


>At1g04650.1 68414.m00462 hypothetical protein
          Length = 936

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 232 KTTDVTRGHILNSFNITSHHKDCTLDSLLIQVLFLSRCKVWSHDA 98
           KTT    G +LN+  +T   +   LDSL +       CK  SHD+
Sbjct: 334 KTTVDLLGALLNAAELTQEFRLTLLDSLFVDEFSNQICKKQSHDS 378


>At1g67560.1 68414.m07697 lipoxygenase family protein similar to
           13-lipoxygenase GB:CAA65269 [Solanum tuberosum],
           gi:1654140 [Lycopersicon esculentum]
          Length = 917

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = +3

Query: 591 SKSPNKHNRLFMKAQPM-----PDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDV 743
           SK+ N   R+  ++QP      PDG+ E  ++  V+ R D K   +     Y+YDV
Sbjct: 204 SKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDV 259


>At5g59740.1 68418.m07488 UDP-galactose/UDP-glucose
           transporter-related weak similarity to
           UDP-galactose/UDP-glucose transporter [Arabidopsis
           thaliana] GI:22651763
          Length = 344

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 220 VTRGHILNSFNITSHHKDCTLDSLLIQVL 134
           + +GH+L + +  S H+DC LD  L+  +
Sbjct: 228 ILQGHLLPAVDFVSLHRDCLLDIALLSTV 256


>At4g33440.1 68417.m04751 glycoside hydrolase family 28 protein /
           polygalacturonase (pectinase) family protein weak
           similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15)
           (Pectinase) {Agrobacterium tumefaciens}; contains
           PF00295: Glycosyl hydrolases family 28
          Length = 475

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 211 LW*HLWSCWSRSVLSKTGTITTFKNAHNMKVMKFSV 318
           +W  LW  W+R+++   G +   KN+HN+ +   ++
Sbjct: 193 MWWELW--WNRTLVHTRGHLIELKNSHNILISNLTL 226


>At3g46180.1 68416.m04997 UDP-galactose/UDP-glucose
           transporter-related contains weak similarity to
           UDP-galactose/UDP-glucose transporter (GI:22651763)
           [Arabidopsis thaliana]
          Length = 347

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 220 VTRGHILNSFNITSHHKDCTLDSLLIQVL 134
           + +GH+L + +  S H+DC  D  L+  +
Sbjct: 229 ILQGHLLPAVDFVSRHRDCLFDIALLSTV 257


>At1g24050.1 68414.m03036 expressed protein
          Length = 173

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 35  KGRFYAFGRVFSGKVVTGQKARIMGPNFTPG 127
           +G  +A G ++S KV+TG + R +G    PG
Sbjct: 15  EGEKFAVGNIYSVKVITGDEFRGIGTKPRPG 45


>At2g41620.1 68415.m05143 nucleoporin interacting component family
           protein contains Pfam profile PF04097: Nucleoporin
           interacting component
          Length = 861

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -3

Query: 118 KVWSHDASFLSGNNLARENASKGVETTFVGGRHHLAHVH 2
           K+W    +    ++  R+  SK +    +G RHHL H H
Sbjct: 251 KIWQLVQAITGEDSAVRQGVSKRMALA-IGARHHLQHGH 288


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,977,531
Number of Sequences: 28952
Number of extensions: 390065
Number of successful extensions: 1140
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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