Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0726
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    25   1.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.6  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   3.4  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = +1

Query: 511 SRSTPRSEASSRISVC--PSLSTWVRTPS-RCWTTRCTSGS 624
           +RSTP S   ++ S C  P  S W R  S RC   R  S S
Sbjct: 47  TRSTPSSPRLAQASTCPVPCSSIWSRPSSMRCAPARTASCS 87


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 541  LMPPSAV*SASCPQGCPSRMRPSRQDPEYV 452
            ++P S + +A+   G PS M P   +P YV
Sbjct: 3224 VVPGSGLPAAAASGGAPSAMPPIVNEPPYV 3253


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 502 QGCPSRMRPSRQDPEYVLRRLQQWR 428
           +G P  M  S +  E VLR L+ WR
Sbjct: 319 EGYPIYMNNSVKQDEEVLRELEPWR 343


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,171
Number of Sequences: 2352
Number of extensions: 16728
Number of successful extensions: 54
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)