Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0725
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   3.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   5.3  

>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 292 ATYARSDARRQNRGHTTGQRRRVQGIGRTRHR 387
           AT A ++ +R++RG   G    +  +  TRH+
Sbjct: 324 ATPANNNDKRKSRGEVDGLGENMMDMSLTRHQ 355


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 160 YFYWLGFVHSTYAHK 204
           YF++L ++++TY+ K
Sbjct: 87  YFFYLSYIYTTYSRK 101


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 160 YFYWLGFVHSTYAHK 204
           YF++L ++++TY+ K
Sbjct: 43  YFFYLSYIYTTYSRK 57


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 292 ATYARSDARRQNRGHTTGQRRRVQGIGRTRHR 387
           AT A ++ +R++RG   G    +  +  TRH+
Sbjct: 324 ATPANNNDKRKSRGEVDGLGENMMDMSLTRHQ 355


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 586 STATQLPPAPADASVELTTKRSEPSPIPH 672
           S  + LPP P    +   T+++EPS   H
Sbjct: 480 SPMSSLPPYPNRTQITEVTQQTEPSIYQH 508


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 193 YAHKSDNDCPVKNCK 237
           Y H++ NDC V  C+
Sbjct: 64  YCHENINDCKVNPCE 78


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +2

Query: 320 DKIEAI---QRVNDGESKASVARDIGVPESTLRGWCKN 424
           D +EA+    R  D   +  VA  I +PES ++ W KN
Sbjct: 82  DVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKN 119


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 362 KASVARDIGVPESTLRGWCKN 424
           +  VA  I +PES ++ W KN
Sbjct: 157 REEVAVKINLPESRVQVWFKN 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,873
Number of Sequences: 336
Number of extensions: 2845
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)