Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0725
         (675 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486     30   1.9  
10_07_0054 - 12421618-12422025,12422230-12422308,12423076-12423107     29   2.6  
03_05_0867 - 28381891-28383018                                         29   2.6  
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482...    28   5.9  
02_05_1148 - 34458732-34460627,34462299-34462547                       28   5.9  
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235           28   7.8  
02_01_0393 - 2863335-2864534                                           28   7.8  
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    28   7.8  

>02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486
          Length = 296

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 571 ASIPTSTATQLPPAPADASVELTTKRSEPSPIPHV 675
           +S  T+T+   PPAPA A+  L    + P P+ H+
Sbjct: 210 SSSTTTTSASPPPAPATAATALDLNLNLPPPLAHL 244


>10_07_0054 - 12421618-12422025,12422230-12422308,12423076-12423107
          Length = 172

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 406 QSGLWHAYVSCDRCLGLSVVDPLYGLDFVAGRQSAHR 296
           QS LW   +    C G +  DP +GL  +AG  + H+
Sbjct: 10  QSDLWLLKMKKKSCHGRATHDPQHGLSKIAGESTKHQ 46


>03_05_0867 - 28381891-28383018
          Length = 375

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559 DLTAASIPTSTATQLPPAPADASVELTTKRSEPSPIP 669
           D TA  +P +     PPA A A+ +L  KR  P P P
Sbjct: 24  DPTAPLLPHADDPSAPPAAAAAARKLPVKRRSPPPRP 60


>06_03_1507 -
           30646168-30646254,30646350-30646490,30648109-30648202,
           30648445-30648509,30648934-30649176,30649442-30649499,
           30649957-30650037,30650323-30650533,30650975-30651141,
           30651216-30651268,30651600-30651681,30651765-30651914,
           30652027-30652111,30652189-30652393,30652502-30652573,
           30652911-30653456
          Length = 779

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 379 SCDRCLGLSVVDPLYGLDFVAGRQSAHRSLTLCCHNGHSL 260
           SC  C G +VV P Y  +  AG    H S  +   NG++L
Sbjct: 198 SCSSCKGRTVVSPYY-FEVHAGSTKKHPSDYIFLENGNNL 236


>02_05_1148 - 34458732-34460627,34462299-34462547
          Length = 714

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = +2

Query: 272 IMATKGKR-PMRALTPGDKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDKLRYMT 448
           +  TK K  P R   PG+  +   R+N      +  + + +     R   ++  +L +MT
Sbjct: 128 VCRTKWKELPFRGPLPGEFPQGSARINPVNGHQNGGQ-MTILRPLPRA--RSSGRLHHMT 184

Query: 449 SRLSSPDTDKS--NDGEPLE 502
           S L  PDTD+S  ND EPL+
Sbjct: 185 SLL--PDTDRSIFNDDEPLD 202


>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
          Length = 1293

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 7    RRPYHGERTVGSRGPRRTYLSVHRVTRVFA 96
            RRP H  R  G+R   RT  ++HR+  VFA
Sbjct: 1229 RRP-HARRVAGAREIGRTARTLHRLAAVFA 1257


>02_01_0393 - 2863335-2864534
          Length = 399

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 586 STATQLPPAPADASVELTTKRSEPSPIP 669
           S++T  P APA A+ EL   R +  P P
Sbjct: 54  SSSTSAPAAPAHATAELLQPRKDEPPAP 81


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 565 TAASIPTSTATQLPPAPADASVELTTKRSEPSP 663
           TAA  P S  +  PPAP   S    T  + PSP
Sbjct: 22  TAAPPPASNNSSSPPAPGSLSPPSLTPPAAPSP 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,041,593
Number of Sequences: 37544
Number of extensions: 343948
Number of successful extensions: 1456
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)