BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0725
(675 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 26 1.3
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 25 1.7
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 25 1.7
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 25 2.2
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 25 2.2
AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein. 25 2.9
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 3.8
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 25.8 bits (54), Expect = 1.3
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +3
Query: 312 RPATKSRPYNGSTTESPRHRSHET*ACQSPLCAAGARTRTNC---AT*RHDYRHPTRTRA 482
RP+T + + P+H S+ T P T +NC T H H RT A
Sbjct: 1236 RPSTLGPSVASTRLDGPQHHSYATIGPNCPRNCDNYDTVSNCKYNTTQHHQTHHERRTTA 1295
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 25.4 bits (53), Expect = 1.7
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 69 GASRYARLRSVTCERICEISDTCRALRIHT 158
G RY + R+ CE+ C ++ R + + T
Sbjct: 55 GHKRYCKYRACQCEKCCLTAERQRVMALQT 84
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 25.4 bits (53), Expect = 1.7
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 69 GASRYARLRSVTCERICEISDTCRALRIHT 158
G RY + R+ CE+ C ++ R + + T
Sbjct: 55 GHKRYCKYRACQCEKCCLTAERQRVMALQT 84
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 25.0 bits (52), Expect = 2.2
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 69 GASRYARLRSVTCERICEISDTCRALRIHT 158
G RY + R+ CE+ C ++ R + + T
Sbjct: 55 GHKRYCKYRTCHCEKCCLTAERQRVMALQT 84
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 25.0 bits (52), Expect = 2.2
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 69 GASRYARLRSVTCERICEISDTCRALRIHT 158
G RY + R+ CE+ C ++ R + + T
Sbjct: 55 GHKRYCKYRTCHCEKCCLTAERQRVMALQT 84
>AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein.
Length = 461
Score = 24.6 bits (51), Expect = 2.9
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 161 IFIGWDSSIQRTLIKAITTALSKIVNKTHAGCNKRVAIMAT 283
+ I W S+ + AI T S T A C +MAT
Sbjct: 298 VHIAWQFSVTVARVLAIATVASVFPLYTAAACAVHALLMAT 338
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.2 bits (50), Expect = 3.8
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +3
Query: 330 RPYNGSTTESPRHRSHET*AC-QSPLCAAG 416
R YNG SP H+ C + P C+ G
Sbjct: 2469 RSYNGPFRNSPEHKGSSQRNCSRGPPCSPG 2498
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,741
Number of Sequences: 2352
Number of extensions: 12125
Number of successful extensions: 44
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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