Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0725
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68010-2|CAA92010.2| 433|Caenorhabditis elegans Hypothetical pr... 31 0.99
AB236333-1|BAE45265.1| 433|Caenorhabditis elegans MBlk-1 Relate... 31 0.99
AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical ... 30 1.7
AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical ... 29 3.0
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 4.0
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 4.0
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 4.0
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 4.0
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 4.0
AC006603-5|AAF39745.1| 274|Caenorhabditis elegans Hypothetical ... 28 7.0
>Z68010-2|CAA92010.2| 433|Caenorhabditis elegans Hypothetical
protein T01C1.2 protein.
Length = 433
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 329 EAIQRVNDGESKASVARDI-GVPESTLRGWCKNEDKLRYMTSRLSSPDTDKSNDGEPL 499
EA++ V GE A GVP STL K + +R L S D+ S DG L
Sbjct: 350 EAVRSVRRGEMTVHRAGSFFGVPHSTLEYKVKERNLMRKKKDCLYSHDSSTSEDGSQL 407
>AB236333-1|BAE45265.1| 433|Caenorhabditis elegans MBlk-1 Related
factor-1 protein.
Length = 433
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 329 EAIQRVNDGESKASVARDI-GVPESTLRGWCKNEDKLRYMTSRLSSPDTDKSNDGEPL 499
EA++ V GE A GVP STL K + +R L S D+ S DG L
Sbjct: 350 EAVRSVRRGEMTVHRAGSFFGVPHSTLEYKVKERNLMRKKKDCLYSHDSSTSEDGSQL 407
>AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical
protein Y44A6D.3 protein.
Length = 229
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 320 DKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDKL 436
+K+ I + ++A+ R+ V ES++R W KNE+KL
Sbjct: 25 EKLAIISHAKNHGNRAA-GREFNVAESSIREWRKNENKL 62
>AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical
protein F48A11.5b protein.
Length = 627
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 278 ATKGKRPMRALTPGDKIEAIQRVNDGESKAS 370
AT+G+R RA+TP + +++DG S +S
Sbjct: 97 ATRGRRRGRAVTPDETTTVDNQIDDGSSSSS 127
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Frame = +2
Query: 248 AGCNKRVAIMATKGKRPMRALTPGDKIEAIQRV---------NDGESKASVARDIGVPES 400
AG + A + KG +P+ G +E+ RV N+GES AR G PE
Sbjct: 6413 AGQEQTRATLTVKGDQPLLNGHAGQAVESELRVTKHLGGEIVNNGESVTFEARVQGTPEE 6472
Query: 401 TLRGWCKNEDKLRYMTSRLSSPDTDKSNDGEPL 499
L W +N +L + T S DGE L
Sbjct: 6473 VL--WMRNGQEL------TNGDKTSISQDGETL 6497
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Frame = +2
Query: 248 AGCNKRVAIMATKGKRPMRALTPGDKIEAIQRV---------NDGESKASVARDIGVPES 400
AG + A + KG +P+ G +E+ RV N+GES AR G PE
Sbjct: 6942 AGQEQTRATLTVKGDQPLLNGHAGQAVESELRVTKHLGGEIVNNGESVTFEARVQGTPEE 7001
Query: 401 TLRGWCKNEDKLRYMTSRLSSPDTDKSNDGEPL 499
L W +N +L + T S DGE L
Sbjct: 7002 VL--WMRNGQEL------TNGDKTSISQDGETL 7026
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Frame = +2
Query: 248 AGCNKRVAIMATKGKRPMRALTPGDKIEAIQRV---------NDGESKASVARDIGVPES 400
AG + A + KG +P+ G +E+ RV N+GES AR G PE
Sbjct: 6623 AGQEQTRATLTVKGDQPLLNGHAGQAVESELRVTKHLGGEIVNNGESVTFEARVQGTPEE 6682
Query: 401 TLRGWCKNEDKLRYMTSRLSSPDTDKSNDGEPL 499
L W +N +L + T S DGE L
Sbjct: 6683 VL--WMRNGQEL------TNGDKTSISQDGETL 6707
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Frame = +2
Query: 248 AGCNKRVAIMATKGKRPMRALTPGDKIEAIQRV---------NDGESKASVARDIGVPES 400
AG + A + KG +P+ G +E+ RV N+GES AR G PE
Sbjct: 6413 AGQEQTRATLTVKGDQPLLNGHAGQAVESELRVTKHLGGEIVNNGESVTFEARVQGTPEE 6472
Query: 401 TLRGWCKNEDKLRYMTSRLSSPDTDKSNDGEPL 499
L W +N +L + T S DGE L
Sbjct: 6473 VL--WMRNGQEL------TNGDKTSISQDGETL 6497
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Frame = +2
Query: 248 AGCNKRVAIMATKGKRPMRALTPGDKIEAIQRV---------NDGESKASVARDIGVPES 400
AG + A + KG +P+ G +E+ RV N+GES AR G PE
Sbjct: 6942 AGQEQTRATLTVKGDQPLLNGHAGQAVESELRVTKHLGGEIVNNGESVTFEARVQGTPEE 7001
Query: 401 TLRGWCKNEDKLRYMTSRLSSPDTDKSNDGEPL 499
L W +N +L + T S DGE L
Sbjct: 7002 VL--WMRNGQEL------TNGDKTSISQDGETL 7026
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Frame = +2
Query: 248 AGCNKRVAIMATKGKRPMRALTPGDKIEAIQRV---------NDGESKASVARDIGVPES 400
AG + A + KG +P+ G +E+ RV N+GES AR G PE
Sbjct: 6623 AGQEQTRATLTVKGDQPLLNGHAGQAVESELRVTKHLGGEIVNNGESVTFEARVQGTPEE 6682
Query: 401 TLRGWCKNEDKLRYMTSRLSSPDTDKSNDGEPL 499
L W +N +L + T S DGE L
Sbjct: 6683 VL--WMRNGQEL------TNGDKTSISQDGETL 6707
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Frame = +2
Query: 248 AGCNKRVAIMATKGKRPMRALTPGDKIEAIQRV---------NDGESKASVARDIGVPES 400
AG + A + KG +P+ G +E+ RV N+GES AR G PE
Sbjct: 5832 AGQEQTRATLTVKGDQPLLNGHAGQAVESELRVTKHLGGEIVNNGESVTFEARVQGTPEE 5891
Query: 401 TLRGWCKNEDKLRYMTSRLSSPDTDKSNDGEPL 499
L W +N +L + T S DGE L
Sbjct: 5892 VL--WMRNGQEL------TNGDKTSISQDGETL 5916
>AC006603-5|AAF39745.1| 274|Caenorhabditis elegans Hypothetical
protein B0524.6 protein.
Length = 274
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 553 GLDLTAASIPTSTATQLPPAPADASVELTTKRSEPSPI 666
G L + P + ++LPP A+ + L T + P PI
Sbjct: 131 GFILASREGPPTLPSRLPPTAAEPKISLPTSKPPPIPI 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,763,184
Number of Sequences: 27780
Number of extensions: 275768
Number of successful extensions: 1026
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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