Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0724
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical ... 99 3e-21
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 38 0.010
Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical pr... 30 1.6
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 30 1.6
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 30 1.6
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 1.6
AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 28 6.4
U40943-4|AAK39236.1| 270|Caenorhabditis elegans Hypothetical pr... 28 6.4
U40943-3|AAM69117.1| 325|Caenorhabditis elegans Hypothetical pr... 28 6.4
U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical pr... 28 6.4
AJ012357-1|CAB41352.1| 371|Caenorhabditis elegans cyclic AMP-de... 28 6.4
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 6.4
>AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical
protein W08E12.7 protein.
Length = 391
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/86 (52%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +1
Query: 514 SAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTG 693
+AE+G PIE MLSHQL++ IDGEK IIQN E Q+ E EK ++K+E YA+D+L STG
Sbjct: 185 AAEFGLTPIENMLSHQLERNEIDGEKKIIQNSGEKQKGEIEKIKIDKHEAYAIDILFSTG 244
Query: 694 EAVGREMDTRCTIYKKTDEV-YQFKL 768
+ ++MDTR T+++K ++V YQ K+
Sbjct: 245 KGQPKDMDTRTTVFRKNEQVSYQLKM 270
Score = 90.6 bits (215), Expect = 1e-18
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +3
Query: 36 TIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDS 215
T+A D VVTKY++A +I N VL++V+A A A ++C+ GDKL+LE+T K++KKEK+
Sbjct: 22 TLANDAVVTKYQVAAEITNAVLKEVLANIKEGAIAGDLCDLGDKLILEKTGKLYKKEKNF 81
Query: 216 KKGIAFSTCVSVNTAFVTFRPLRA 287
KGIA TC+S++ + PL++
Sbjct: 82 TKGIAMPTCISIDNCICHYTPLKS 105
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Frame = +2
Query: 251 EHCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVG---ESEVSGRAADV 421
++CICH++P+ SE +LK G + K+DLG HIDG IA AHTVVVG +++V+G+ AD+
Sbjct: 94 DNCICHYTPLKSEAPVVLKNGQVVKVDLGTHIDGLIATAAHTVVVGASKDNKVTGKLADL 153
Query: 422 XXXXXXXXXXXXXXXKPGTENYAVTEAIQK 511
+P TEN +T+ I K
Sbjct: 154 LRGTHDALEIAIRSLRPDTENTTITKNIDK 183
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 254 HCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 379
HC H++P A + +L+ GD+ KID G H+ G + A TV
Sbjct: 191 HCAAHYTPNAGDTT-VLQYGDVCKIDYGIHVRGRLIDSAFTV 231
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/82 (29%), Positives = 40/82 (48%)
Frame = +1
Query: 523 YGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAV 702
Y KPI + H + Q+RI K++ P K E+ +E+ E+YA++ STG+
Sbjct: 284 YVVKPIRNLNGHSIAQYRIHAGKTV---PIV---KGGEQTKMEENEIYAIETFGSTGKGY 337
Query: 703 GREMDTRCTIYKKTDEVYQFKL 768
+ D + Y K E+ K+
Sbjct: 338 VHD-DMETSHYMKNFELADEKI 358
>Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical
protein F53B6.5 protein.
Length = 182
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +1
Query: 532 KPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAVGRE 711
KPI + + Q RI EK++ P K E+A +E+ E+YA++ STG+ +
Sbjct: 38 KPIGSLNGQSIAQCRIHTEKTV---PIV---KGGEQARMEENEIYAIETFGSTGKGYFHD 91
Query: 712 MDTRCTIYKKTDEVYQFKL 768
D + Y K E+ K+
Sbjct: 92 -DMETSHYMKNFELADEKI 109
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 208 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 71
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 208 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 71
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 208 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 71
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 400 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 442
>AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical
protein F54D12.10 protein.
Length = 152
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 743 VFLYIVHLVSISRPT-ASPVDIRTSIAYTSYFSSVAFSCSLRCASDGFCIILFSPSIRNC 567
+FL+ + ++S+ SPV+ TS ++ + SC RC CI++ S S+ C
Sbjct: 9 LFLFPITILSVFVSVRGSPVN-STSYVSKTFLNLTWKSCITRCVIVADCILVHSNSLNRC 67
Query: 566 F 564
+
Sbjct: 68 Y 68
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 659 SYFSSVAFSCSLRCASDGFC 600
+Y+++V F+CS +CA G C
Sbjct: 423 TYYNTVGFACSPKCACKGAC 442
>U40943-4|AAK39236.1| 270|Caenorhabditis elegans Hypothetical
protein F47F2.1a protein.
Length = 270
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = -2
Query: 289 FARNGRKVTNAV--FTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHF 116
+ R R +N++ F + + A+ ++ S + L N LS HI +AD F
Sbjct: 50 YLRASRSFSNSMARFYASEIVCALEYIHSLGIVYRDLKPENLMLSKEGHIKMADFG---F 106
Query: 115 AMTCSRTRFTICPANLYL 62
A +TIC YL
Sbjct: 107 AKELRDRTYTICGTPDYL 124
>U40943-3|AAM69117.1| 325|Caenorhabditis elegans Hypothetical
protein F47F2.1c protein.
Length = 325
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = -2
Query: 289 FARNGRKVTNAV--FTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHF 116
+ R R +N++ F + + A+ ++ S + L N LS HI +AD F
Sbjct: 105 YLRASRSFSNSMARFYASEIVCALEYIHSLGIVYRDLKPENLMLSKEGHIKMADFG---F 161
Query: 115 AMTCSRTRFTICPANLYL 62
A +TIC YL
Sbjct: 162 AKELRDRTYTICGTPDYL 179
>U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical
protein F47F2.1b protein.
Length = 398
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = -2
Query: 289 FARNGRKVTNAV--FTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHF 116
+ R R +N++ F + + A+ ++ S + L N LS HI +AD F
Sbjct: 178 YLRASRSFSNSMARFYASEIVCALEYIHSLGIVYRDLKPENLMLSKEGHIKMADFG---F 234
Query: 115 AMTCSRTRFTICPANLYL 62
A +TIC YL
Sbjct: 235 AKELRDRTYTICGTPDYL 252
>AJ012357-1|CAB41352.1| 371|Caenorhabditis elegans cyclic
AMP-dependent protein kinase,catalytic subunit protein.
Length = 371
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = -2
Query: 289 FARNGRKVTNAV--FTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHF 116
+ R R +N++ F + + A+ ++ S + L N LS HI +AD F
Sbjct: 151 YLRASRSFSNSMARFYASEIVCALEYIHSLGIVYRDLKPENLMLSKEGHIKMADFG---F 207
Query: 115 AMTCSRTRFTICPANLYL 62
A +TIC YL
Sbjct: 208 AKELRDRTYTICGTPDYL 225
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 472 RLQETKSRFTSMMSCQQNICSTSRDFTFTHNYCMSYNSYKSINVSTK 332
RL + S +T+ +C Q C T + T+T C+ N + +TK
Sbjct: 709 RLLSSWSEWTTTGTCNQTACGTCQTLTYTRT-CLKTNGCFCMGSATK 754
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,711,229
Number of Sequences: 27780
Number of extensions: 376319
Number of successful extensions: 1363
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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