Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0720
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 35 0.054
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical pr... 33 0.22
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 31 0.66
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 31 0.66
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 31 1.2
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 31 1.2
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC024847-3|AAF60854.1| 195|Caenorhabditis elegans Hypothetical ... 30 1.5
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 30 2.0
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 30 2.0
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 30 2.0
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z83239-3|CAB05810.1| 344|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z70307-14|CAA94338.2| 409|Caenorhabditis elegans Hypothetical p... 28 6.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 6.2
U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical pr... 28 6.2
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF047663-8|AAK84581.1| 114|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81473-8|CAB03899.2| 418|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical pr... 28 8.2
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL031636-1|CAA21046.2| 418|Caenorhabditis elegans Hypothetical ... 28 8.2
AF047657-9|AAK18945.1| 329|Caenorhabditis elegans Seven tm rece... 28 8.2
AC024847-2|AAO21415.1| 197|Caenorhabditis elegans Hypothetical ... 28 8.2
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 35.1 bits (77), Expect = 0.054
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 292 QVDEQLRIALEQLKNT---REKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSE 462
Q+ +QLR EQ N +K + +E E+ EE++ S S+N+D K +S L + SE
Sbjct: 765 QLQDQLREEKEQSSNLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISE 824
Query: 463 ALEINQKL 486
L+ N L
Sbjct: 825 LLKTNDLL 832
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 35.1 bits (77), Expect = 0.054
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 292 QVDEQLRIALEQLKNT---REKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSE 462
Q+ +QLR EQ N +K + +E E+ EE++ S S+N+D K +S L + SE
Sbjct: 765 QLQDQLREEKEQSSNLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISE 824
Query: 463 ALEINQKL 486
L+ N L
Sbjct: 825 LLKTNDLL 832
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 283 KSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSE 462
K ++ +EQL A+E+L + + D + ++ EQ+EEE+L+ +L ++L + E S
Sbjct: 110 KEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETST 169
Query: 463 A---LEINQKLQDTINT 504
A LE K D+ T
Sbjct: 170 AKTELEAVSKKLDSSET 186
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 283 KSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSE 462
K ++ +EQL A+E+L + + D + ++ EQ+EEE+L+ +L ++L + E S
Sbjct: 110 KEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETST 169
Query: 463 A---LEINQKLQDTINT 504
A LE K D+ T
Sbjct: 170 AKTELEAVSKKLDSSET 186
>Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical
protein C53D6.5 protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 313 IALEQLKNTREKYDILLQ-ESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQ 489
+++E + EK+ +L + +S + E K + +K+L++ F + +E LEI QKL+
Sbjct: 39 VSVEVKNDFEEKFRLLCELKSVEKETFEKQEEKKGDEYEKELNKFFRQRTEKLEIEQKLK 98
Query: 490 D 492
D
Sbjct: 99 D 99
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/78 (24%), Positives = 43/78 (55%)
Frame = +1
Query: 292 QVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALE 471
+ D+++R ++L+ T+E+ + + +NE+++ VI + +++QL Q +E +
Sbjct: 848 RTDDEIRAKDDELRATKERLLKMEHDFRENEKKLDQVIVERAVIQEQLQQESENSAELDD 907
Query: 472 INQKLQDTINTFFNAVMN 525
I +LQ T N ++N
Sbjct: 908 IRGRLQ-TRNQELEYIVN 924
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +1
Query: 301 EQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQ 480
EQ R +++ R + + E EEEML V + + K++ +L EH I Q
Sbjct: 574 EQERQKYQEMLTARSEETSVQAEPAGGEEEMLDVTKQIEEAKEEKIRLKAEHDANERIIQ 633
Query: 481 KLQDTINTF 507
+L D + F
Sbjct: 634 QLLDKLANF 642
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/70 (22%), Positives = 44/70 (62%)
Frame = +1
Query: 262 KMMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQ 441
K+M + + +++ +L ALE ++ ++ ++ + ++ EEE+++ +SK+ D ++QL Q
Sbjct: 905 KIMNKEMVD-ELNAKLGDALEGMEELKKSLEVSEAKVQRREEELIAQVSKHRDQQEQL-Q 962
Query: 442 LFIEHSEALE 471
L ++ ++ +
Sbjct: 963 LTLDELKSAQ 972
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 274 RSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEML 396
+S++ +E RIA E++KN + + L+QE E+ ML
Sbjct: 218 KSMQQYITNENKRIAREEMKNEKNRIQKLIQEDEEGYRAML 258
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +1
Query: 340 REKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIE-HSEALEINQ-KLQDTINT 504
+EKY+ L E++ E ++ + +KN DL ++S+ IE S L+ +LQ+T++T
Sbjct: 317 KEKYEDLKSEAKLLRERVVEMEAKNEDLDDRISKYEIEIRSNPLKKKAIQLQETLDT 373
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical protein
C04A11.3 protein.
Length = 1228
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +1
Query: 304 QLRIALEQLKNTREKYDILLQESEQNEEE--MLSVISKNTDLKKQLSQLFIEH 456
Q R+ +EQ K+ R + L QE + ++E MLS + + LK++ Q+ IEH
Sbjct: 909 QKRLRIEQEKDMRAFKERLKQEMKIFKQELTMLSKVQRKDALKQRKEQIEIEH 961
>AC024847-3|AAF60854.1| 195|Caenorhabditis elegans Hypothetical
protein Y65B4BR.5a protein.
Length = 195
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 316 ALEQLKNTREKYDILLQESEQNEE-EMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQD 492
A+E LK TRE + E ++NE+ E S + D++ +SQ ++A+ + L++
Sbjct: 125 AIENLKPTREAPQLKTVEEDENEDVEEDSTGIEEKDIELVISQANTTRNKAI---RALKE 181
Query: 493 TINTFFNAVMNFVI 534
N NA+M+ +
Sbjct: 182 ADNDIVNAIMSLTM 195
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 277 SIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEE--MLSVISKNTDLKKQLSQLFI 450
S +R++ L LEQ+K RE + ESE E E ++S +S T+ + L ++
Sbjct: 557 SESARRLSAGLSHYLEQVKKERESMEAQESESESMELEIPVVSEVSVTTE-SENLEEVVS 615
Query: 451 EHSEA 465
EHS++
Sbjct: 616 EHSDS 620
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 277 SIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEE--MLSVISKNTDLKKQLSQLFI 450
S +R++ L LEQ+K RE + ESE E E ++S +S T+ + L ++
Sbjct: 555 SESARRLSAGLSHYLEQVKKERESMEAQESESESMELEIPVVSEVSVTTE-SENLEEVVS 613
Query: 451 EHSEA 465
EHS++
Sbjct: 614 EHSDS 618
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 277 SIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEE--MLSVISKNTDLKKQLSQLFI 450
S +R++ L LEQ+K RE + ESE E E ++S +S T+ + L ++
Sbjct: 557 SESARRLSAGLSHYLEQVKKERESMEAQESESESMELEIPVVSEVSVTTE-SENLEEVVS 615
Query: 451 EHSEA 465
EHS++
Sbjct: 616 EHSDS 620
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 277 SIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEE--MLSVISKNTDLKKQLSQLFI 450
S +R++ L LEQ+K RE + ESE E E ++S +S T+ + L ++
Sbjct: 555 SESARRLSAGLSHYLEQVKKERESMEAQESESESMELEIPVVSEVSVTTE-SENLEEVVS 613
Query: 451 EHSEA 465
EHS++
Sbjct: 614 EHSDS 618
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +3
Query: 540 KITAELRHKLAEADDCISDLRSEL-CKLKEQQP-QSLYSELVQSEP 671
KIT E +K+ E +SDL++E K K+Q+P Q L E V+S P
Sbjct: 565 KITLEFANKVKETLAQLSDLKNEKPKKSKKQKPSQQLVPEKVKSNP 610
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 325 QLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQ 441
QLK R+KY+ L +E EEE + K L++ + Q
Sbjct: 426 QLKALRKKYEKLTKELRNEEEEKFNTRGKIATLRRTIEQ 464
>Z83239-3|CAB05810.1| 344|Caenorhabditis elegans Hypothetical
protein T09F5.3 protein.
Length = 344
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -2
Query: 504 GVNRILQLLIDLKSFTVFNEELRQLFFKVSILRDD*QHLLFIL 376
G+ L++ +LK F+V N L++ FFK + + LLF++
Sbjct: 218 GIRMHLRMGKELKQFSVTNRNLQKQFFKALVFQTLAPTLLFVV 260
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 259 FKMM-TRSIKSRQVDEQLRIAL---EQLKNTREKYDILLQESEQNEEEMLSVISKNTDLK 426
FKM+ TR+ K + V ++A E+++ T KY+ +++ ++ EE++ + + L+
Sbjct: 2091 FKMINTRAEKLKMVSTITKLAKKKREEVRKTMTKYEKGMEKMKRAEEQVAGMQGELLRLQ 2150
Query: 427 KQLSQLFIEHSEALEINQK 483
QL + IE S + +K
Sbjct: 2151 PQLVRTSIETSMLMSTIEK 2169
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 259 FKMM-TRSIKSRQVDEQLRIAL---EQLKNTREKYDILLQESEQNEEEMLSVISKNTDLK 426
FKM+ TR+ K + V ++A E+++ T KY+ +++ ++ EE++ + + L+
Sbjct: 2091 FKMINTRAEKLKMVSTITKLAKKKREEVRKTMTKYEKGMEKMKRAEEQVAGMQGELLRLQ 2150
Query: 427 KQLSQLFIEHSEALEINQK 483
QL + IE S + +K
Sbjct: 2151 PQLVRTSIETSMLMSTIEK 2169
>Z70307-14|CAA94338.2| 409|Caenorhabditis elegans Hypothetical
protein C39E9.12 protein.
Length = 409
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 528 CDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQSLYSELVQSEPSLVAVDT 692
CD L+ EL+ K A S+L+S L + Q + E ++ EP A+DT
Sbjct: 18 CDKLR--KELKKKRASTAGKKSELQSRLLEFLAGQNNAGNGEAIREEPEAEAMDT 70
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 262 KMMTRSIKSR-QVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLS 438
+ +T +++ R Q E R A + + T+E+ + L E E EEE + + +L+K L
Sbjct: 892 RKITEALEKRLQASESARDAPDDVMMTKERVEQLEGEIEWKEEECEGLKRRIRELEKALE 951
Query: 439 QLF--IEHSEALEINQKLQDTINTF 507
+ + +EA ++ + D + F
Sbjct: 952 AVAERADETEAAKLTTRQADVDSLF 976
>U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical
protein K07C11.9 protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +3
Query: 519 DEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQSLYSELVQSEPSLVAVDTAL 698
++F + K+ ++ LAE + D+ + + +L EQ+ Q L+S + +E + +D L
Sbjct: 261 NQFVEINKMAVQMPEGLAEPLKAVGDMLTSIHELTEQEKQ-LFSSICSAENLPIVLDECL 319
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 289 RQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEAL 468
+ ++E+LR+ E + R+KY +E+++ E LS +S +K++ +L E E
Sbjct: 37 KALEEELRVNFENARAARDKY---REETQKKLNETLSKVS--DAVKQRADELEKEKQEKA 91
Query: 469 EINQK 483
E +K
Sbjct: 92 EAKKK 96
>AF047663-8|AAK84581.1| 114|Caenorhabditis elegans Hypothetical
protein W09G12.5 protein.
Length = 114
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 583 IVFLTCGQSYVNLRNSSLRAYIRN 654
IVF+ CGQ+Y +LRN ++ A + +
Sbjct: 88 IVFVGCGQTYSDLRNLNVGAVVHS 111
>Z81473-8|CAB03899.2| 418|Caenorhabditis elegans Hypothetical
protein Y47H9A.1 protein.
Length = 418
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 343 EKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEH---SEALEINQKLQDTINTFFN 513
E YD+ LQ+ ++NEE M+ T K L L I ++ L K + ++TF N
Sbjct: 120 EPYDVYLQKKKRNEEGMIYWKFNLTSTGKVLETLVIRMVGINQTLNGGGKAEACLDTFEN 179
Query: 514 AV 519
+
Sbjct: 180 CM 181
>Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical
protein C17D12.3 protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 343 EKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEH---SEALEINQKLQDTINTFFN 513
E YD+ LQ+ ++NEE M+ T K L L I ++ L K + ++TF N
Sbjct: 120 EPYDVYLQKKKRNEEGMIYWKFNLTSTGKVLETLVIRMVGINQTLNGGGKAEACLDTFEN 179
Query: 514 AV 519
+
Sbjct: 180 CM 181
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/74 (27%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +1
Query: 241 IFYCNYFKMMTRSIKSRQVDEQLR-IAL--EQLKNTREKYDILLQESEQNEEEMLSVISK 411
+F C + M +++ ++EQ IA+ + L N++E+ L + E+ EE+ +V++
Sbjct: 235 LFACKERQKMEIEAQNQTLEEQRNHIAMLEKALANSQER----LAKREKKCEELSAVVAH 290
Query: 412 NTDLKKQLSQLFIE 453
+L+KQL++++ E
Sbjct: 291 ADELRKQLNEVWEE 304
>AL031636-1|CAA21046.2| 418|Caenorhabditis elegans Hypothetical
protein Y47H9A.1 protein.
Length = 418
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 343 EKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEH---SEALEINQKLQDTINTFFN 513
E YD+ LQ+ ++NEE M+ T K L L I ++ L K + ++TF N
Sbjct: 120 EPYDVYLQKKKRNEEGMIYWKFNLTSTGKVLETLVIRMVGINQTLNGGGKAEACLDTFEN 179
Query: 514 AV 519
+
Sbjct: 180 CM 181
>AF047657-9|AAK18945.1| 329|Caenorhabditis elegans Seven tm
receptor protein 39 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -2
Query: 504 GVNRILQLLIDLKSFTVFNEELRQLFFKVSILRDD*QHLLFIL 376
G+ Q+ +L+ F+V N +L+Q FFK +++ + F+L
Sbjct: 218 GLQMHFQMQKELQKFSVANRKLQQQFFKALVVQVTVPTITFVL 260
>AC024847-2|AAO21415.1| 197|Caenorhabditis elegans Hypothetical
protein Y65B4BR.5b protein.
Length = 197
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 316 ALEQLKNTREKYDILLQESEQNEEEMLSVIS---KNTDLKKQLSQLFIEHSEALEINQKL 486
A+E LK TRE + E ++NE+ S + D++ +SQ ++A+ + L
Sbjct: 125 AIENLKPTREAPQLKTVEEDENEDVEFKEDSTGIEEKDIELVISQANTTRNKAI---RAL 181
Query: 487 QDTINTFFNAVMNFVI 534
++ N NA+M+ +
Sbjct: 182 KEADNDIVNAIMSLTM 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,002,828
Number of Sequences: 27780
Number of extensions: 252786
Number of successful extensions: 1046
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -