Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0719
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10414-10|AAA19077.1|  176|Caenorhabditis elegans Hypothetical p...    30   1.7  
Z81043-8|CAB02804.2|  550|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U61237-1|AAB17542.1|  550|Caenorhabditis elegans M89 protein.          29   3.9  
AL023813-2|CAA19424.2|  550|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z79756-6|CAB02117.3|  693|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AC025726-25|AAK73927.2|  409|Caenorhabditis elegans Hypothetical...    28   8.9  

>U10414-10|AAA19077.1|  176|Caenorhabditis elegans Hypothetical
           protein F42A10.6 protein.
          Length = 176

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 150 WSWHLRVRAWLSTTTVTMQMRISACSSPVP 239
           WSW++    W S  T  +   I AC++ VP
Sbjct: 88  WSWNMATCGWSSVPTFGLLNNIDACTNGVP 117


>Z81043-8|CAB02804.2|  550|Caenorhabditis elegans Hypothetical
           protein C29F3.2 protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 279 LHNADSFTQTDRHLLFAGRC 338
           L N +SFT T++HL+FA  C
Sbjct: 400 LENGESFTLTEKHLVFATDC 419


>U61237-1|AAB17542.1|  550|Caenorhabditis elegans M89 protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 279 LHNADSFTQTDRHLLFAGRC 338
           L N +SFT T++HL+FA  C
Sbjct: 400 LENGESFTLTEKHLVFATDC 419


>AL023813-2|CAA19424.2|  550|Caenorhabditis elegans Hypothetical
           protein C29F3.2 protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 279 LHNADSFTQTDRHLLFAGRC 338
           L N +SFT T++HL+FA  C
Sbjct: 400 LENGESFTLTEKHLVFATDC 419


>Z79756-6|CAB02117.3|  693|Caenorhabditis elegans Hypothetical
           protein F53C11.2 protein.
          Length = 693

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 244 RVPHIFAGAAAGYIMQTPSHKRIDIFYSLVGVALFVASGAII 369
           RVP  F G   GY + T +  R+   +S+      VASG  +
Sbjct: 507 RVPSFFIGIFVGYFLATFTKTRLKFHWSVTIFGWVVASGIAV 548


>AC025726-25|AAK73927.2|  409|Caenorhabditis elegans Hypothetical
           protein Y71G12B.26 protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 455 IAPLMMANEALAKFLSLISLLP*CWN 378
           + P +  ++AL  FL++++LLP  WN
Sbjct: 163 VTPSLEISQALCGFLAILTLLPVIWN 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,884,859
Number of Sequences: 27780
Number of extensions: 376384
Number of successful extensions: 979
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)