Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0716
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    24   6.0  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    24   6.0  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.9  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.9  

>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 249 IRVDHSC--YISRPVLEDSAERIWHYQHDARLCELLRC 356
           ++  H C  Y++ P        +++Y +DA+  ++LRC
Sbjct: 34  VQAQHECVTYLNLPKHRLYQYLMYNYSNDAKTKQMLRC 71


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 249 IRVDHSC--YISRPVLEDSAERIWHYQHDARLCELLRC 356
           ++  H C  Y++ P        +++Y +DA+  ++LRC
Sbjct: 34  VQAQHECVTYLNLPKHRLYQYLMYNYSNDAKTKQMLRC 71


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 120 CTAISRNCCQRRKAEIWPKR 179
           CT + RNCC R++ +  P++
Sbjct: 95  CTRL-RNCCTRQRKDFNPRK 113


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 120 CTAISRNCCQRRKAEIWPKR 179
           CT + RNCC R++ +  P++
Sbjct: 95  CTRL-RNCCTRQRKDFNPRK 113


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +1

Query: 430  GDFPDILALLRAYRPRSINPLDEVPSSSALLL*TVNTSSRSTVATSPSQETVAT 591
            GD   + A  + Y P + + +  +P++  LLL    T   + V  + +    AT
Sbjct: 1071 GDVELVSAFRQLYGPAASDAIASIPAAVPLLLEVTTTVDHTPVTAAVAVAEAAT 1124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,989
Number of Sequences: 2352
Number of extensions: 15790
Number of successful extensions: 76
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)