Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0716
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 30 1.6
AL032640-2|CAA21643.2| 502|Caenorhabditis elegans Hypothetical ... 29 3.7
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 29 4.9
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF099913-15|AAC68744.1| 284|Caenorhabditis elegans Hypothetical... 28 6.4
Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETSR 627
E PSSS + T T++ T +T PS T TTT+ ET+R
Sbjct: 317 EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTR 361
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVAT-SPSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T SPS T TTT+ ET+
Sbjct: 225 EPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETT 268
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVAT-SPSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T SPS T TTT+ ET+
Sbjct: 501 EPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETT 544
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETSRC*SNFKTESP 657
E PSSS + T T++ T +T PS T TTT+ ET+ S + +P
Sbjct: 202 EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTP 256
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVAT-SPSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T +PS T TTT+ ET+
Sbjct: 87 EPPSSSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETT 130
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 110 EAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAPETT 153
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVAT-SPSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T +PS T TTT+ ET+
Sbjct: 133 EPPSSSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETT 176
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 156 EAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAPETT 199
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 248 ESPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETT 291
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 432 EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETT 475
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 524 ESPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETT 567
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 547 EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETT 590
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 570 EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETT 613
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 593 EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETT 636
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 616 EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETT 659
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 639 EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETT 682
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 496 EVPSSSALLL*TVNTSSRSTVATS-PSQETVATYWRTTTSIETS 624
E PSSS + T T++ T +T PS T TTT+ ET+
Sbjct: 179 EPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETT 222
>AL032640-2|CAA21643.2| 502|Caenorhabditis elegans Hypothetical
protein Y43F8A.2 protein.
Length = 502
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 122 YSNIQKLLPTQESRDLAEAIHSYVQKKLRNQKCDDEKELRVV 247
Y +I KLL + +D AE + YV+ L+ QK DD+ L V+
Sbjct: 151 YPHISKLL--YKPKDGAEESYFYVKSSLQFQKSDDKHVLNVL 190
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +1
Query: 487 PLDEVPSSSALLL*TVNTSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKT-ESPRL 663
P + VP+ T S +T+ T+ +Q T T + TTT+ + + KT + P
Sbjct: 301 PAETVPAPKTTTTTTTTVPSTTTITTTTTQRT--TPYTTTTTTTAAPTTTTMKTIKYPIQ 358
Query: 664 LFWKIRAEYHRIERKWTGYSKRSFQRIP 747
K + Y + W Y +R F P
Sbjct: 359 EVKKEKKNYESYYKNWKPY-RRPFDLNP 385
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +1
Query: 487 PLDEVPSSSALLL*TVNTSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKT-ESPRL 663
P + VP+ T S +T+ T+ +Q T T + TTT+ + + KT + P
Sbjct: 301 PAETVPAPKTTTTTTTTVPSTTTITTTTTQRT--TPYTTTTTTTAAPTTTTMKTIKYPIQ 358
Query: 664 LFWKIRAEYHRIERKWTGYSKRSFQRIP 747
K + Y + W Y +R F P
Sbjct: 359 EVKKEKKNYESYYKNWKPY-RRPFDLNP 385
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 469 RPRSINP-LDEVPSSSALLL*TVNTSSRSTVATSPSQETVATYWRTTTSIET 621
+P + P L+ V SSS + V+TSS S ++P QET T TT + E+
Sbjct: 992 QPARVTPTLETVLSSSTM----VSTSSESDSESAPEQETEPTVPSTTETTES 1039
>AF099913-15|AAC68744.1| 284|Caenorhabditis elegans Hypothetical
protein C29F9.1 protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 353 LPQAQLSPLRLLLERQRGASSNSCTPV 433
+PQA + P+RL E A ++SC PV
Sbjct: 58 VPQALIEPIRLHREEDELAGTSSCRPV 84
>Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 500 CRLAPRCCCERSTHLHVRRSPPHLPRKLSLRIGARPR 610
C+L +CC E+ T + ++PP P++ G++ R
Sbjct: 297 CKLLWKCCIEQHTFFRL-KTPPKTPQRKVFNFGSKFR 332
>Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 500 CRLAPRCCCERSTHLHVRRSPPHLPRKLSLRIGARPR 610
C+L +CC E+ T + ++PP P++ G++ R
Sbjct: 297 CKLLWKCCIEQHTFFRL-KTPPKTPQRKVFNFGSKFR 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,188,760
Number of Sequences: 27780
Number of extensions: 349262
Number of successful extensions: 1160
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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