Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0716
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.2  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   9.6  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -2

Query: 647 VLKLD*QREVSIDVVVRQYVATVSWEGEVATVEREDVLTVHNNSAELDG 501
           V+K D  R + ID+  +Q  +   WE E+  + +   L    N  +L+G
Sbjct: 360 VIKHDILRMLIIDLRKKQLKSLEDWENEMNIITKGKPLIRVENIIDLEG 408


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 319  INTTPDFANFFAAPSSIKSA 378
            +N  PD  N +A P+  KSA
Sbjct: 1467 LNHYPDLHNLYAVPTDKKSA 1486


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = +2

Query: 494 MKCRLAPRCCCERSTHLHVRRSPPHLPRKL 583
           +KC +      +++  + V+++  HLPR +
Sbjct: 59  LKCFMTKHGILDKNAEVDVQKALRHLPRSM 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,756
Number of Sequences: 438
Number of extensions: 4290
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)