Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0716
         (774 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g51760.1 68418.m06418 protein phosphatase 2C, putative / PP2C...    28   6.0  
At4g17330.1 68417.m02600 agenet domain-containing protein contai...    28   6.0  
At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /...    28   6.0  
At5g14520.1 68418.m01702 pescadillo-related similar to pescadill...    28   7.9  
At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related...    28   7.9  

>At5g51760.1 68418.m06418 protein phosphatase 2C, putative / PP2C,
           putative contains PF00481: Protein phosphatase 2C
           domain; similar to protein phosphatase 2C (GI:10432446)
           [Nicotiana tabacum]
          Length = 416

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 697 IERKWTGYSKRSFQRIPD 750
           +ERKW G  KRSF+R+ +
Sbjct: 188 VERKWRGVMKRSFKRMDE 205


>At4g17330.1 68417.m02600 agenet domain-containing protein contains
           Pfam PF05641: Agenet domain
          Length = 1058

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = -1

Query: 486 VDATRSVGSEKGQDVREITGVQLFEEAP 403
           +DA +++ + K +D++E + V++F+E P
Sbjct: 580 IDAQQTIKATKNEDIKEGSNVEVFKEEP 607


>At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /
           phosphoglyceride transfer family protein contains Pfam
           PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
           CRAL/TRIO, N-terminus; similar to SEC14-like protein 2
           (Alpha-tocopherol associated protein) (TAP) (bTAP)
           (Fragment) (SP:P58875)  {Bos taurus}
          Length = 683

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
 Frame = +1

Query: 253 ELITAVTSLVQFL--RTQLNEFGI--INTTPDFANFFAAPSSIKSAPSLAGEATWSFFKQ 420
           E+ +    L +FL  R Q  E  +  ++ +P+  + F   S  ++AP L   A W F K+
Sbjct: 439 EIFSDKEKLSKFLKWRIQFQEKCVRSLDFSPEAKSSFVFVSDFRNAPGLGQRALWQFIKR 498

Query: 421 L---YSGDFPDILA 453
               +  ++P+ +A
Sbjct: 499 AVKQFEDNYPEFVA 512


>At5g14520.1 68418.m01702 pescadillo-related similar to pescadillo
           [Zebrafish, Danio rerio] SWISS-PROT:P79741
          Length = 590

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = -2

Query: 644 LKLD*QREV---SIDVVVRQYVATVSWEGEVATVEREDVLTVHN 522
           LK    REV   S+ +V+  +   VSWEGE A  + +D    H+
Sbjct: 340 LKFFLSREVPRESLQLVITAFGGMVSWEGEGAPFKEDDESITHH 383


>At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related
           protein 2 (PAKRP2) identical to cDNA
           phragmoplast-associated kinesin-related protein 2
           (PAKRP2) GI:16973450
          Length = 869

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/54 (27%), Positives = 30/54 (55%)
 Frame = +2

Query: 86  VPEKILEVTQILYSNIQKLLPTQESRDLAEAIHSYVQKKLRNQKCDDEKELRVV 247
           + EK+ E TQ+L S + K L  +E R +AE      ++++  +    ++EL ++
Sbjct: 449 IKEKVNERTQLLKSELDKKL--EECRRMAEEFVEMERRRMEERIVQQQEELEMM 500


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,241,133
Number of Sequences: 28952
Number of extensions: 330370
Number of successful extensions: 980
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)