Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0715
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61950-4|AAC24287.2|  303|Caenorhabditis elegans Hypothetical pr...    33   0.19 
L14710-4|AAK84537.3|  526|Caenorhabditis elegans Hypothetical pr...    31   0.78 
AF039035-3|AAB94163.1|  349|Caenorhabditis elegans Hypothetical ...    30   1.4  
U64847-6|AAB04875.1|  380|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF068708-5|AAK68200.1|  628|Caenorhabditis elegans P granule abn...    29   4.2  
AF068708-4|AAC17755.1|  693|Caenorhabditis elegans P granule abn...    29   4.2  
AB120729-1|BAC87886.1|  693|Caenorhabditis elegans PGL-3 protein.      29   4.2  
U97002-10|AAB52266.1|  322|Caenorhabditis elegans Hypothetical p...    28   5.5  
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla...    28   5.5  
AF016421-1|AAC25793.1|  335|Caenorhabditis elegans Hypothetical ...    28   5.5  
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ...    28   5.5  
Z70311-5|CAA94378.2|  527|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>U61950-4|AAC24287.2|  303|Caenorhabditis elegans Hypothetical
           protein C45E5.1 protein.
          Length = 303

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +3

Query: 111 KFLDSFDHVLSDCDGVIWTQD-SLPRVGEFFKQ-MKKRGKTVNFVSNNSLDP-EQIMK 275
           + L +FD  + D DGV+WT D  +P   E+    +    K+V   +NNS    EQ MK
Sbjct: 10  QLLSNFDTFVFDADGVLWTGDIPIPGAAEWINTLLDDPEKSVFITTNNSTKTLEQYMK 67


>L14710-4|AAK84537.3|  526|Caenorhabditis elegans Hypothetical
           protein K02D10.1a protein.
          Length = 526

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +3

Query: 108 HKFLDSFDHVLSDCDGVIWTQD-SLPRVGEFFK-QMKKRGKTVNFVSNNSLDP-EQIMK 275
           ++ L ++D  L D DGV+WT D  +P   E+    ++   K V  ++NNS    EQ MK
Sbjct: 9   NELLANYDTFLFDADGVLWTGDIPVPGAIEWINLLLEDPSKKVFVLTNNSTKTLEQYMK 67


>AF039035-3|AAB94163.1|  349|Caenorhabditis elegans Hypothetical
           protein C53A3.2 protein.
          Length = 349

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 84  LDLSVEDLHKFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNS 251
           L L  +   K + + D  + D DGV+W  +S +P        + K  K +  ++NN+
Sbjct: 42  LPLDPKSFSKVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNA 98


>U64847-6|AAB04875.1|  380|Caenorhabditis elegans Hypothetical
           protein F08F3.8 protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 293 SIDNGFESLIIPSIAVAEYLK 355
           +IDNGFE +++P +  A Y K
Sbjct: 50  AIDNGFEQILVPKVCAANYDK 70


>AF068708-5|AAK68200.1|  628|Caenorhabditis elegans P granule
           abnormality protein 3,isoform b protein.
          Length = 628

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +3

Query: 30  QKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHV 137
           +KKSL  L  +  +SK+LL  S +   + LDS DHV
Sbjct: 338 EKKSLNQLQFLSPKSKNLLVDSFKKFAQGLDSKDHV 373


>AF068708-4|AAC17755.1|  693|Caenorhabditis elegans P granule
           abnormality protein 3,isoform a protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +3

Query: 30  QKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHV 137
           +KKSL  L  +  +SK+LL  S +   + LDS DHV
Sbjct: 403 EKKSLNQLQFLSPKSKNLLVDSFKKFAQGLDSKDHV 438


>AB120729-1|BAC87886.1|  693|Caenorhabditis elegans PGL-3 protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +3

Query: 30  QKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHV 137
           +KKSL  L  +  +SK+LL  S +   + LDS DHV
Sbjct: 403 EKKSLNQLQFLSPKSKNLLVDSFKKFAQGLDSKDHV 438


>U97002-10|AAB52266.1|  322|Caenorhabditis elegans Hypothetical
           protein K09H11.7 protein.
          Length = 322

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 111 KFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNS 251
           K + + D  + D DGV+W  +S +P        + K  K +  ++NN+
Sbjct: 24  KVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNA 71


>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
           protein 8 protein.
          Length = 1206

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 359 VTFNKTVYCVTCTETKRVLEAHGFKCKE 442
           +TFN  +Y   C ET+R+L  +G +  E
Sbjct: 10  LTFNVLIYLAACQETERILANNGTEDNE 37


>AF016421-1|AAC25793.1|  335|Caenorhabditis elegans Hypothetical
           protein F44E7.2 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 111 KFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNS 251
           K + + D  + D DGV+W  +S +P        + K  K +  ++NN+
Sbjct: 41  KVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNA 88


>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1152

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 359 VTFNKTVYCVTCTETKRVLEAHGFKCKE 442
           +TFN  +Y   C ET+R+L  +G +  E
Sbjct: 10  LTFNVLIYLAACQETERILANNGTEDNE 37


>Z70311-5|CAA94378.2|  527|Caenorhabditis elegans Hypothetical
           protein T25B9.7 protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 618 DGAHENWSFGFKDGSFYRSGYG 683
           +G  +N++FG++D +FYR   G
Sbjct: 65  NGVGKNYTFGYEDPNFYRKNAG 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,434,549
Number of Sequences: 27780
Number of extensions: 286223
Number of successful extensions: 832
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)