Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0714
(544 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 99 2e-21
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 99 2e-21
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 98 3e-21
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 97 7e-21
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 96 1e-20
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 89 2e-18
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 84 7e-17
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 84 7e-17
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 79 1e-15
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 66 1e-11
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 45 4e-05
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 39 0.002
At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 33 0.16
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 32 0.28
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 31 0.38
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 31 0.50
At1g79350.1 68414.m09247 DNA-binding protein, putative contains ... 31 0.50
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 31 0.66
At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /... 29 2.7
At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containi... 29 2.7
At1g04930.1 68414.m00490 hydroxyproline-rich glycoprotein family... 29 2.7
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 28 3.5
At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family... 28 3.5
At2g16595.1 68415.m01904 translocon-associated protein (TRAP), p... 28 3.5
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 28 3.5
At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp... 28 3.5
At5g60030.1 68418.m07527 expressed protein 28 4.6
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 28 4.6
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 28 4.6
At2g32590.1 68415.m03979 barren family protein low similarity to... 28 4.6
At5g13370.1 68418.m01540 auxin-responsive GH3 family protein sim... 27 6.1
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 6.1
At2g06990.1 68415.m00800 HUA enhancer 2 (HEN2) / DExH-box RNA he... 27 6.1
At1g70250.1 68414.m08082 receptor serine/threonine kinase, putat... 27 6.1
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 27 6.1
At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family... 27 6.1
At5g66750.1 68418.m08414 SNF2 domain-containing protein / helica... 27 8.1
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 8.1
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 8.1
At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein ... 27 8.1
At5g16030.1 68418.m01874 expressed protein 27 8.1
At5g08480.2 68418.m01002 VQ motif-containing protein contains PF... 27 8.1
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 27 8.1
At3g28770.1 68416.m03591 expressed protein 27 8.1
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 27 8.1
At2g25320.1 68415.m03029 meprin and TRAF homology domain-contain... 27 8.1
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 27 8.1
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 27 8.1
At1g67230.1 68414.m07652 expressed protein 27 8.1
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/85 (50%), Positives = 64/85 (75%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDT 181
MV EAEKY++ED++ K+ +AKNALE+Y ++M+ T++DEK+ EK+ ++K+ I D
Sbjct: 524 MVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQA 583
Query: 182 IKWLDSNQLAEKEEYEHKQKELEGI 256
I+WL+ NQLAE +E+E K KELE I
Sbjct: 584 IQWLEGNQLAEADEFEDKMKELESI 608
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 98.7 bits (235), Expect = 2e-21
Identities = 42/85 (49%), Positives = 67/85 (78%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDT 181
MV +AEKY+ ED++ K+ +AKN+LE+Y ++M+ T++DEKL +K++ +KQ I ++T
Sbjct: 523 MVQDAEKYKAEDEQVKKKVEAKNSLENYAYNMRNTIKDEKLAQKLTQEDKQKIEKAIDET 582
Query: 182 IKWLDSNQLAEKEEYEHKQKELEGI 256
I+W++ NQLAE +E+E+K KELEGI
Sbjct: 583 IEWIEGNQLAEVDEFEYKLKELEGI 607
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 98.3 bits (234), Expect = 3e-21
Identities = 41/85 (48%), Positives = 63/85 (74%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDT 181
MV EAEKY++ED++ K+ +AKNALE+Y ++M+ T+ DEK+ EK+ ++K+ + D +
Sbjct: 524 MVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEA 583
Query: 182 IKWLDSNQLAEKEEYEHKQKELEGI 256
I+WLD NQL E +E+E K KELE +
Sbjct: 584 IQWLDGNQLGEADEFEDKMKELESV 608
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 97.1 bits (231), Expect = 7e-21
Identities = 43/85 (50%), Positives = 63/85 (74%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDT 181
MV EAEKY++ED++ K+ AKNALE+Y ++M+ T+ DEK+ EK++ +K+ I D
Sbjct: 524 MVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAA 583
Query: 182 IKWLDSNQLAEKEEYEHKQKELEGI 256
I+WL++NQLAE +E+E K KELE I
Sbjct: 584 IEWLEANQLAECDEFEDKMKELESI 608
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 96.3 bits (229), Expect = 1e-20
Identities = 42/85 (49%), Positives = 62/85 (72%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDT 181
MV EAEKY+ ED++ K+ AKNALE+Y ++M+ T++DEK+ K+ ++K+ I D +
Sbjct: 524 MVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIASKLDAADKKKIEDAIDQA 583
Query: 182 IKWLDSNQLAEKEEYEHKQKELEGI 256
I+WLD NQLAE +E+E K KELE +
Sbjct: 584 IEWLDGNQLAEADEFEDKMKELESL 608
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 88.6 bits (210), Expect = 2e-18
Identities = 39/85 (45%), Positives = 60/85 (70%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDT 181
MV EAEKY++ED++ K+ +AKN LE+Y +++ T+ D + EK+ ++K+ D +
Sbjct: 524 MVQEAEKYKSEDEEHKKKVEAKNGLENYAYNVGNTLRD--MGEKLPAADKKKFEDSIEEV 581
Query: 182 IKWLDSNQLAEKEEYEHKQKELEGI 256
I+WLD NQLAE +E+EHK KELE +
Sbjct: 582 IQWLDDNQLAEADEFEHKMKELESV 606
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 83.8 bits (198), Expect = 7e-17
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMED-EKLQEKISDSEKQTILDKCND 178
MV EAE++ ED K KE A+NALE+Y ++MK + D +KL +K+ EK+ I +
Sbjct: 549 MVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKE 608
Query: 179 TIKWLDSNQLAEKEEYEHKQKELEGI 256
++WLD NQ +EKEEY+ K KE+E +
Sbjct: 609 ALEWLDENQNSEKEEYDEKLKEVEAV 634
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 83.8 bits (198), Expect = 7e-17
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMED-EKLQEKISDSEKQTILDKCND 178
MV EAE++ ED K KE A+NALE+Y ++MK + D +KL +K+ EK+ I +
Sbjct: 549 MVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKE 608
Query: 179 TIKWLDSNQLAEKEEYEHKQKELEGI 256
++WLD NQ +EKEEY+ K KE+E +
Sbjct: 609 ALEWLDENQNSEKEEYDEKLKEVEAV 634
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 79.4 bits (187), Expect = 1e-15
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMED-EKLQEKISDSEKQTILDKCND 178
M+ EAE++ ED KE A+N LE+Y ++MK T+ D EKL +KISD +K+ + +
Sbjct: 563 MIREAEEFAEEDKIMKEKIDARNKLETYVYNMKSTVADKEKLAKKISDEDKEKMEGVLKE 622
Query: 179 TIKWLDSNQLAEKEEYEHKQKELE 250
++WL+ N AEKE+Y+ K KE+E
Sbjct: 623 ALEWLEENVNAEKEDYDEKLKEVE 646
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 66.1 bits (154), Expect = 1e-11
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +2
Query: 50 ETFQAKNALESYCFSMKFTMED-EKLQEKISDSEKQTILDKCNDTIKWLDSNQLAEKEEY 226
E A+NALE+Y ++MK + D +KL +K+ EK+ I + ++WLD NQ +EKEEY
Sbjct: 510 EKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEY 569
Query: 227 EHKQKELEGI 256
+ K KE+E +
Sbjct: 570 DEKLKEVEAV 579
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 32 EDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKWL-DSNQL 208
+D +ET KNA+ESY + M+ + D K QE I+DSE++ L + WL + +
Sbjct: 612 QDRVMEETKDRKNAVESYVYDMRNKLSD-KYQEYITDSEREAFLANLQEVEDWLYEDGED 670
Query: 209 AEKEEYEHKQKELEGI 256
K Y K +EL+ +
Sbjct: 671 ETKGVYVAKLEELKKV 686
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 EKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKWL- 193
E +D +++ T + KN LESY ++ K +E + ++ + E++ ++K ++ WL
Sbjct: 647 EALDKKDRERRRTAELKNNLESYIYATKEKLETPEFEKISTQEERKAFVEKLDEVQDWLY 706
Query: 194 DSNQLAEKEEYEHKQKELEGI 256
+ A E+E + L+ I
Sbjct: 707 MDGEDANATEFEKRLDSLKAI 727
>At1g11660.1 68414.m01339 heat shock protein, putative strong
similarity to gb|Z70314 heat-shock protein from
Arabidopsis thaliana and is a member of the PF|00012
Hsp70 protein family
Length = 773
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 32 EDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKWL 193
+D K + T KNALES+ + M+ M + + ++SE++ I +T +WL
Sbjct: 581 QDLKMESTKDKKNALESFVYEMRDKMLN-TYRNTATESERECIARNLQETEEWL 633
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 104 TMEDEKLQ-EKISDSEKQTILDKCNDTIKWLDSNQLAEKEEYEHKQKELEGITIR 265
T+ D ++ E + K +LD+C+ +WL ++ + EL+ IR
Sbjct: 679 TIADNRMAAESLPPPRKNAVLDECHKAERWLHEKTTEQESLPKDANPELQSAEIR 733
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 31.9 bits (69), Expect = 0.28
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 107 MEDEKLQEKI--SDSEKQTILDKCNDTIKWLDSNQLAEKEEYEHKQKELEGITIR*LRRC 280
M + L+EK+ S ++ T+L++C ++W D +Q +K++ E +KELE + + +
Sbjct: 247 MPPKDLKEKLRKSAADLTTVLERCLHRLEW-DRSQEQQKKK-EEDEKELERVQMAMIDWH 304
Query: 281 TRVPEESPEVCRASRAEHPEPEVPPP 358
V ES + A+ + E+PPP
Sbjct: 305 DFVVVESIDF-----ADEEDEELPPP 325
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 281 TRVPEESPEVCRASRAEHPEPEVPPPG-LEALAPPSRRSIKP 403
+R P S + SR P P +PPP L PP+R P
Sbjct: 521 SRAPSSSAKRASGSRGRRPRPPLPPPARARPLPPPARARPMP 562
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 31.1 bits (67), Expect = 0.50
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 320 SRAEHPEPEVPPPGLEALAPPSRRSIK-PTFHTTLKPTCNNHL 445
S A HP P PPP P + S+ PT + KP N H+
Sbjct: 108 STASHPPPAPPPPASLPTFPANISSLLFPTHNKQSKPPSNGHI 150
>At1g79350.1 68414.m09247 DNA-binding protein, putative contains
Pfam PF00628: PHD-finger domain; contains TIGRFAMS
TIGR01053: zinc finger domain, LSD1 subclass; contains
Pfam PF00271: Helicase conserved C-terminal domain;
similar to WSSV086 (GI:19481678)[shrimp white spot
syndrome virus]; similar to nuclear protein Np95
(GI:17939938) [Mus musculus]
Length = 1299
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 302 PEVCRASRAEHPE-PEVPPPGLEALAPPSRRSIKP 403
PE+ +R + P+ P+ PP ++ L PP ++ +KP
Sbjct: 61 PELLSRARPQFPQSPQQPPQPIQTLPPPIQQQLKP 95
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 30.7 bits (66), Expect = 0.66
Identities = 25/113 (22%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +2
Query: 5 VNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTI 184
+ E E+ + E D +E + +N + F + ++ L+ K+ +++ + + +
Sbjct: 408 IEELERQKVEIDHSEEKLEKRNQAMNKKFD-RVNEKEMDLEAKLKTIKEREKIIQAEEKR 466
Query: 185 KWLDSNQL-AEKEEYEHKQKELEGITIR*LRRCTRVPEE--SPEVCRASRAEH 334
L+ QL ++KE E Q+E+E I ++ + EE S E+ + R E+
Sbjct: 467 LSLEKQQLLSDKESLEDLQQEIEKIRAEMTKKEEMIEEECKSLEIKKEEREEY 519
>At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to polyphosphoinositide binding
protein Ssh2, Glycine max, gb:T05953; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 668
Score = 28.7 bits (61), Expect = 2.7
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 1/118 (0%)
Frame = +2
Query: 104 TMEDEKLQEKISDSEKQTILDKCNDTIKWLDSNQLAEKEEYEHK-QKELEGITIR*LRRC 280
T+E E L DSE+ + +T K N AE E H+ E E + L
Sbjct: 73 TLESEGLNHAAEDSEQTHEVTPETETAKLEVLNHTAEDSEQTHEVTPEKETVKSEFLNHV 132
Query: 281 TRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 454
E++ EV E + EV E P R + PT T + LVTS
Sbjct: 133 AEDSEQTHEV--TPETETVKSEVLNHAAEDSEQP--RGVTPTPETETSEADTSLLVTS 186
>At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 743
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 68 NALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKWLDSNQLAEKEEYEHKQKEL 247
N L CF + ++E KL E++ + + N ++KWL + ++E K KEL
Sbjct: 349 NTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEE--KREAVTRKVKEL 406
>At1g04930.1 68414.m00490 hydroxyproline-rich glycoprotein family
protein Common family member: At2g32840 [Arabidopsis
thaliana]
Length = 332
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 335 PEPEVPPPGLEALAPPSRRSIKPTFH 412
P P PPP L PP+ R I P H
Sbjct: 34 PPPSQPPPAPPPLPPPTYRPIAPLRH 59
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 28.3 bits (60), Expect = 3.5
Identities = 27/99 (27%), Positives = 43/99 (43%)
Frame = +2
Query: 110 EDEKLQEKISDSEKQTILDKCNDTIKWLDSNQLAEKEEYEHKQKELEGITIR*LRRCTRV 289
EDEK EK+ SE+++ + + K S+Q KEE ++K+ E +
Sbjct: 297 EDEK--EKVQSSEEESKVKESGKNEKDASSSQDESKEEKPERKKKEESSSQG--EGKEEE 352
Query: 290 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 406
PE+ + +S+ E E E EA + IK T
Sbjct: 353 PEKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKET 391
>At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family
protein sequencing discrepancy between cDNA and genomic
sequence prevents representation of entire coding
sequence
Length = 578
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +2
Query: 299 SPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 457
+P R P +PPP + +APP +++ P ++ P SP
Sbjct: 463 TPSANRVRSPPSPRSVMPPPPPKTIAPPPSKTMSPPSSKSMLPPPPRSKTMSP 515
>At2g16595.1 68415.m01904 translocon-associated protein (TRAP),
putative similar to Swiss-Prot:P45434
translocon-associated protein, alpha subunit precursor
(TRAP-alpha, Signal sequence receptor alpha subunit,
SSR-alpha) [Arabidopsis thaliana]
Length = 140
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -1
Query: 184 DGVVALVEDGLLFRVRNLFLELLIL 110
+G + +VEDG LFR+ ++FL L++
Sbjct: 58 NGTIEVVEDGPLFRMESVFLSGLLI 82
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/80 (23%), Positives = 42/80 (52%)
Frame = +2
Query: 17 EKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKWLD 196
E+ + ++ ++ + LE+ C +K + K+Q+++ D ++ + L+K + I + +
Sbjct: 528 EREKAAEEHRQYMADYRKFLET-CDYIKAGTQWRKIQDRLEDDDRCSCLEKIDRLIGFEE 586
Query: 197 SNQLAEKEEYEHKQKELEGI 256
EKEE E K+ E E +
Sbjct: 587 YILDLEKEEEELKRVEKEHV 606
>At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein similar to human splicing
factor GB:CAA59494 GI:899298 from [Homo sapiens];
contains Pfam profile PF01805: Surp module
Length = 735
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +2
Query: 116 EKLQEKISDSEKQTILDKCNDTIKWLDSNQLAEKEEYEHKQKE 244
EKL++ ++D T+L++C + ++W + + +E + K+KE
Sbjct: 245 EKLRKSVADLT--TVLERCLNRLEWDRFQEEEKNKEEDEKEKE 285
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 113 DEKLQEKISDSEKQTILD--KCNDTIKWLDSNQLAEKEEYEHKQKELE 250
DEK++EK+ D +K K + K D + + EKE+ E +QK E
Sbjct: 166 DEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAE 213
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 311 CRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPT 430
C S P P P PP ++KP HT PT
Sbjct: 26 CDCSDPPKPSPHPVKPPKHPAKPPKPPTVKPPTHTPKPPT 65
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 110 EDEKLQEKISDSEKQTILDKCNDTIKWLDSNQLAEKEEYEHKQKELE 250
E++ +QEK D E+ + +K D + S + +++E + K+KE E
Sbjct: 641 EEDVVQEKDGDQEEDVVQEKDGDQEEDGVSKEKEQEKEKDPKEKEKE 687
>At2g32590.1 68415.m03979 barren family protein low similarity to
SP|Q9Y7R3 Condensin complex subunit 2 (p105)
{Schizosaccharomyces pombe}; contains Pfam profile
PF05786: Barren protein
Length = 704
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 29 NEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKWLDSNQL 208
N+D ++E +A A S S+ F + E +KQ IL+ + IK N++
Sbjct: 32 NDDRLEREQARAARAAASRRRSVIFARGSQPETESDPCFDKQQILELFQNCIKLASENKI 91
Query: 209 AEKEEYE 229
+K +E
Sbjct: 92 NQKNTWE 98
>At5g13370.1 68418.m01540 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 595
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 166 QVQRHHQVAGFQPAGRKGGV*AQAERIGRHYNPIIT 273
+V++ HQ AG P + V +IG Y P++T
Sbjct: 361 EVEKDHQEAGHDPTEKPVVVDLVDVKIGHDYEPVVT 396
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 299 SPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 457
SP+ +A P+ E+ PP LE + P + KP +H ++P
Sbjct: 408 SPKPTPTPKAPEPKKEINPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPSNP 460
>At2g06990.1 68415.m00800 HUA enhancer 2 (HEN2) / DExH-box RNA
helicase, putative nearly identical to HUA enhancer 2
[Arabidopsis thaliana] GI:16024936
Length = 995
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 23 YRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQE 130
+++EDD+Q ++FQ K + +K M D +LQ+
Sbjct: 763 HKSEDDQQIKSFQRKAEVNYEIQQLKSKMRDSQLQK 798
>At1g70250.1 68414.m08082 receptor serine/threonine kinase, putative
similar to to receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 799
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 311 CRASRAEHPEPEV-PPPGLEALAPPSRRSIKP 403
C S A P P++ PPP + L PP S P
Sbjct: 95 CSGSGAPPPPPDLFPPPSAQMLPPPPASSPAP 126
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +2
Query: 332 HPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 427
HP P PP + PP + + P +KP
Sbjct: 59 HPHPHPHPPAKSPVKPPVKAPVSPPAKPPVKP 90
>At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 554
Score = 27.5 bits (58), Expect = 6.1
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +2
Query: 110 EDEKLQEKISDSE---KQTILDKCNDTIKWLDSNQLAEKEEYEHKQKELEGITIR*LRRC 280
+DE L+ K S++E K+ IL+K + +D ++ +
Sbjct: 143 DDESLKVKKSETEEKAKEAILEKQDSVKSQIDDKDCSKVSVKSEMVSKSFAPPPPPPPGN 202
Query: 281 TRVPEESPEVCRASRAEHPEPEVPPPGLEALAPP 382
+P E P A + + P PPPG AL PP
Sbjct: 203 AAIPVEPPLTMSAEKESYA-PLPPPPGRAALPPP 235
>At5g66750.1 68418.m08414 SNF2 domain-containing protein / helicase
domain-containing protein similar to
proliferation-associated SNF2-like protein [Homo
sapiens] GI:8980660; contains Pfam profiles PF00271:
Helicase conserved C-terminal domain, PF00176: SNF2
family N-terminal domain
Length = 764
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 104 TMEDEKLQEKISDSEKQTILDKCNDTIKWLDSNQLAE 214
T ED+ +Q ISD++ +LD+ + TI Q AE
Sbjct: 703 TAEDKLIQTDISDADLDRLLDRSDLTITAPGETQAAE 739
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 35 DDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKWLDSN 202
++K+ E+ + AL S S+ T+EDE E+ ++ K + K +D +K DSN
Sbjct: 212 EEKKNESEKDGGAL-SLLGSVYGTVEDEDANEESANDSKTSESAKGDDGVKVTDSN 266
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 35 DDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKWLDSN 202
++K+ E+ + AL S S+ T+EDE E+ ++ K + K +D +K DSN
Sbjct: 212 EEKKNESEKDGGAL-SLLGSVYGTVEDEDANEESANDSKTSESAKGDDGVKVTDSN 266
>At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein
similar to SP|Q01205 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Rattus norvegicus}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 290 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIK 400
P E P+V AE P+ PPP PPS++S K
Sbjct: 194 PAEKPKVESTKVAEKPKAPSPPP-----PPPSKQSAK 225
>At5g16030.1 68418.m01874 expressed protein
Length = 339
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/52 (23%), Positives = 31/52 (59%)
Frame = +2
Query: 95 MKFTMEDEKLQEKISDSEKQTILDKCNDTIKWLDSNQLAEKEEYEHKQKELE 250
+K +D KL+EK + EKQ + ++ ++ + + ++E+++ E + ++ E
Sbjct: 246 VKGQQQDVKLEEKEKEEEKQDMSNEEDEEEEEEEKQDMSEEDDKEEEDEQEE 297
>At5g08480.2 68418.m01002 VQ motif-containing protein contains
PF05678: VQ motif
Length = 173
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 332 HPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 457
H + P LE + PP S KPT T + N +L+TSP
Sbjct: 65 HERRQCMRPKLEIVKPPL--SFKPTGTTPSSKSGNTNLLTSP 104
>At5g07660.1 68418.m00877 structural maintenance of chromosomes
(SMC) family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +2
Query: 92 SMKFTMEDEKLQEKISDSEKQTI---LDKCNDTIKWLDSNQLAEKEEYEHKQKELEGITI 262
S++ ++ ++K Q E + L+ ++K ++A +EEY HK ++ I
Sbjct: 293 SLRVSLTEKKAQVACLIDESTAMKRELECLRQSMKKAAREKIALEEEYHHKCSNIQKIKD 352
Query: 263 R*LRRCTRVPEESPEV-CRASRAEHPEPE 346
R +RR R E+ E+ R+++ E E E
Sbjct: 353 R-VRRLERQIEDINEMTIRSTQVEQSEIE 380
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 EAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEK-QTILDKCNDTIK 187
E+E +++ ++KE + K+ + K +D+K +EK S+ K + ++ D
Sbjct: 1001 ESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKA 1060
Query: 188 WLDSNQLAEKEEYE-HKQKELE 250
+ EK+E E HK K+ E
Sbjct: 1061 KKKEEETKEKKESENHKSKKKE 1082
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 17 EKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKWLD 196
EK +E+ K K+ K ++ SMK ED+K ++K +S+ + + D K D
Sbjct: 1069 EKKESENHKSKKKEDKKEHEDNK--SMK-KEEDKKEKKKHEESKSRKKEEDKKDMEKLED 1125
Query: 197 SNQLAEKEEYEHKQK 241
N +KE+ K+K
Sbjct: 1126 QNSNKKKEDKNEKKK 1140
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +2
Query: 11 EAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDTIKW 190
+ E RN D++ K K+ + K E L+ +D ++T + + ++ I
Sbjct: 2299 QMESARNADEEMKRILDEKHM--DLAQAKKHI---EALERNTAD--QKTEITQLSEHISE 2351
Query: 191 LDSNQLAEKEEYEHKQKELEGI 256
L+ + A+ EY HK KELE +
Sbjct: 2352 LNLHAEAQASEYMHKFKELEAM 2373
>At2g25320.1 68415.m03029 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1663
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/86 (26%), Positives = 44/86 (51%)
Frame = +2
Query: 2 MVNEAEKYRNEDDKQKETFQAKNALESYCFSMKFTMEDEKLQEKISDSEKQTILDKCNDT 181
M EA+++ E E F+ +ES ++ +DE +K+S SEK+T+LD+ ++
Sbjct: 1395 MKAEADRFSREKKDLVEQFRD---VESQLEWIRSERQDEI--DKLS-SEKKTLLDRLHEA 1448
Query: 182 IKWLDSNQLAEKEEYEHKQKELEGIT 259
L + +++E + KE +T
Sbjct: 1449 ETQLALQKTRKRDELKKVGKEKNALT 1474
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 32 EDDKQKETFQAKNALESYCFSMKFTMEDE 118
+D +ET KNA+ESY + M+ + D+
Sbjct: 612 QDRVMEETKDRKNAVESYVYDMRNKLSDK 640
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 32 EDDKQKETFQAKNALESYCFSMKFTMEDE 118
+D +ET KNA+ESY + M+ + D+
Sbjct: 612 QDRVMEETKDRKNAVESYVYDMRNKLSDK 640
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 110 EDEKLQEKISDSEKQTILDKCNDTIKWLDSNQLAEKEEYEHKQKELE 250
E + LQEK+ EK + ++ LDS Q + E E K+K ++
Sbjct: 322 ELQALQEKLEAREKMAVQQLVDEHQAKLDSTQREFELEMEQKRKSID 368
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,090,854
Number of Sequences: 28952
Number of extensions: 211501
Number of successful extensions: 1146
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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