Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0712
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   6.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   6.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   6.4  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 125 VVL*AICYYIIA*SESGFR 69
           V+L ++CY++I  +  GFR
Sbjct: 507 VILTSVCYFMIGLNSQGFR 525


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 125 VVL*AICYYIIA*SESGFR 69
           V L ++CY++I  +  GFR
Sbjct: 507 VTLTSVCYFMIGLNSHGFR 525


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/51 (25%), Positives = 19/51 (37%)
 Frame = +3

Query: 336 FNTSGLSASLLRFSIA*KLAHICMEWDRLRTFAARGAVPTAYKIRLTFTLS 488
           F  SGL++  L   +A K      +W  +    A    P     RL   L+
Sbjct: 108 FYCSGLASGYLYLKLAMKWPRFMKDWSCVEVMMASYGWPAGLNRRLNVLLA 158


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/51 (25%), Positives = 19/51 (37%)
 Frame = +3

Query: 336 FNTSGLSASLLRFSIA*KLAHICMEWDRLRTFAARGAVPTAYKIRLTFTLS 488
           F  SGL++  L   +A K      +W  +    A    P     RL   L+
Sbjct: 108 FYCSGLASGYLYLKLAMKWPRFMKDWSCVEVMMASYGWPAGLNRRLNVLLA 158


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/51 (25%), Positives = 19/51 (37%)
 Frame = +3

Query: 336 FNTSGLSASLLRFSIA*KLAHICMEWDRLRTFAARGAVPTAYKIRLTFTLS 488
           F  SGL++  L   +A K      +W  +    A    P     RL   L+
Sbjct: 108 FYCSGLASGYLYLKLAMKWPRFMKDWSCVEVMMASYGWPAGLNRRLNVLLA 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,829
Number of Sequences: 336
Number of extensions: 3728
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)