Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0712
         (790 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1417 - 26922775-26922986,26923102-26923291,26923816-269239...    28   9.7  
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    28   9.7  

>08_02_1417 -
           26922775-26922986,26923102-26923291,26923816-26923928,
           26924032-26924112,26925329-26926661
          Length = 642

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -1

Query: 439 LAANVRKRSHSIQI*ANFYAIENLKRLALSPLVLNSYCSLWKSCN 305
           +A +   R  S+ + + F+A+     LA    VLN+  +++ SCN
Sbjct: 10  IAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCN 54


>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 152 DMFTLYHCTILLYYWLSTGCYTIW 223
           + F L+  +  +YYWL  G + IW
Sbjct: 47  EAFRLFLLSTSVYYWLGKGSFVIW 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,781
Number of Sequences: 37544
Number of extensions: 332368
Number of successful extensions: 555
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)