Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0707
(758 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 144 2e-33
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 126 4e-28
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 125 1e-27
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 123 4e-27
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 122 1e-26
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 115 1e-24
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 113 3e-24
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 107 2e-22
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 101 2e-20
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 97 4e-19
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 86 8e-16
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 85 2e-15
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 82 2e-14
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 77 6e-13
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 75 2e-12
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 75 3e-12
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 74 3e-12
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 73 8e-12
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 72 2e-11
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 71 2e-11
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 3e-11
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 69 2e-10
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 68 2e-10
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 68 3e-10
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 67 4e-10
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 67 4e-10
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 67 5e-10
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 67 5e-10
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 67 5e-10
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 66 7e-10
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 66 1e-09
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 65 2e-09
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 65 2e-09
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 65 2e-09
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 64 3e-09
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 64 3e-09
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 64 4e-09
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 64 5e-09
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 64 5e-09
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 64 5e-09
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 64 5e-09
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 63 6e-09
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 63 6e-09
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 63 8e-09
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 63 8e-09
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 63 8e-09
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 62 1e-08
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 62 1e-08
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 62 1e-08
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 62 1e-08
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 62 1e-08
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 2e-08
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 62 2e-08
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 60 4e-08
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 60 4e-08
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 60 4e-08
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 60 4e-08
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 60 4e-08
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 60 4e-08
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 60 6e-08
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 60 6e-08
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 60 8e-08
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 59 1e-07
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 59 1e-07
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 59 1e-07
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 59 1e-07
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 58 2e-07
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 58 2e-07
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 58 2e-07
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 58 2e-07
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 58 2e-07
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 58 2e-07
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 58 2e-07
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 58 2e-07
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 58 3e-07
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 58 3e-07
UniRef50_A2E7Z7 Cluster: Helicase conserved C-terminal domain co... 58 3e-07
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 57 4e-07
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 57 4e-07
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 57 4e-07
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 57 4e-07
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 57 4e-07
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 57 4e-07
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 57 5e-07
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 57 5e-07
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 56 7e-07
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 56 7e-07
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 56 7e-07
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 56 9e-07
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 56 9e-07
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 56 9e-07
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 56 9e-07
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 56 1e-06
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 56 1e-06
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 55 2e-06
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 55 2e-06
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 55 2e-06
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 55 2e-06
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 55 2e-06
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 55 2e-06
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 55 2e-06
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 55 2e-06
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 54 3e-06
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 54 3e-06
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 54 3e-06
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 54 3e-06
UniRef50_Q7QV50 Cluster: GLP_435_34658_36088; n=1; Giardia lambl... 54 3e-06
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 54 4e-06
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 54 4e-06
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 54 4e-06
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 54 4e-06
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 54 4e-06
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 54 4e-06
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 54 4e-06
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 54 5e-06
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 54 5e-06
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 54 5e-06
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 54 5e-06
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 54 5e-06
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 54 5e-06
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 54 5e-06
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 53 7e-06
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 53 7e-06
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 53 7e-06
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 53 7e-06
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 53 7e-06
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 53 7e-06
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 9e-06
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 53 9e-06
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 53 9e-06
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 53 9e-06
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 52 1e-05
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 52 1e-05
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 52 1e-05
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 52 1e-05
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 52 1e-05
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 52 1e-05
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 52 1e-05
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 52 1e-05
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 2e-05
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 52 2e-05
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 52 2e-05
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 2e-05
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 52 2e-05
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 52 2e-05
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 52 2e-05
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 52 2e-05
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 52 2e-05
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 52 2e-05
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 52 2e-05
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 52 2e-05
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 52 2e-05
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 51 3e-05
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 51 3e-05
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 51 3e-05
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 51 3e-05
UniRef50_A2E773 Cluster: Helicase conserved C-terminal domain co... 51 3e-05
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 51 3e-05
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 51 3e-05
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 51 3e-05
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 51 3e-05
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 51 4e-05
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 51 4e-05
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 51 4e-05
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 51 4e-05
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 51 4e-05
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 51 4e-05
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 51 4e-05
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 51 4e-05
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 50 5e-05
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 50 5e-05
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 50 5e-05
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 50 5e-05
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 50 5e-05
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 50 5e-05
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 50 5e-05
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 50 6e-05
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 50 6e-05
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 50 6e-05
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 6e-05
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 50 6e-05
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 50 6e-05
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 50 6e-05
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 50 6e-05
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 50 6e-05
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 50 6e-05
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 50 6e-05
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 50 8e-05
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 50 8e-05
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 50 8e-05
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 50 8e-05
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 50 8e-05
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 50 8e-05
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 50 8e-05
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 50 8e-05
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 50 8e-05
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 50 8e-05
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 49 1e-04
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 49 1e-04
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 49 1e-04
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 49 1e-04
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 49 1e-04
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 49 1e-04
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 49 1e-04
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 49 1e-04
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 49 1e-04
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 49 1e-04
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 49 1e-04
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 49 1e-04
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 49 1e-04
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 49 1e-04
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 49 1e-04
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 49 1e-04
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyc... 49 1e-04
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 49 1e-04
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 49 1e-04
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 48 2e-04
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 48 2e-04
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 48 2e-04
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 48 2e-04
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 48 2e-04
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 48 2e-04
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 48 2e-04
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 48 3e-04
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 48 3e-04
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 48 3e-04
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 48 3e-04
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 48 3e-04
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 48 3e-04
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 48 3e-04
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 48 3e-04
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 48 3e-04
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 48 3e-04
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 48 3e-04
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 48 3e-04
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 48 3e-04
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 48 3e-04
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 48 3e-04
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 48 3e-04
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 48 3e-04
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 48 3e-04
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 48 3e-04
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 48 3e-04
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 48 3e-04
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 48 3e-04
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 48 3e-04
UniRef50_A3H8H5 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 48 3e-04
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 48 3e-04
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 48 3e-04
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 47 4e-04
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 47 4e-04
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 47 4e-04
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 47 4e-04
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 47 4e-04
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 47 4e-04
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 47 4e-04
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 47 4e-04
UniRef50_A7APA3 Cluster: DEAD/DEAH box helicase domain containin... 47 4e-04
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 47 4e-04
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 47 4e-04
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 47 4e-04
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 47 6e-04
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 47 6e-04
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 47 6e-04
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 47 6e-04
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 47 6e-04
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 47 6e-04
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 47 6e-04
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 47 6e-04
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 47 6e-04
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 47 6e-04
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 47 6e-04
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 47 6e-04
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 47 6e-04
UniRef50_Q6DDL4 Cluster: LOC398446 protein; n=4; Tetrapoda|Rep: ... 46 8e-04
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 8e-04
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 46 8e-04
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 46 8e-04
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 46 8e-04
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 46 8e-04
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 46 8e-04
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 46 8e-04
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 46 0.001
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 46 0.001
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 46 0.001
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 46 0.001
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 46 0.001
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 46 0.001
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 46 0.001
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 46 0.001
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 46 0.001
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 46 0.001
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 46 0.001
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 46 0.001
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 0.001
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 0.001
UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium f... 46 0.001
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 46 0.001
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 46 0.001
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 46 0.001
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 46 0.001
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 46 0.001
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 45 0.002
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 45 0.002
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 45 0.002
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 45 0.002
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 45 0.002
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 45 0.002
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 45 0.002
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 45 0.002
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 45 0.002
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 45 0.002
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 45 0.002
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 45 0.002
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 45 0.002
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 45 0.002
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 45 0.002
UniRef50_A5KCF7 Cluster: ATP-dependent RNA helicase, putative; n... 45 0.002
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 45 0.002
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 45 0.002
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 45 0.002
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 45 0.002
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 45 0.002
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 45 0.002
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 44 0.003
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 44 0.003
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 44 0.003
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.003
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 44 0.003
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.003
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 44 0.003
UniRef50_Q5BVP1 Cluster: SJCHGC07759 protein; n=1; Schistosoma j... 44 0.003
UniRef50_Q4UIB5 Cluster: DEAD-box family (RNA) helicase, putativ... 44 0.003
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 44 0.003
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 44 0.003
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.003
UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, wh... 44 0.003
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 44 0.003
UniRef50_Q8GUG7 Cluster: DEAD-box ATP-dependent RNA helicase 50;... 44 0.003
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 44 0.003
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 44 0.004
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 44 0.004
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 44 0.004
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 44 0.004
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 44 0.004
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 44 0.004
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 44 0.004
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 44 0.004
UniRef50_A0DXN3 Cluster: Chromosome undetermined scaffold_69, wh... 44 0.004
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 44 0.004
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 44 0.004
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 44 0.004
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 44 0.004
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 44 0.005
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.005
UniRef50_Q6YQC2 Cluster: Superfamily II DNA and RNA helicase; n=... 44 0.005
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 44 0.005
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.005
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 44 0.005
UniRef50_Q5C2I6 Cluster: SJCHGC04550 protein; n=1; Schistosoma j... 44 0.005
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 44 0.005
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 44 0.005
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 44 0.005
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 44 0.005
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 44 0.005
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 43 0.007
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.007
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.007
UniRef50_Q7R850 Cluster: ATP-dependent RNA helicase; n=1; Plasmo... 43 0.007
UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 43 0.007
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 43 0.007
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 43 0.007
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 43 0.007
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 43 0.007
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 43 0.009
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 43 0.009
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 43 0.009
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 43 0.009
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.009
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.009
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 43 0.009
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 43 0.009
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 43 0.009
UniRef50_Q5BYX8 Cluster: SJCHGC04912 protein; n=1; Schistosoma j... 43 0.009
UniRef50_Q4XXT1 Cluster: ATP-dependent RNA helicase, putative; n... 43 0.009
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 43 0.009
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.009
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 43 0.009
UniRef50_Q5UQD1 Cluster: Putative ATP-dependent RNA helicase R45... 43 0.009
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 43 0.009
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 42 0.013
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 42 0.013
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 42 0.013
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 42 0.013
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 42 0.013
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 42 0.013
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 42 0.013
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 42 0.013
UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.013
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 42 0.013
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 42 0.013
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 42 0.013
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 42 0.017
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.017
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 42 0.017
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.017
UniRef50_P52271 Cluster: Probable ATP-dependent RNA helicase MG3... 42 0.017
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 42 0.017
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 42 0.022
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 42 0.022
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 42 0.022
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 42 0.022
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 42 0.022
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 42 0.022
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 42 0.022
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 42 0.022
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.022
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 42 0.022
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 42 0.022
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 42 0.022
UniRef50_UPI00006CA6E2 Cluster: Type III restriction enzyme, res... 41 0.029
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 41 0.029
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 41 0.029
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 41 0.029
UniRef50_Q55CN3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.029
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 41 0.029
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 41 0.029
UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;... 41 0.029
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 41 0.029
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 41 0.029
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 41 0.029
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 41 0.038
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 41 0.038
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 41 0.038
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 41 0.038
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 41 0.038
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 41 0.038
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 41 0.038
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 41 0.038
UniRef50_Q015D2 Cluster: DEAD/DEAH box helicase family protein /... 41 0.038
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 41 0.038
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 41 0.038
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 41 0.038
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 41 0.038
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 41 0.038
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 41 0.038
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 40 0.050
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 40 0.050
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 40 0.050
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 40 0.050
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 40 0.050
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 40 0.050
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.050
UniRef50_A5K9E1 Cluster: DEAD-box subfamily ATP-dependant helica... 40 0.050
UniRef50_A5K8S1 Cluster: DEAD/DEAH box helicase, putative; n=1; ... 40 0.050
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 40 0.050
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 40 0.050
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 40 0.050
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 40 0.050
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 40 0.050
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 40 0.067
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 40 0.067
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 40 0.067
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 40 0.067
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 40 0.067
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 40 0.067
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 40 0.067
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 40 0.067
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 40 0.067
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 40 0.067
UniRef50_Q0UG00 Cluster: ATP-dependent RNA helicase MSS116, mito... 40 0.067
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 144 bits (350), Expect = 2e-33
Identities = 79/164 (48%), Positives = 101/164 (61%)
Frame = +2
Query: 257 RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQS 436
+KDP+SPLYSVKTFE L LK LLKG+YAMGFN PSKIQE ALP +LA PPQN+IAQSQS
Sbjct: 86 QKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQS 145
Query: 437 GTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEG 616
GTGKTAAFVLAMLSRV++ + +PQ L P + +++++ F + + G
Sbjct: 146 GTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRG 205
Query: 617 KNFPGVQKSQITFLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
P ++ L L + K++ FVLDEA
Sbjct: 206 NRIPRGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEA 249
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 126 bits (305), Expect = 4e-28
Identities = 61/108 (56%), Positives = 78/108 (72%)
Frame = +2
Query: 257 RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQS 436
++DP+SPLYSVK+FE L LKP LLKGVY MGFN PS+IQE ALP ++A P QN+IAQSQS
Sbjct: 27 QRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQS 86
Query: 437 GTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNF 580
GTGKTAAF LAML V+ +PQ + P ++ ++L++ F
Sbjct: 87 GTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRF 134
Score = 81.8 bits (193), Expect = 2e-14
Identities = 33/70 (47%), Positives = 50/70 (71%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFG 702
PTYELA+Q G+V +M +FC +++L YAVRG + RG+K+ + I++GTPG ++DW K
Sbjct: 116 PTYELALQIGQVLEQMGRFCADVRLVYAVRGNRIVRGTKVQEQIVVGTPGTVYDWCAKQK 175
Query: 703 MFDMGKIKVF 732
+ D KI +F
Sbjct: 176 VLDPKKITMF 185
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 125 bits (302), Expect = 1e-27
Identities = 67/167 (40%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Frame = +2
Query: 254 KRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 433
+R+DP SPLYS+ +F L LKP +LK + M F P++IQETALP LL +PP N+IAQ+Q
Sbjct: 606 QRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQ 665
Query: 434 SGTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLE 613
SGTGKTAAFVL ML R+D N PQ L P + ++ ++++K F+ ++
Sbjct: 666 SGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIK 725
Query: 614 GKNFPGVQKSQITFLLVLQERCLIG--VSSLACLIWVKLKFFVLDEA 748
G N ++ ++T +V+ + + C+ K++ VLDEA
Sbjct: 726 GGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEA 772
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 123 bits (297), Expect = 4e-27
Identities = 61/91 (67%), Positives = 70/91 (76%)
Frame = +2
Query: 254 KRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 433
++ DPNSPLYSVKTFE L LKP LLKGVYAMG+N PSKIQE ALP ++ P N+IAQSQ
Sbjct: 58 QQSDPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALP-IIIQSPNNLIAQSQ 116
Query: 434 SGTGKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
SGTGKTAAF L ML+ VD + N PQ + P
Sbjct: 117 SGTGKTAAFTLGMLNCVDPSINAPQAICISP 147
Score = 41.5 bits (93), Expect = 0.022
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVK 696
PT ELA+QT EV +K+ +F IK + E+P+ +T+ ++IGTPGK+ + +K
Sbjct: 147 PTKELALQTFEVISKIGQF-SNIKPLLYISEIEVPK--NVTNQVIIGTPGKILENVIK 201
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 122 bits (294), Expect = 1e-26
Identities = 73/162 (45%), Positives = 95/162 (58%)
Frame = +2
Query: 263 DPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGT 442
DPNSPLYS K+F+ L L P LLKG+YAM F PSKIQE ALP LL +PP+NMIAQSQSGT
Sbjct: 83 DPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGT 142
Query: 443 GKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEGKN 622
GKTAAF L ML+RV+ PQ L P + ++++Q+ F + QL +
Sbjct: 143 GKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFT---KITSQLIVPD 199
Query: 623 FPGVQKSQITFLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
K ++V ++ + + K+K FVLDEA
Sbjct: 200 SFEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEA 241
Score = 36.7 bits (81), Expect = 0.62
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFG 702
P+ ELA QT EV +M KF +I + V + + +I +++GTPG + D ++
Sbjct: 170 PSRELARQTLEVVQEMGKFT-KITSQLIVP-DSFEKNKQINAQVIVGTPGTVLDL-MRRK 226
Query: 703 MFDMGKIKVF 732
+ + KIK+F
Sbjct: 227 LMQLQKIKIF 236
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 115 bits (276), Expect = 1e-24
Identities = 55/88 (62%), Positives = 67/88 (76%)
Frame = +2
Query: 263 DPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGT 442
DPNSPLYSV++F+ L+L +L+KG+ A GF PSKIQE ALP LL++PP+N+I QSQSGT
Sbjct: 139 DPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGT 198
Query: 443 GKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
GKTAAF L MLSRVD PQ + P
Sbjct: 199 GKTAAFTLNMLSRVDPTIPTPQAICIAP 226
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 113 bits (273), Expect = 3e-24
Identities = 55/90 (61%), Positives = 70/90 (77%)
Frame = +2
Query: 257 RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQS 436
R DP+ PL+SV+TF+ L+LK LLKG+ AMGF PS IQE AL +L++D PQNMIAQSQS
Sbjct: 65 RSDPDHPLHSVRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISDNPQNMIAQSQS 124
Query: 437 GTGKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
GTGKTA F+LAMLSR+ ++ +Y Q + P
Sbjct: 125 GTGKTATFLLAMLSRIRTDVHYCQCLCMAP 154
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 107 bits (258), Expect = 2e-22
Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Frame = +2
Query: 209 NHTARSS*I*TRYRNKR-KDPNS-PLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETA 382
NH+ R + + T N K N+ PLYSVK+FE L LK LL G+ +MGF PS IQE A
Sbjct: 19 NHSLRKTLVETDPINVTIKQSNADPLYSVKSFEDLQLKSELLNGISSMGFRKPSSIQERA 78
Query: 383 LPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLL 562
LP LL + P+N+IAQSQSGTGKTA F+L MLS++D N + Q + P ++ ++
Sbjct: 79 LPMLLENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVA 138
Query: 563 QKWQNFVLK*S*SMQLEGKNFPGVQKSQITFLLVL--QERCLIGVSSLACLIW--VKLKF 730
F+ + ++G + P + + QI +++ + + L + KLK
Sbjct: 139 IIMSKFMNNVKITCAIKGLS-PDILEGQINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKV 197
Query: 731 FVLDEA 748
FVLDEA
Sbjct: 198 FVLDEA 203
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 101 bits (242), Expect = 2e-20
Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +2
Query: 263 DPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGT 442
D +SPL S+ +F L L ++ G+ AM F PSKIQ ALP +L++PP+NMIAQSQSGT
Sbjct: 87 DTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGT 146
Query: 443 GKTAAFVLAMLSRVDSNK-NYPQYCVLVPHMN*PYKLVKLLQKWQNF 580
GKT AFV+ +LSRVD N+ N PQ L P ++ ++Q F
Sbjct: 147 GKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQF 193
Score = 37.9 bits (84), Expect = 0.27
Identities = 20/72 (27%), Positives = 40/72 (55%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFG 702
P+ ELA Q V + +FC + + A+ G + R + + ++++GTPG + D ++
Sbjct: 175 PSRELARQIQSVIQSIGQFCTGLVVDAAIPG-AISRETGVKANVVVGTPGTVMDL-IRRR 232
Query: 703 MFDMGKIKVFCV 738
FD+ ++K+ V
Sbjct: 233 QFDVSQLKLLVV 244
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/88 (53%), Positives = 61/88 (69%)
Frame = +2
Query: 263 DPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGT 442
DP + LYS K + L+L P+LLKG+Y GFN PSKIQ ALP L+ + P N+IAQ+ +G+
Sbjct: 103 DPKAQLYSAKDWSDLNLSPDLLKGIYNKGFNRPSKIQAAALP-LILNSPMNLIAQAHNGS 161
Query: 443 GKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
GKTA F LAML +VD+ +PQ L P
Sbjct: 162 GKTATFALAMLGKVDTRIIHPQCMCLCP 189
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 86.2 bits (204), Expect = 8e-16
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +2
Query: 263 DPNSPLYSVKTFEALHLKPNLLKGVYA-MGFNAPSKIQETALPTLLADPPQNMIAQSQSG 439
DP++P S KTFE L L LL+G+Y M F PSKIQ LP +L P +N+IAQ+ +G
Sbjct: 78 DPSTPYSSAKTFEDLGLSAELLRGLYGEMKFEKPSKIQAETLPLILMPPHRNLIAQAHNG 137
Query: 440 TGKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
+GKT F L MLSR+D PQ ++ P
Sbjct: 138 SGKTTCFTLGMLSRIDPAVKTPQGLMICP 166
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDW 687
PT EL +Q V +M K+ A + +KI D +IGTPGK+ W
Sbjct: 166 PTRELVVQNVSVMERMGKYTGITIASTADPKWDNTNRNKIVDQAVIGTPGKILRW 220
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +2
Query: 269 NSPLYSVKTFEALHLKPNLLKGVYA-MGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 445
++P S FE L+L P L+KG+Y M F PSKIQ +LP ++ P +++IAQ+ +G+G
Sbjct: 84 DTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSG 143
Query: 446 KTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNF 580
KT FVL MLSRVD PQ + P + +++LQK F
Sbjct: 144 KTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKF 188
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFC---PEIKLKYAVRGEELP-RGSKITDHILIGTPGKMFDWG 690
PT ELA Q EV KM KF E+ + + RG RG+ ++ H++IGTPG + W
Sbjct: 170 PTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKW- 228
Query: 691 VKFGMFDMGKIKV 729
+ F + +K+
Sbjct: 229 MAFKRLGLNHLKI 241
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVY-AMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF 460
S FE L L P LLKG++ MGF+ PSKIQ LP +L P +++IAQ+ +G+GKT F
Sbjct: 98 SAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCF 157
Query: 461 VLAMLSRVDSNKNYPQYCVLVP 526
VL MLSRVD N+ Q + P
Sbjct: 158 VLGMLSRVDPNRKVTQAICICP 179
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 76.6 bits (180), Expect = 6e-13
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +2
Query: 281 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF 460
YSV +FE + L NLL+G++A GF PS IQ+ A+ + ++IAQSQSGTGKTA +
Sbjct: 18 YSVDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKG--FDVIAQSQSGTGKTATY 75
Query: 461 VLAMLSRVDSNKNYPQYCVLVP 526
V+A L R+D K Q +L P
Sbjct: 76 VIAALQRIDMMKEDTQAIILAP 97
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/92 (45%), Positives = 58/92 (63%)
Frame = +2
Query: 305 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 484
L L P+LLKG+ MGF PSKIQ+ ALP +L N+IAQ+++G+GKTA F LAMLS+V
Sbjct: 104 LPLSPDLLKGIQNMGFAKPSKIQQCALPLILGSCT-NIIAQAKNGSGKTATFALAMLSKV 162
Query: 485 DSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNF 580
+ N Q + P + V+++QK F
Sbjct: 163 NVNVPLVQALCICPTRELATQNVQVIQKLGQF 194
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/77 (48%), Positives = 50/77 (64%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F AL + P +L + A+G+ PS IQ A+P +LA +MI Q+Q+GTGKTAAF L ML
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAG--HDMIGQAQTGTGKTAAFALPML 82
Query: 476 SRVDSNKNYPQYCVLVP 526
SR+D + PQ +L P
Sbjct: 83 SRIDPARREPQLLILAP 99
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/80 (45%), Positives = 53/80 (66%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V F+ + L P LL+GVY+ GF APS+IQ A+ + +++IAQ+QSGTGKT AF +
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSI 149
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+LS++D ++ Q VL P
Sbjct: 150 GVLSKIDVSQKTTQALVLAP 169
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 72.9 bits (171), Expect = 8e-12
Identities = 36/80 (45%), Positives = 54/80 (67%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V F+ ++LK +LL+GVYA GF PS IQ+ A+ + ++IAQ+QSGTGKTA FV+
Sbjct: 29 VDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKG--HDVIAQAQSGTGKTATFVI 86
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
++L R+D++ Q +L P
Sbjct: 87 SILQRIDTSLKETQALILAP 106
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/85 (44%), Positives = 53/85 (62%)
Frame = +2
Query: 272 SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 451
S S +F L L P +L+ V A+G+ PS IQ ++P LLA +++ +Q+GTGKT
Sbjct: 18 STFMSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAG--NHLLGVAQTGTGKT 75
Query: 452 AAFVLAMLSRVDSNKNYPQYCVLVP 526
AAF L +LSR+D+N PQ VL P
Sbjct: 76 AAFALPLLSRIDANVAEPQILVLAP 100
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +2
Query: 272 SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 451
SP S TF L + P +L+ + +G+ +P+ IQ +P L+A +++ +Q+GTGKT
Sbjct: 7 SPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAG--SDVVGLAQTGTGKT 64
Query: 452 AAFVLAMLSRVDSNKNYPQYCVLVP 526
AAF + MLS++D PQ VLVP
Sbjct: 65 AAFAIPMLSKIDITSKVPQALVLVP 89
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/80 (41%), Positives = 52/80 (65%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V+TFE L L +LL+G+++ GF PS IQ+ A+ ++ ++++AQ+QSGTGKT F +
Sbjct: 55 VETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILG--KDVLAQAQSGTGKTGTFTI 112
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
L R+D N+ Q +L P
Sbjct: 113 GALQRIDPNQRKTQVIILAP 132
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/78 (44%), Positives = 51/78 (65%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF+ L L LL+ + MGF PSKIQE A+P LLA+ ++M+A +Q+GTGKTAAF +
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAE-DRDMVALAQTGTGKTAAFGFPL 60
Query: 473 LSRVDSNKNYPQYCVLVP 526
L +D++ Q ++ P
Sbjct: 61 LQNIDASSKTTQGLIIAP 78
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 69.3 bits (162), Expect = 1e-10
Identities = 36/87 (41%), Positives = 55/87 (63%)
Frame = +2
Query: 266 PNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 445
P +P+ +F +LK +L+ + +GF+ P+ IQE A+P LLA ++I Q+Q+GTG
Sbjct: 47 PVAPVAPAVSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAG--SDLIGQAQTGTG 104
Query: 446 KTAAFVLAMLSRVDSNKNYPQYCVLVP 526
KTAAF L +L+ +D +K Q VL P
Sbjct: 105 KTAAFGLPLLNNIDFSKKCVQALVLAP 131
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
SV++F+ L L+ LLK + +GF PS IQ A+P LL +++I Q+Q+GTGKTAAF
Sbjct: 3 SVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEG--RDVIGQAQTGTGKTAAFG 60
Query: 464 LAMLSRVDSNKNYPQYCVLVP 526
L +L R+D+ Q VL P
Sbjct: 61 LPLLQRIDAADRSVQALVLCP 81
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+KTFE L + P + K + MG+ P +QE +P LL + +++A +Q+GTGKTAAF L
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGEN-NDVVALAQTGTGKTAAFGL 59
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+L ++D PQ +L P
Sbjct: 60 PLLQQIDVKNRVPQSLILCP 79
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
VKTFE L L NLL G+ F P+KIQ A+P LA ++I QS+SGTGKT +V+
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALA--KMDLIIQSKSGTGKTLIYVI 81
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
A++ + N N P ++VP
Sbjct: 82 AVVQSFNPNINQPHAMIVVP 101
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF+ + L+ +LL+G+YA GF PS IQ+ A+ ++ +++IAQSQSGTGKTA F +++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96
Query: 473 LSRVDSNKNYPQYCVLVP 526
L +D Q +L P
Sbjct: 97 LQCLDIQVRETQALILAP 114
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/78 (42%), Positives = 50/78 (64%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TFE +LK LL G++ GF PS IQE A+P + ++++A++++GTGKTAAFV+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPT 104
Query: 473 LSRVDSNKNYPQYCVLVP 526
L +V N Q ++VP
Sbjct: 105 LEKVKPKLNKIQALIMVP 122
Score = 35.5 bits (78), Expect = 1.4
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG---SKITDHILIGTPGKMFD 684
PT ELA+QT +V + K C I G L T HIL+GTPG++ D
Sbjct: 122 PTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLD 177
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 66.9 bits (156), Expect = 5e-10
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L L P LLK + ++G+ P+ IQ A+ LL +++ +Q+GTGKTAAF L +
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDG--NDVLGLAQTGTGKTAAFSLPL 63
Query: 473 LSRVDSNKNYPQYCVLVP 526
LSR+D+ KN PQ VL P
Sbjct: 64 LSRIDTTKNKPQALVLCP 81
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 66.9 bits (156), Expect = 5e-10
Identities = 35/99 (35%), Positives = 57/99 (57%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ TF L ++ + +K + +G P+ IQE A+P LL P + I +Q+GTGKTAAF L
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPT-DFIGLAQTGTGKTAAFGL 59
Query: 467 AMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFV 583
+L +D+N ++ Q +L P ++ K L K+ +V
Sbjct: 60 PVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYV 98
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPE-IKLKYAVRGEELPR---GSKITDHILIGTPGKMFDWG 690
PT EL Q + K K+ + I L+ GE++ R K T HI+I TPG++ D
Sbjct: 79 PTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLKRTTHIVIATPGRLIDL- 137
Query: 691 VKFGMFDMGKIK 726
++ G D+ +K
Sbjct: 138 IERGAVDISHVK 149
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/77 (40%), Positives = 53/77 (68%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE L+ LL G+Y GF PS IQE A+P L ++++A++++GTGKTA+F++ L
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTG--RDILARAKNGTGKTASFIIPTL 95
Query: 476 SRVDSNKNYPQYCVLVP 526
+R++++ ++ Q +LVP
Sbjct: 96 NRINTSLSHIQALILVP 112
Score = 41.1 bits (92), Expect = 0.029
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMFDWGV 693
PT ELA+QT +V + P +++ G L HIL+GTPG++ D G
Sbjct: 112 PTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGS 171
Query: 694 KFGMFDMGKIKVF 732
K G+ + K VF
Sbjct: 172 K-GIASLNKCGVF 183
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE LK LL G++ MG+ PS IQE ++P L+ ++++A++++GTGK+ A+++ ML
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPML 148
Query: 476 SRVDSNKNYPQYCVLVP 526
R+D K++ Q VLVP
Sbjct: 149 ERIDLKKDHIQALVLVP 165
Score = 36.7 bits (81), Expect = 0.62
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMFDWGV 693
PT ELA+Q +++ ++AK +K+ G L D H++I TPG++ D +
Sbjct: 165 PTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDL-M 223
Query: 694 KFGMFDMGKIKV 729
K G+ + K+++
Sbjct: 224 KKGVAKVDKVQI 235
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/77 (41%), Positives = 52/77 (67%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ ++LK +LL+G+YA GF PS IQ+ A+ + ++IAQ+QSGTGKTA F +++L
Sbjct: 37 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAISIL 94
Query: 476 SRVDSNKNYPQYCVLVP 526
+++ ++ Q VL P
Sbjct: 95 QQLEIDQKETQALVLAP 111
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L L +L + +G+ PS IQ +P LL ++++ Q+Q+GTGKTAAF L +
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEG--RDVLGQAQTGTGKTAAFALPL 67
Query: 473 LSRVDSNKNYPQYCVLVP 526
LSR+D + PQ VL P
Sbjct: 68 LSRLDLQRREPQVLVLAP 85
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/100 (33%), Positives = 58/100 (58%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S F L L LL+ + +G+ +PS IQ +P LL + ++++ Q+Q+GTGKTA+F
Sbjct: 5 SFPLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNN--RDVLGQAQTGTGKTASFA 62
Query: 464 LAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFV 583
L +L+R+D + PQ VL P ++ + Q++ ++
Sbjct: 63 LPILARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYI 102
Score = 35.5 bits (78), Expect = 1.4
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-----HILIGTPGKMFDW 687
PT ELAIQ E + A + P + G+ G++++ H+++GTPG++ D
Sbjct: 83 PTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSY--GAQLSALRRGVHVVVGTPGRVID- 139
Query: 688 GVKFGMFDMGKIK 726
++ G D+ +IK
Sbjct: 140 HLEKGSLDLSRIK 152
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ + L N+L + G+ AP+ IQE +P LL+ N+I Q+Q+GTGKTAAF + ++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGK-NNVIGQAQTGTGKTAAFGIPLI 62
Query: 476 SRVDSNKNYPQYCVLVP 526
R+D N Q VL P
Sbjct: 63 ERLDEKANDVQALVLTP 79
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S FE L L +L + ++G+ PS IQE + LL + +++I Q+Q+GTGKTAAFV
Sbjct: 10 SPSKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNN--KDIIGQAQTGTGKTAAFV 67
Query: 464 LAMLSRVDSNKNYPQYCVLVP 526
L +L +++ N N PQ +L P
Sbjct: 68 LPLLDKINLNINAPQLLILAP 88
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V F+ ++LK +LL+G+YA GF PS IQ+ A+ + ++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
++L +++ Q VL P
Sbjct: 90 SILQQLEIEFKETQALVLAP 109
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/77 (41%), Positives = 50/77 (64%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +++K +LK + +GF P+KIQE LP A +++I Q+Q+GTGKTAAF + +L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLP--FAFEGKDIIGQAQTGTGKTAAFAIPIL 60
Query: 476 SRVDSNKNYPQYCVLVP 526
S +D + N Q+ V+ P
Sbjct: 61 SNLDCSINRIQHLVIAP 77
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/78 (39%), Positives = 50/78 (64%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L L +LK V +GF PS IQ++ +P LL +++ +Q+G+GKTAAF L +
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNG--NDVLGMAQTGSGKTAAFALPL 63
Query: 473 LSRVDSNKNYPQYCVLVP 526
L+++D ++ +PQ V+ P
Sbjct: 64 LAQIDPSEKHPQMLVMAP 81
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F AL L+P + + + A GF PS IQE A+P LL+ ++I Q+Q+GTGKTAAF L ++
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQD-HDIIGQAQTGTGKTAAFGLPIV 62
Query: 476 SRVDSNKNYPQYCVLVP 526
+++ PQ +L P
Sbjct: 63 QKIEPGLKKPQALILCP 79
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 272 SPLYS-VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 448
+P+ S +++F L L+ LL + +G+ PS IQ +P LLA +++ ++Q+GTGK
Sbjct: 37 NPMTSPIESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAG--HDLLGEAQTGTGK 94
Query: 449 TAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKW 571
TAAF L +L R+D PQ VL P ++ + Q++
Sbjct: 95 TAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRY 135
Score = 33.1 bits (72), Expect = 7.7
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKITDHILIGTPGKMFD 684
PT ELAIQ E + AK P + G+ + R H+++GTPG++ D
Sbjct: 120 PTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGAHVIVGTPGRVMD 176
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +2
Query: 275 PLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 454
P V F L L+P LL+ + A+G+ P+ IQ A+P L+A ++++ Q+ +GTGKTA
Sbjct: 52 PAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAG--RDLLGQAATGTGKTA 109
Query: 455 AFVLAMLSRVDSNK---NYPQYCVLVP 526
AF L +L R+ ++ + PQ VLVP
Sbjct: 110 AFALPLLHRLTDDRTGDHGPQALVLVP 136
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE L L +LL+ + +GF P+++QE A+P LL + +++A +Q+GTGKTAAF ++
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLL-EKDIDLVALAQTGTGKTAAFGFPVI 62
Query: 476 SRVDSNKNYPQYCVLVP 526
++D+N Q +L P
Sbjct: 63 QKIDANNRNTQALILSP 79
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 63.7 bits (148), Expect = 5e-09
Identities = 36/92 (39%), Positives = 57/92 (61%)
Frame = +2
Query: 245 YRNKRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIA 424
+ + R D +S + T+E LK +LLKG+Y++GF PS IQ+ A+ ++ +++ A
Sbjct: 24 FEDLRSD-SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPII--DGRDIRA 80
Query: 425 QSQSGTGKTAAFVLAMLSRVDSNKNYPQYCVL 520
Q+QSGTGKT AF +A L D +++ Q VL
Sbjct: 81 QAQSGTGKTGAFAVAALQICDMSQDVTQILVL 112
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 63.3 bits (147), Expect = 6e-09
Identities = 30/65 (46%), Positives = 47/65 (72%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF+ + L+ +LL+G+YA GF PS IQ+ A+ ++ +++IAQSQSGTGKTA F +++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSVSV 96
Query: 473 LSRVD 487
L +D
Sbjct: 97 LQCLD 101
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 63.3 bits (147), Expect = 6e-09
Identities = 35/98 (35%), Positives = 56/98 (57%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ L++ P + K V MGF S IQ A+P +LA +++ Q+Q+GTGKTAAF + +L
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAH--KDVTGQAQTGTGKTAAFGIPLL 63
Query: 476 SRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK 589
+DS N Q +L P ++ + L+K ++ K
Sbjct: 64 ENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPK 101
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMFDWGV 693
PT ELAIQ E K++ + P+I + G+ + R K I+IGTPG++ D +
Sbjct: 80 PTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQIIIGTPGRVMD-HI 138
Query: 694 KFGMFDMGKIK 726
G + IK
Sbjct: 139 DRGTLSLNNIK 149
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 62.9 bits (146), Expect = 8e-09
Identities = 32/77 (41%), Positives = 50/77 (64%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +L L NLL V ++GF + + IQ +P LLA ++++ ++Q+GTGKTAAF L L
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAG--KDVLGEAQTGTGKTAAFGLPAL 74
Query: 476 SRVDSNKNYPQYCVLVP 526
+++D++ PQ VL P
Sbjct: 75 AKIDTSIKKPQLMVLAP 91
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 62.9 bits (146), Expect = 8e-09
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+K FE L L LL G+ MGF P++IQ+ ++P LL + I +Q+GTGKTAAF L
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDG-DFIGLAQTGTGKTAAFGL 70
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+L +D N Q +L P
Sbjct: 71 PLLDLIDVNSREVQALILAP 90
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 62.9 bits (146), Expect = 8e-09
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L L LL+ + ++PS+IQ+ A+P +L + +N++ +Q+GTGKTAAF L +
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVIL-NSTKNVVGVAQTGTGKTAAFGLPV 60
Query: 473 LSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEGKNFPGVQKSQIT 652
L +++ + Q VLVP ++ K L + ++++ GK K T
Sbjct: 61 LQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLET 120
Query: 653 --FLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
+LV L+ + + + LK+ +LDEA
Sbjct: 121 PKHILVATPGRLLDLIARKAVNLSNLKYLILDEA 154
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/77 (38%), Positives = 48/77 (62%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L LLK + + F +P+K+Q+ +P +L +++I +SQ+G+GKTAAF + +
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEH--KDIIVKSQTGSGKTAAFAIPIC 63
Query: 476 SRVDSNKNYPQYCVLVP 526
VD ++N PQ VLVP
Sbjct: 64 QLVDWDENKPQALVLVP 80
Score = 34.3 bits (75), Expect = 3.3
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE----ELPRGSKITDHILIGTPGKMFDWG 690
PT ELAIQ E + +F +K+ AV G+ + K H+++GTPG++ D
Sbjct: 80 PTRELAIQVKEDMFNIGRF-KRLKVA-AVYGKAPFYHQEKELKQKTHVVVGTPGRIIDHM 137
Query: 691 VKFGMFDMGKIKVFCV 738
K G FD +IK +
Sbjct: 138 EK-GTFDTSQIKYLVI 152
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/101 (33%), Positives = 57/101 (56%)
Frame = +2
Query: 269 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 448
++P + F L L +++ V +G+ PS IQ +P LLA ++++ Q+Q+GTGK
Sbjct: 8 SNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAG--RDVLGQAQTGTGK 65
Query: 449 TAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKW 571
TAAF L +L+R N+ PQ VL P ++ + Q++
Sbjct: 66 TAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEAFQRY 106
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ LLK + G++ PS IQ+ A P L+ ++++ Q+Q+GTGKTAAF L +L
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLG--RDLVGQAQTGTGKTAAFALPLL 130
Query: 476 SRVDSNKNYPQYCVLVP 526
R++S + PQ VL P
Sbjct: 131 ERLESGQKTPQVLVLAP 147
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+K F ALHL+ +++G+ A F P+KIQ A+P L +++ QS+SGTGKT +V+
Sbjct: 24 MKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTG--MDLLVQSKSGTGKTLIYVV 81
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
L + +P+ V++P
Sbjct: 82 TALQMCSLSTQHPEVLVILP 101
Score = 33.1 bits (72), Expect = 7.7
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG-SKITD-HILIGTPGKMFDWGVK 696
PT ELA+Q ++ + + K+ + G ++ R K+ + H+ IGTPG++ K
Sbjct: 101 PTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDVTRDREKLRNCHVAIGTPGRLLQLHEK 160
Query: 697 FGMFDMGKIKV 729
G+ +M +K+
Sbjct: 161 -GVLNMSMVKL 170
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/77 (38%), Positives = 52/77 (67%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE LK LL G++ MG+ PS IQE ++P L+ ++++A++++GTGK+ A+++ +L
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 155
Query: 476 SRVDSNKNYPQYCVLVP 526
R+D K+ Q V+VP
Sbjct: 156 ERLDLKKDNIQAMVIVP 172
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE LKP ++ V+ +GF P+ IQ+ +P +L +++I QSQ+GTGKT A++L +L
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKK--ESVIGQSQTGTGKTHAYLLPLL 63
Query: 476 SRVDSNKNYPQYCVLVP 526
+++D K+ Q + P
Sbjct: 64 NKIDPAKDVVQVVITAP 80
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +L L NLL+ + G+ PS IQE ++P LL ++++ +Q+GTGKTAAF L +L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEG--KDVLGLAQTGTGKTAAFTLPLL 65
Query: 476 SRVDSNKNYPQYCVLVP 526
+R + PQ VL P
Sbjct: 66 ARTQNEVREPQVLVLAP 82
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TFE L +LK + ++G+N PS++Q +P LL QN++ +S++G+GKTA+F + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKG--QNLVVRSKTGSGKTASFAIPL 61
Query: 473 LSRVDSNKNYPQYCVLVP 526
++ + N Q ++VP
Sbjct: 62 CENINVDYNNIQALIVVP 79
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 61.3 bits (142), Expect = 3e-08
Identities = 31/89 (34%), Positives = 53/89 (59%)
Frame = +2
Query: 305 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 484
L +KP L + +GF AP+ IQE A+P +L +++IA+S +GTGKT A+++ +L R+
Sbjct: 15 LKMKPFLQETWNRVGFTAPTPIQEEAIPLILEG--KDLIAESPTGTGKTLAYLIPILHRI 72
Query: 485 DSNKNYPQYCVLVPHMN*PYKLVKLLQKW 571
D Q +L P ++ + ++KW
Sbjct: 73 DPESKAVQAVILAPSHELAMQIHQTIEKW 101
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ L LK +LLK + MGF PS+IQ ++P L ++I Q+Q+GTGKTAAF A++
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEG--HDIIGQAQTGTGKTAAFGCAII 63
Query: 476 SRVD--SNKNYPQYCVLVP 526
+ D K P+ +L P
Sbjct: 64 NNADFSGKKKSPKALILAP 82
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/68 (41%), Positives = 47/68 (69%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ LK +LKG+ GF+ PS +Q ++P +L +++IAQ+Q+GTGKTAAF + +L
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQG--KDLIAQAQTGTGKTAAFAIPIL 104
Query: 476 SRVDSNKN 499
+ ++ NK+
Sbjct: 105 NTLNRNKD 112
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 60.5 bits (140), Expect = 4e-08
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+FE L L L V GF P+ IQ A+P LLA N+IA++++GTGKTAAF L +
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDA-NIIAKARTGTGKTAAFGLPL 105
Query: 473 LSRVDSNKNYPQYCVLVP 526
+ + S +P VLVP
Sbjct: 106 IQELGSPCEHPGALVLVP 123
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTFE L L+P+L++ + MG P+ IQE A+P +L ++++A++++G+GKT A++L
Sbjct: 24 KTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEG--KDVVARAKTGSGKTFAYLLP 81
Query: 470 MLSRV-----DSNKNYPQYCVLVP 526
+L ++ NK P VLVP
Sbjct: 82 LLQKLFCESESRNKLAPSAFVLVP 105
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L L +LL+ V +MGF + IQ +P L +++I Q+Q+GTGKTAAF L +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQG--KDIIGQAQTGTGKTAAFGLPL 60
Query: 473 LSRVDSNKNYPQYCVLVP 526
L +VD++K Q V+ P
Sbjct: 61 LDKVDTHKESVQGIVIAP 78
Score = 36.7 bits (81), Expect = 0.62
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR---GSKITDHILIGTPGKMFD 684
PT ELAIQ GE K+ K +++ G+++ R K HI++GTPG++ D
Sbjct: 78 PTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILD 133
>UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP10 -
Ustilago maydis (Smut fungus)
Length = 1154
Score = 60.5 bits (140), Expect = 4e-08
Identities = 20/65 (30%), Positives = 48/65 (73%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F+++ L P+LL+ + GF P+ IQ A+P +++ PP++++ +++G+GKT A+++ +
Sbjct: 145 SFQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTLAYLIPL 204
Query: 473 LSRVD 487
++R++
Sbjct: 205 INRLN 209
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +2
Query: 272 SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 451
+PL +V FE+ L ++ + MGF P+ IQ ALP LLA + I + +GTGKT
Sbjct: 38 TPLTTVDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAG-ANDFIGLASTGTGKT 96
Query: 452 AAFVLAMLSRVDSNKNYPQYCVLVP 526
AAF + ++ +DS Q VL P
Sbjct: 97 AAFGIPLIENIDSTVKDTQALVLSP 121
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 60.1 bits (139), Expect = 6e-08
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L L +L++GV AMG+ P+ +Q A+P +LA ++++A +Q+GTGKTAAF L +L
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAG--RDLVASAQTGTGKTAAFALPVL 60
Query: 476 SRVDSNK-NYPQYCVLVP 526
+R+ ++ P+ VL P
Sbjct: 61 ARLGGHRPGGPRVLVLEP 78
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 60.1 bits (139), Expect = 6e-08
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = +2
Query: 251 NKRKDPNSPLYSVK-TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQ 427
N ++ + LY K T+E L + L++ + + F PSKIQ ALP +L+ +N+IAQ
Sbjct: 146 NNKESSDFKLYHSKNTWEELKIDNELIQILTYLKFLGPSKIQAYALPIILSSN-KNLIAQ 204
Query: 428 SQSGTGKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
SQ+G+GKT FV+AML +++ + Q + P
Sbjct: 205 SQNGSGKTLTFVIAMLCKINRTLSSLQAVCICP 237
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/80 (35%), Positives = 50/80 (62%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+++F+ L L +L+ + GF P+ IQE A+P L+ + ++++ Q+Q+GTGKTAAF +
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILI-EGKRDIVGQAQTGTGKTAAFGI 59
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+L +D + Q +L P
Sbjct: 60 PILETIDESSRNTQALILAP 79
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = +2
Query: 281 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF 460
+S ++E L + L++ + + F PSKIQ ALP +L D +N+IAQSQ+G+GKT F
Sbjct: 221 HSKNSWEELKIDNELIQILTYLKFFGPSKIQAYALPIIL-DSNRNLIAQSQNGSGKTLTF 279
Query: 461 VLAMLSRVD 487
V+AMLS+++
Sbjct: 280 VIAMLSKIN 288
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F L + ++ + +GF AP+ IQ A+P LL+ ++++ QSQ+GTGKTAAF L +
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSG--RDVVGQSQTGTGKTAAFSLPI 61
Query: 473 LSRVDSNKNYPQYCVLVP 526
L R+D + Q VL P
Sbjct: 62 LERLDPQQKAVQAIVLTP 79
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/77 (36%), Positives = 48/77 (62%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L L +LK + +G P+ IQE A+P +L +N+I ++++GTGKT A++L ++
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKG--KNVIGKAETGTGKTLAYLLPII 61
Query: 476 SRVDSNKNYPQYCVLVP 526
++D +KN Q +L P
Sbjct: 62 EKIDDSKNEMQAIILSP 78
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/68 (38%), Positives = 45/68 (66%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ LKP LL+ + GF PS++Q+ +P + +++ Q++SG GKTA FVL++L
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGT--DILCQAKSGMGKTAVFVLSIL 114
Query: 476 SRVDSNKN 499
++D+N+N
Sbjct: 115 QQLDTNEN 122
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/90 (34%), Positives = 52/90 (57%)
Frame = +2
Query: 260 KDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSG 439
KD Y+V F+ LK LL+ V GF P+++Q +L L + +I Q+++G
Sbjct: 63 KDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLG--EQLICQAKAG 120
Query: 440 TGKTAAFVLAMLSRVDSNKNYPQYCVLVPH 529
TGKTA FVL +L+ +++ N + C+++ H
Sbjct: 121 TGKTAVFVLTVLNTINTESNKVE-CLVITH 149
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF +L L +L V MGF P+ IQ A+P LL ++++ +Q+GTGKTAAF L +
Sbjct: 46 TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLE--LRDVVGIAQTGTGKTAAFGLPL 103
Query: 473 LSRVDSNKNYPQYCVLVP 526
L+ VD+++ Q VL P
Sbjct: 104 LAIVDADERNVQALVLAP 121
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/80 (35%), Positives = 49/80 (61%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ +F+ + +K +LL+G+YA F PS +Q+ A+ ++ ++IAQ+QSGTGKT+ F L
Sbjct: 275 IMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQG--HDVIAQAQSGTGKTSMFAL 332
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+ VD++ Q + P
Sbjct: 333 TVYQMVDTSNREVQALISSP 352
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/77 (36%), Positives = 48/77 (62%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F+ L ++L G+ MG+ PS+IQ A+P +L +N++ QSQSG+GKT AF+L+
Sbjct: 26 SFQECKLNEDILDGINGMGYITPSQIQSYAIPIILKG--KNLVMQSQSGSGKTMAFLLST 83
Query: 473 LSRVDSNKNYPQYCVLV 523
L ++ + Q ++V
Sbjct: 84 LQLINRKDPFCQVIIIV 100
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF + LL + +MGFN P+ IQ A+P ++++ +++A +Q+GTGKTAA++L +
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSN--SDLVACAQTGTGKTAAYMLPI 59
Query: 473 LSR-VDSNKNYPQYCVLVP 526
L + ++SN + VLVP
Sbjct: 60 LHKIIESNTDSLDTLVLVP 78
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/81 (39%), Positives = 53/81 (65%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S K F +L L +L+K V ++G+ ++IQE +LP +L +++IAQ+++GTGKTAAF
Sbjct: 2 SSKDFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDG--KDLIAQAKTGTGKTAAFG 59
Query: 464 LAMLSRVDSNKNYPQYCVLVP 526
L +LS++ + Q +L P
Sbjct: 60 LGVLSKLVLDDYRIQVLILCP 80
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/80 (33%), Positives = 50/80 (62%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V +F+ L + ++ +G+ G P+ IQ+ A+P L + +++I QSQ+G+GKT A++L
Sbjct: 2 VTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKN--KDIIGQSQTGSGKTLAYLL 59
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+ ++DS+K Q +L P
Sbjct: 60 PIFQKIDSSKRETQALILAP 79
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TFE LHL LLK V +GF+ P+ IQ A+P LA ++++A + +G+GKTAAF+L +
Sbjct: 191 TFEELHLSRPLLKAVQKLGFSQPTPIQAKAIP--LALNGKDILASASTGSGKTAAFLLPV 248
Query: 473 LSRV---DSNKNYPQYCVLVP 526
L R+ DS + +L+P
Sbjct: 249 LERLLFRDSEYRAIRVLILLP 269
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/77 (36%), Positives = 54/77 (70%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
+E+L L P LLK + +G++ PS +Q ++P +L +N++ +S++GTGKTA++++ ML
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGG--KNLLVRSKNGTGKTASYIVPML 167
Query: 476 SRVDSNKNYPQYCVLVP 526
+ ++S++ Q +LVP
Sbjct: 168 NMINSSELSIQGIILVP 184
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/66 (37%), Positives = 45/66 (68%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+A+ L NLLK + GF+ P+ IQ +P ++ D Q+++ +++G+GKTAAFV+ M+
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMED--QDVVGMARTGSGKTAAFVIPMI 150
Query: 476 SRVDSN 493
++ S+
Sbjct: 151 EKLKSH 156
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L L +LK + MGF PS IQ A+P LL +++I Q+Q+GTGKTAAF + +
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQG--KDVIGQAQTGTGKTAAFGVPI 64
Query: 473 LSRVDSNKNYPQYCVLVP 526
+ R+ + Q VL P
Sbjct: 65 VERLVPGQRAVQALVLTP 82
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/96 (30%), Positives = 57/96 (59%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L+L P L + + MG+ ++IQE A+P L Q++I +S +GTGKT AF++ +L
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNS--QDIIGKSHTGTGKTVAFIVPIL 60
Query: 476 SRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFV 583
++++ PQ +L P ++++ ++K+ ++
Sbjct: 61 QNLNTHLKQPQAIILCPTHELASQIIEQVRKFATYL 96
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE +L+ +L+ V + F P++IQ +P +L N+I QSQ+GTGK+ AF+L ++
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRT--NLIGQSQTGTGKSHAFLLPLM 63
Query: 476 SRVDSNKNYPQYCVLVP 526
+DS PQ V+ P
Sbjct: 64 QLIDSEIKEPQAIVVAP 80
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/77 (38%), Positives = 52/77 (67%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE LK LL G++ MG+ PS IQE ++P L+ ++++A++++GTGK+ A+++ +L
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 140
Query: 476 SRVDSNKNYPQYCVLVP 526
R+D K+ Q V+VP
Sbjct: 141 ERLDLKKDNIQAMVIVP 157
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/80 (33%), Positives = 50/80 (62%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+++F+ L L NL++G+ G N P+ IQ +P L + +++I QS +G+GKT A++L
Sbjct: 2 IESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALEN--KDVIGQSPTGSGKTLAYLL 59
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+ ++D++K Q +L P
Sbjct: 60 PIFQKIDTSKREMQAIILAP 79
>UniRef50_A2E7Z7 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Trichomonas vaginalis G3|Rep:
Helicase conserved C-terminal domain containing protein
- Trichomonas vaginalis G3
Length = 528
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +2
Query: 314 KPNLLKGVYAMG-FNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVD- 487
K + ++ +Y G PS IQ A+P LL +PP++++AQ+ +G GKT AF+L M RVD
Sbjct: 66 KIDAIQSIYMKGNIQHPSYIQTRAIPYLLENPPKSILAQASTGEGKTLAFILPMYLRVDL 125
Query: 488 SNKNYPQYCV 517
N N CV
Sbjct: 126 ENPNIQAICV 135
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 57.2 bits (132), Expect = 4e-07
Identities = 41/156 (26%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F LK +LL+ V GF PS++Q +P + ++++ Q+++GTGKTA FVL++
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHG--KDVLCQAKAGTGKTAVFVLSV 96
Query: 473 LSRVDSNKNYPQYCVLVPH-MN*PYKL---VKLLQKWQNFVLK*S*SMQLEGKNFPGVQK 640
L+++ + P C+++ H +++ K L K+ NF +K E + ++
Sbjct: 97 LNQLPDDAK-PFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKT 155
Query: 641 SQITFLLVLQERCLIGVSSLACLIWVK-LKFFVLDE 745
+ L+ RCL + + +I + +++F++DE
Sbjct: 156 KKPHILVATPGRCLSLIKAKPSVIETQNIEYFIIDE 191
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTF+ L L P +LK V +G+ P++IQE ++P L +++I +Q+G+GKTA+F+L
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVAL--QKKDIIGIAQTGSGKTASFLLP 66
Query: 470 MLSRV--DSNKNYPQYCVLV 523
M+ + KN YC+++
Sbjct: 67 MVQHLLNVKEKNRGFYCIII 86
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TFE+L L P L++ + A+G+ P+ IQ ALP LL ++++ + +GTGKTAAF L +
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEG--KDLLGIAATGTGKTAAFSLPL 94
Query: 473 LSRVDSNKNYP---QYCVLVP 526
L R+ + P VLVP
Sbjct: 95 LQRITPGAHAPFTASALVLVP 115
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
K F L L +++ V +G+ P+ IQ+ A+P +L+ ++++ Q+Q+GTGKTAAF L
Sbjct: 7 KDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSG--RDVLGQAQTGTGKTAAFALP 64
Query: 470 MLSRVD--SNKNYPQYCVLVP 526
+++ +D S PQ VL P
Sbjct: 65 LINNMDLASRDRAPQVLVLAP 85
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 57.2 bits (132), Expect = 4e-07
Identities = 38/124 (30%), Positives = 72/124 (58%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ L LK +LL G+ +G+ PS IQE +P LA ++++A+S++GTGKT +F++ +L
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIP--LAINNKDILARSKNGTGKTLSFLIPIL 74
Query: 476 SRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEGKNFPGVQKSQITF 655
+ S + +LVP ++ LL+K ++ + ++Q+ G + + K+ I F
Sbjct: 75 QNIYSESYGIESIILVPTRELALQISSLLRKLSKYMK--NINLQVTGVD-SKIDKNNIDF 131
Query: 656 LLVL 667
++L
Sbjct: 132 NILL 135
Score = 39.1 bits (87), Expect = 0.12
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFD 684
PT ELA+Q + K++K+ I L+ ++ + + I +IL+GTPGK++D
Sbjct: 91 PTRELALQISSLLRKLSKYMKNINLQVTGVDSKIDKNN-IDFNILLGTPGKIYD 143
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/77 (38%), Positives = 48/77 (62%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L+L P++++ V+ MGF + IQE A+P LA +++I Q+++GTGKTAAF + M+
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIP--LAMEGKDLIGQARTGTGKTAAFGIPMV 61
Query: 476 SRVDSNKNYPQYCVLVP 526
+ Q V+VP
Sbjct: 62 EAIRPTSKGVQGLVVVP 78
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTF + LL+ + MGF P+ IQ A+P +L +++ Q+Q+GTGKTAAF +
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDG--KDVTGQAQTGTGKTAAFGIP 62
Query: 470 MLSRVDSNKNYPQYCVLVP 526
++ R+D + Q VL P
Sbjct: 63 IIERLDPDNKNVQALVLSP 81
Score = 37.9 bits (84), Expect = 0.27
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKITDHILIGTPGKMFDWGV 693
PT ELAIQT E +++ K+ + + G+ + R K T ++IGTPG++ D +
Sbjct: 81 PTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALKGTVQVVIGTPGRVID-HI 139
Query: 694 KFGMFDMGKIKVF 732
K G + + +F
Sbjct: 140 KRGTLHLDSVTMF 152
>UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;
n=10; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 47 - Arabidopsis thaliana (Mouse-ear cress)
Length = 551
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +2
Query: 272 SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 451
SPL+S K+FE L L +LL + GF+ P+ +Q A+P ++ + + QS +G+GKT
Sbjct: 104 SPLFSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKG--HDAVIQSYTGSGKT 161
Query: 452 AAFVLAMLSRV 484
A++L +LS +
Sbjct: 162 LAYLLPILSEI 172
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 56.4 bits (130), Expect = 7e-07
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
++ F+ L L LLK V +GF P+ IQ+ A+P +L N++ Q+ +GTGKTAA++L
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEG--HNLVGQAPTGTGKTAAYLL 58
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+L R+ K Q ++ P
Sbjct: 59 PVLQRIQRGKK-AQVLIVTP 77
Score = 33.1 bits (72), Expect = 7.7
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR---GSKITDHILIGTPGKMFD 684
PT ELA+Q + AK+ K+ +++ G+ + R G + +++GTPG++ D
Sbjct: 77 PTRELALQVADEVAKLGKYL-KVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILD 132
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 56.4 bits (130), Expect = 7e-07
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L L L+K V +G+ P+ IQ A+P++LA +N++A +Q+GTGKTA+FVL +L
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAG--KNVLAAAQTGTGKTASFVLPLL 60
Query: 476 SR-VDSNKNYPQ 508
R D+ K P+
Sbjct: 61 HRFADAPKIRPK 72
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 56.4 bits (130), Expect = 7e-07
Identities = 24/66 (36%), Positives = 48/66 (72%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE++ L P L + + + GFN P+ IQ A+P +LA ++++A S++G+GKTAAF++ ++
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAG--RDIVACSKTGSGKTAAFLIPLI 69
Query: 476 SRVDSN 493
+++ ++
Sbjct: 70 NKLQNH 75
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/100 (26%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F+ +L ++LK + G++ P+ IQ ++P ++ + ++++A +Q+GTGKTAAFVL +
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLN--KHVLASAQTGTGKTAAFVLPI 59
Query: 473 LSRVDSNKNY---PQYCVLVPHMN*PYKLVKLLQKWQNFV 583
L ++ N++ P+ ++ P ++ ++K+ ++
Sbjct: 60 LDKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYL 99
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 56.0 bits (129), Expect = 9e-07
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L L +L + MGF +P+ IQ A+P LL ++ + ++Q+GTGKTAAF L +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEG--RDALGKAQTGTGKTAAFSLPLL 85
Query: 476 SRVDSNKNYPQYCVLVP 526
++++ ++ PQ V+ P
Sbjct: 86 NKLNLSQYKPQAIVMAP 102
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF+ L L +L + FN ++IQ A+P L +N+ +S +GTGKTA+FVL +
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEG--KNIFGKSSTGTGKTASFVLPI 59
Query: 473 LSRVDSNKNYPQYCVLVP 526
L +++ NK Q ++ P
Sbjct: 60 LEKIEPNKRRVQAVIMAP 77
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L LK +L+ + +G+ PS IQ +P LL ++++ +Q+G+GKTAAF L +
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNG--RDVLGMAQTGSGKTAAFSLPL 64
Query: 473 LSRVDSNKNYPQYCVLVP 526
L +D PQ VL P
Sbjct: 65 LQNLDPELKAPQILVLAP 82
Score = 33.1 bits (72), Expect = 7.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKITDHILIGTPGKMFDWGV 693
PT ELA+Q E +K + + G+ R + I++GTPG++ D +
Sbjct: 82 PTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLD-HL 140
Query: 694 KFGMFDMGKI 723
K G D+ K+
Sbjct: 141 KRGTLDLSKL 150
>UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep:
SrmB - Mycoplasma gallisepticum
Length = 457
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +2
Query: 314 KPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSN 493
K + K + AMG + P+KIQ+ A+P LL +N+I + +GTGKT AF+L +L +D
Sbjct: 9 KEFIAKTLKAMGIHEPTKIQKEAIPPLLKQ--KNLIGVAPTGTGKTLAFLLPILQNLDFA 66
Query: 494 KNYPQYCVLVP 526
+N Q ++VP
Sbjct: 67 QNLIQAVIIVP 77
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/81 (37%), Positives = 50/81 (61%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S F L L P LL V +GF + IQ+ ++P LLA +++I Q+++G+GKTAAF
Sbjct: 45 SQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAG--KDIIGQAKTGSGKTAAFS 102
Query: 464 LAMLSRVDSNKNYPQYCVLVP 526
L +L++++ ++ Q +L P
Sbjct: 103 LPILNKINLDQPLLQALILCP 123
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/77 (33%), Positives = 44/77 (57%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ L LK +L +Y G+ P+ IQ +L +L Q+ + ++++GTGKTAAF + L
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQG--QDALVRAKTGTGKTAAFAIPAL 64
Query: 476 SRVDSNKNYPQYCVLVP 526
+ + +PQ +L P
Sbjct: 65 QHLRAEVQHPQVLILTP 81
>UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTFE L L+P+L++ + G P+ IQE A+P +L ++++A++++G+GKT A++L
Sbjct: 24 KTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEG--KDVVARAKTGSGKTFAYLLP 81
Query: 470 MLSRVDS-----NKNYPQYCVLV 523
+L ++ S NK P VLV
Sbjct: 82 LLQKLFSESESRNKLAPSAFVLV 104
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/94 (29%), Positives = 53/94 (56%)
Frame = +2
Query: 245 YRNKRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIA 424
+ +++ N PL T+E++ LKP L++ + G+ PS IQ+ A+ + +N++
Sbjct: 5 HEDRQFQSNVPLEVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAI--YIISQGKNIMF 62
Query: 425 QSQSGTGKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
QSQ+G+GKTA F + L+R+ + ++ P
Sbjct: 63 QSQNGSGKTATFSIGTLARLRLTSKTTELIIVSP 96
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L + + K + MGF PS IQ A+P +LA ++I Q+Q+GTGKTAAF + ++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAG--GDVIGQAQTGTGKTAAFGIPVV 65
Query: 476 SRVDSNKNYPQYCVLVP 526
+V + + + Q +L P
Sbjct: 66 EKVSTGR-HVQALILTP 81
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 55.2 bits (127), Expect = 2e-06
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +2
Query: 266 PNSPLY-SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGT 442
PN L ++ F AL L P L G+ A+G+ + +Q +LP +L ++IAQ+ +G+
Sbjct: 17 PNPGLKCAMNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRG--LDVIAQAPTGS 74
Query: 443 GKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQK 568
GKTAAF L +L ++D Q VL P ++ K L+K
Sbjct: 75 GKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRK 116
Score = 33.9 bits (74), Expect = 4.4
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD------HILIGTPGKM 678
PT ELA Q G+ K+A P +KL G +P G ++ H+++GTPG++
Sbjct: 102 PTRELADQVGKQLRKLATGIPNMKLVVLTGG--MPLGPQLASLEAHDPHVVVGTPGRI 157
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/95 (30%), Positives = 53/95 (55%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ L L P +++ + ++G++ + IQE +P L+ +++ Q+Q+GTGKTAAF + +
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTG--KDLTGQAQTGTGKTAAFGIPAI 60
Query: 476 SRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNF 580
VD + N Q +L P ++ L+K F
Sbjct: 61 EHVDISINQTQSLILCPTRELALQVCTELKKLSKF 95
Score = 36.7 bits (81), Expect = 0.62
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR---GSKITDHILIGTPGKMFD 684
PT ELA+Q K++KF +++ GE + R K HI++GTPG++ D
Sbjct: 77 PTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAHIVVGTPGRIID 133
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 55.2 bits (127), Expect = 2e-06
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Frame = +2
Query: 266 PNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 445
P+S S +F L L P LL+ V F P+ +Q A+P LA ++++A++++G+G
Sbjct: 35 PSSEAASSSSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIP--LALEGRDVLAKAKTGSG 92
Query: 446 KTAAFVLAMLSRVDSNK------NYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQ 607
KTAA+VL +L V K Y +LVP ++ K ++++ F K +
Sbjct: 93 KTAAYVLPILQAVLKRKQINPGATYISSLILVPTRELTVQVTKEVERFSAFCAKEVQVVG 152
Query: 608 LEGKNFPGVQKS 643
L K VQ+S
Sbjct: 153 LTDKVSDAVQRS 164
>UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP10 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 802
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
+ AL++ P+L++ + F P+ IQ A+P L+ PP++++ +++G+GKT A+++ +L
Sbjct: 29 WRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIPLL 88
Query: 476 SRVDSNKN--YPQYCVLVP 526
R S + P+ +L P
Sbjct: 89 QRTGSTHHGQGPRALILCP 107
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVY-AMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+T+ LH + ++ + A GF P+ +QE A ++ +++IA+S +GTGKT A+ L
Sbjct: 3 QTWPFLHNAQSFIQENWNASGFQKPTPVQEQAAQLIMDG--KDVIAESPTGTGKTLAYAL 60
Query: 467 AMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQ 574
+L R+ + +PQ +L P ++ +++Q W+
Sbjct: 61 PVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWK 96
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/68 (39%), Positives = 42/68 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE L +L + G+ P++IQ+ LP L+ +++IAQ+Q+GTGKTAAF + +L
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTD-KDLIAQAQTGTGKTAAFGIPLL 78
Query: 476 SRVDSNKN 499
R+D N
Sbjct: 79 ERIDFKAN 86
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = +2
Query: 263 DPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGT 442
D L + F + L LLK +Y GF PS IQ++A+P +L N++ QS+SGT
Sbjct: 42 DRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRG--HNVVVQSKSGT 99
Query: 443 GKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
GKT A+ +L + Q V+ P
Sbjct: 100 GKTIAYTCGVLGNTKIGER-TQVMVVTP 126
>UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 606
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
T+++L+L P LL+ + +GF P+ IQ +A+P L + +++IA++ +G+GKTAA+ + +
Sbjct: 21 TWDSLNLDPRLLQAIDKLGFENPTLIQSSAIP-LALEEKRDIIAKASTGSGKTAAYAIPI 79
Query: 473 LSR--VDSNKNYPQYCVLVPH---MN*PYKLVKLLQKWQN 577
+ V ++ Q VLVP N Y+ ++ L K+ N
Sbjct: 80 IQNIMVQGSQLGTQSVVLVPTRELSNQVYQFMEQLIKFSN 119
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F+ L L P + + V GF PS IQ +P L +++I Q+++GTGKTAAF + +
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNG--KDVIGQARTGTGKTAAFSIPI 102
Query: 473 LSRVDSNKNY--PQYCVLVP 526
L ++DS ++ PQ V+VP
Sbjct: 103 LEQLDSLEDCRDPQAIVIVP 122
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F L P L++ V A GF P+ IQE ALP LA Q+++ + +GTGKTAAFVL +
Sbjct: 57 SFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAG--QDILGLAATGTGKTAAFVLPL 114
Query: 473 LSRV 484
L R+
Sbjct: 115 LHRL 118
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/69 (37%), Positives = 45/69 (65%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+FEAL L+ L+ + G++ + IQ A+P +LA +++A +Q+GTGKTAAF L +
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQ--HDLLAVAQTGTGKTAAFTLPL 59
Query: 473 LSRVDSNKN 499
L R+ + ++
Sbjct: 60 LQRLAAKQS 68
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 54.4 bits (125), Expect = 3e-06
Identities = 32/81 (39%), Positives = 45/81 (55%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S +F L L L + + A GF+APS +Q +P L ++IAQ++SGTGKT FV
Sbjct: 35 SSASFGDLQLDERLTRALRAAGFDAPSPVQLACVP--LGRFGCDVIAQAKSGTGKTMTFV 92
Query: 464 LAMLSRVDSNKNYPQYCVLVP 526
+ L RVD+ + Q L P
Sbjct: 93 VIALERVDAGRRRTQALALAP 113
>UniRef50_Q7QV50 Cluster: GLP_435_34658_36088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_435_34658_36088 - Giardia lamblia
ATCC 50803
Length = 476
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/78 (28%), Positives = 49/78 (62%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
++E L + ++++ ++A GF+ P+K Q A+ +L D ++ + ++ +GTGKT +F+
Sbjct: 25 SWEKLSVPESIMELLHASGFHMPTKTQVAAIKPILCDRKRSGLLEAPTGTGKTISFLTVA 84
Query: 473 LSRVDSNKNYPQYCVLVP 526
+S + +K+ PQ ++ P
Sbjct: 85 MSHITPDKSLPQAVIIAP 102
>UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: RNA
helicase - Lactobacillus acidophilus
Length = 453
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/91 (28%), Positives = 53/91 (58%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE + P L +G+ + F P+K+QE +P +L+D +++ Q+ +G+GKT A+++ +
Sbjct: 5 FEDSRINPALQEGLKKINFVKPTKVQEKVIPAMLSD--LSVVVQAATGSGKTHAYLVPIF 62
Query: 476 SRVDSNKNYPQYCVLVPHMN*PYKLVKLLQK 568
+ +D +Y Q V +P +L ++ +K
Sbjct: 63 NEIDEAAHYVQAIVTLPSRELADQLYQVARK 93
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 54.0 bits (124), Expect = 4e-06
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +LHL P LLK + +GF P+ IQ A+P ++ ++++A + +G+GKTAAF+L +L
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSG--RDVMASAVTGSGKTAAFLLPIL 60
Query: 476 SR-VDSNKNYPQYCVLVP 526
+ +D + + V+ P
Sbjct: 61 HQLIDRPRGTTRALVITP 78
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/78 (33%), Positives = 47/78 (60%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L + +LK + MGF P+++Q A+P +L + +++I S++G+GKTA F +++
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNN--EDLIVMSKTGSGKTAVFGVSI 61
Query: 473 LSRVDSNKNYPQYCVLVP 526
L + + PQ +L P
Sbjct: 62 LQLTNPEEAGPQGLILTP 79
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 54.0 bits (124), Expect = 4e-06
Identities = 28/76 (36%), Positives = 50/76 (65%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +L LK LL G+ GF + +QE A+P +LA ++++A++++GTGKT +F++ +L
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILAR--RDVVARAKNGTGKTGSFLIPIL 80
Query: 476 SRVDSNKNYPQYCVLV 523
V+ K++ Q VL+
Sbjct: 81 QMVNPAKDHIQALVLL 96
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/69 (36%), Positives = 45/69 (65%)
Frame = +2
Query: 320 NLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKN 499
+L+K +Y GF PS +Q+ ++P L+ Q++ +Q+G+GKTAAF +++LS V+ K+
Sbjct: 13 DLIKAIYKYGFEIPSPVQQYSIPKLIQG--QSISVNAQTGSGKTAAFGISLLSLVNPQKS 70
Query: 500 YPQYCVLVP 526
Q ++ P
Sbjct: 71 ICQAVIISP 79
>UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1029
Score = 54.0 bits (124), Expect = 4e-06
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F L L P L++ V F P+ +Q A+P LA Q+++ ++++G+GKTAA+VL +
Sbjct: 307 SFAELGLDPRLVQAVAKQSFEKPTLVQRKAIP--LALQGQDVLCKAKTGSGKTAAYVLPV 364
Query: 473 LSRVDSNKN-----YPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEGKNFPGVQ 637
LS + K+ + +LVP ++ K ++++ F K + +L VQ
Sbjct: 365 LSAILKRKSTDPAPFTAGLILVPTRELADQVFKAIEQFSAFCAKDIHAAKLTENVSDAVQ 424
Query: 638 KSQIT----FLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
+S + ++ R V+S A L +L++ VLDEA
Sbjct: 425 RSLLANVPDIVVSTPARAWHSVNSSA-LSLSQLQYLVLDEA 464
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F++L L P++L+ V G+ P+ IQ+ A+P +L ++++A +Q+GTGKTA F L +
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG--RDLMASAQTGTGKTAGFTLPL 59
Query: 473 LSRV 484
L +
Sbjct: 60 LQHL 63
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +2
Query: 257 RKDPNSPLYSVKT---FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQ 427
RK+ N+P S K F+A+ L LLK + GF P+ IQ A+P +L +++
Sbjct: 64 RKNANAPGKSGKKGGGFQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQG--DDVVGM 121
Query: 428 SQSGTGKTAAFVLAMLSRVDSN 493
+++G+GKTAAFV+ M+ R+ ++
Sbjct: 122 ARTGSGKTAAFVIPMIERLKTH 143
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 53.6 bits (123), Expect = 5e-06
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F L L +L V A G+ P+ IQE A+P +LA ++++ +Q+GTGKTAAFVL M
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLA--RKDVLGIAQTGTGKTAAFVLPM 59
Query: 473 LSRVDSNK---NYPQYCVLVP 526
L+ ++ + P+ +L P
Sbjct: 60 LTILEKGRARARMPRTLILEP 80
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F + L +L+ + AM F P+ IQ A+P LL Q+++ ++Q+GTGKTAAF L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEG--QDVLGEAQTGTGKTAAFGLPA 66
Query: 473 LSRVDSNKNYPQYCVLVP 526
L+++D++ Q V+ P
Sbjct: 67 LAKIDASVKQTQVLVVTP 84
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/80 (31%), Positives = 47/80 (58%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+KTF + +++KG+ +GF+ + +QE +P +L + +++ +Q+GTGKTAAF +
Sbjct: 1 MKTFAEFEINTDIMKGLDGLGFSVMTPVQEKIIPIVL-NRQTDLVGLAQTGTGKTAAFGI 59
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
++ D+ Q VL P
Sbjct: 60 PLIQLTDTRLKRTQALVLCP 79
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 53.6 bits (123), Expect = 5e-06
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S +F LHL P L + GF P+ IQ A+P LA +++I + +GTGKTAAF+
Sbjct: 2 STTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAG--KDVIGTAATGTGKTAAFL 59
Query: 464 LAMLSRVDSNKNYPQYCVLVP 526
L ++ R+ + K + VL P
Sbjct: 60 LPLIDRL-AGKPGTRALVLAP 79
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/64 (35%), Positives = 43/64 (67%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF++ P LL+ + +G++ P+ IQ P++LA ++++A +++G+GKTA FVL M
Sbjct: 5 TFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAG--RDVVAMARTGSGKTAGFVLPM 62
Query: 473 LSRV 484
+ R+
Sbjct: 63 IERL 66
>UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 649
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +2
Query: 239 TRYRNKRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNM 418
T +++ NS L S + L L +L+K V+ MG+ APS IQ +P L +++
Sbjct: 108 TESSTSKQEVNSHLTSDTNWSDLGLSRSLIKAVFDMGYKAPSIIQSKVIPVALEG--KDL 165
Query: 419 IAQSQSGTGKTAAFVLAMLSRV 484
+A +++G+GK+AAF++ L R+
Sbjct: 166 LATAETGSGKSAAFLIPTLQRL 187
>UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
dbp-9 - Neurospora crassa
Length = 676
Score = 53.6 bits (123), Expect = 5e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L L P L++ V F P+ +Q A+P LA Q+++ ++++G+GKTAA+VL +
Sbjct: 96 TFSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAG--QDVLCKAKTGSGKTAAYVLPV 153
Query: 473 LSRVDSNK-----NYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEGKNFPGVQ 637
LS + K + +LVP ++ K + + F K S +L V
Sbjct: 154 LSGILKRKATDPTPFTSALILVPTRELADQVHKAIDAFSAFCTKDIQSAKLTDNVSDAVL 213
Query: 638 KSQIT----FLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
+S + ++ R + S A + KL++ VLDEA
Sbjct: 214 RSLLANAPDVIVSTPARAWHNIESGALSV-AKLQYLVLDEA 253
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/77 (37%), Positives = 45/77 (58%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +L P +LK + M F PS+IQ A+P L Q++IA SQ+G+GKTA + +
Sbjct: 17 FITFNLDPLILKALDKMNFKEPSRIQTEAIP--LIQKKQDLIALSQTGSGKTATCAIPIC 74
Query: 476 SRVDSNKNYPQYCVLVP 526
+RV++ Q ++VP
Sbjct: 75 NRVNTELTDIQALIIVP 91
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/61 (42%), Positives = 42/61 (68%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE+ L P + K + GFN P+ IQ ++P +LA ++++A +Q+GTGKTAAFV+ +L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAG--EDVLAIAQTGTGKTAAFVIPVL 60
Query: 476 S 478
+
Sbjct: 61 N 61
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 53.2 bits (122), Expect = 7e-06
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 7/159 (4%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F L L P +LK + +NAP IQE A+P +L ++++ +Q+G+GKTA+FVL +
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKG--KDILGIAQTGSGKTASFVLPI 67
Query: 473 LSRVDS---NKN-YPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEGK---NFPG 631
L + + KN + VLVP ++ ++ Q + N + S+ + G N
Sbjct: 68 LQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQM 127
Query: 632 VQKSQITFLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
+Q + L+ R L V S A + ++ VLDEA
Sbjct: 128 IQLQGVEILIATPGRLLDLVDSKAVYL-SDVEVLVLDEA 165
>UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=1;
Methylibium petroleiphilum PM1|Rep: Putative
ATP-dependent RNA helicase - Methylibium petroleiphilum
(strain PM1)
Length = 516
Score = 53.2 bits (122), Expect = 7e-06
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
+ FE+L L LL V +GF AP+ +QE A+P L + + SQ+G+GKTAAF+
Sbjct: 72 TASNFESLGLAAPLLHAVTQLGFTAPTSVQEQAIPAALKG--GDWMVSSQTGSGKTAAFL 129
Query: 464 LAMLSRV 484
L +L R+
Sbjct: 130 LPVLHRL 136
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L+L N+L + GF P+ IQ +P L D N++AQ+++G+GKTA+F + ++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDE-YNIVAQARTGSGKTASFAIPLI 66
Query: 476 SRVDSNKNYPQYCVLVP 526
V+ N N + +L P
Sbjct: 67 ELVNEN-NGIEAIILTP 82
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = +2
Query: 251 NKRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 430
N+R F+++ L LL+ ++ GF AP+ IQ +P LL ++++ +
Sbjct: 56 NRRTKGKKGNGKASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEG--RDVVGMA 113
Query: 431 QSGTGKTAAFVLAMLSRVDSN--KNYPQYCVLVPHMN*PYKLVKLLQ 565
++G+GKTAAFV+ M+ + S + + +L P+ + VK+++
Sbjct: 114 RTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVK 160
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 52.8 bits (121), Expect = 9e-06
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 311 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDS 490
++P L + GF ++IQ+ A+PT+L Q++IA+S +GTGKT A++L +L +++
Sbjct: 5 MQPFLQQAWEKAGFKELTEIQKQAIPTILEG--QDVIAESPTGTGKTLAYLLPLLHKINP 62
Query: 491 NKNYPQYCVLVP 526
PQ VL P
Sbjct: 63 EVKQPQVVVLAP 74
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 52.8 bits (121), Expect = 9e-06
Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ TFE +L +L K V +GF P+ IQE + +++ ++M+ +Q+GTGKT A++L
Sbjct: 1 MSTFEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSG--RDMMGIAQTGTGKTFAYLL 58
Query: 467 AMLSRVD-SNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFV 583
+L ++ N P+ VLVP ++V+ ++K ++
Sbjct: 59 PLLKLYKFTHTNTPKIVVLVPTRELVVQVVEEVEKLTKYM 98
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +2
Query: 257 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 430
+KD S+ + F LKP +L+ + GF PS++Q +P + +++ Q+
Sbjct: 28 KKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQA 85
Query: 431 QSGTGKTAAFVLAMLSRVDSNKNYPQYCVLVPH 529
+SG GKTA FVLA L +++ + N + +++ H
Sbjct: 86 KSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCH 118
>UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 586
Score = 52.8 bits (121), Expect = 9e-06
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
+E L P LL+ VY +GF P+ IQ A+P L D +++IA++ +G+GKT A+ + ++
Sbjct: 37 WENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLED-KRDIIAKASTGSGKTGAYSIPII 95
Query: 476 SRVDS---NKNYPQYCVLVPHMN*PYKLVKLLQK 568
+ S +++ + +LVP ++ K ++K
Sbjct: 96 QNILSEGLSEHNIKSVILVPTKELANQVTKFIEK 129
>UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=1;
Mycoplasma mobile|Rep: DEAD-box ATP-dependent RNA
helicase - Mycoplasma mobile
Length = 557
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/67 (35%), Positives = 45/67 (67%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ L + ++ + +GF AP++IQE + T A+ QN++ +Q+GTGKTAAF ++++
Sbjct: 3 FQELDIDDKIINNLKKIGFEAPTQIQELVIST--ANKNQNILGCAQTGTGKTAAFGVSII 60
Query: 476 SRVDSNK 496
+++ NK
Sbjct: 61 NKILKNK 67
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/80 (27%), Positives = 47/80 (58%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ TFE L + L+ G+ +P+++Q + ++ + ++++ SQ+GTGKT A++L
Sbjct: 1 MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQN--KDLLINSQTGTGKTLAYLL 58
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+ ++D++K Q +L P
Sbjct: 59 PIFEKIDTSKRETQALILAP 78
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 52.4 bits (120), Expect = 1e-05
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Frame = +2
Query: 245 YRNKRKDPNSPLYSVK------TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADP 406
+ + R +P P+ V+ F L L L V MG+ P+ IQ A+P +LA
Sbjct: 112 FEHPRSEPIKPVTPVEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAG- 170
Query: 407 PQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNF 580
+++ +Q+GTGKTAAF L +L ++ +++ + VL P ++ + QK+ +
Sbjct: 171 -RDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKY 227
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L +L+ + + ++AP++IQ+ A+P ++ ++++A +++GTGKTAAF L +L
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQG--KDILAGARTGTGKTAAFALPIL 60
Query: 476 SRVDS---NKNYPQYCVLV 523
++ S NK PQ VLV
Sbjct: 61 EKLSSKERNKKRPQTRVLV 79
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +2
Query: 251 NKRKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIA 424
N++++ + KT F+++ L NLLK + GFN P+ IQ ++P +L +++
Sbjct: 215 NEQEEETTSKKKKKTGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMIL--DGHDIVG 272
Query: 425 QSQSGTGKTAAFVLAMLSRV 484
+++G+GKT AFV+ M+ ++
Sbjct: 273 MARTGSGKTGAFVIPMIQKL 292
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/77 (31%), Positives = 46/77 (59%)
Frame = +2
Query: 254 KRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 433
++ N L S K+F+A L +L+G+ ++GF P+ IQ +P L ++++ +
Sbjct: 293 EKPSANGDLKSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG--KDVVGGAV 350
Query: 434 SGTGKTAAFVLAMLSRV 484
+G+GKT AF++ +L R+
Sbjct: 351 TGSGKTGAFIIPILERL 367
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF+ L L ++K + MGF + IQ +P L + +++I Q+Q+GTGKTAAF + +
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQN--KDVIGQAQTGTGKTAAFGIPI 60
Query: 473 LSRVDSNKNYPQYCVLVP 526
+ +V+ + Q V+ P
Sbjct: 61 VEKVNVKNSAVQALVVAP 78
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/78 (33%), Positives = 47/78 (60%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF+ +L +L+K + MGF + IQ +P L++ +++I Q+Q+GTGKTAAF + +
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSN--KDVIGQAQTGTGKTAAFGIPL 61
Query: 473 LSRVDSNKNYPQYCVLVP 526
+ +++ Q V+ P
Sbjct: 62 VEKINPESPNIQAIVIAP 79
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/63 (36%), Positives = 43/63 (68%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+A+ L P+LL+ + GF P+ IQ ++P +L ++++ +++G+GKTAAFV+ M+
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLIL--DRRDVVGMARTGSGKTAAFVIPMI 149
Query: 476 SRV 484
R+
Sbjct: 150 ERL 152
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/66 (34%), Positives = 44/66 (66%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+A+ L NLL+ + GF+ P+ IQ +P +L ++++ +++G+GKTAAFV+ M+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVL--ERRDVVGMARTGSGKTAAFVIPMI 145
Query: 476 SRVDSN 493
R+ ++
Sbjct: 146 ERLKAH 151
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +2
Query: 266 PNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 445
P + TF L L P + K + G+ +P+ IQ A+P LA ++++ +Q+GTG
Sbjct: 3 PRQDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAG--RDVLGIAQTGTG 60
Query: 446 KTAAFVL---AMLSRVDSNKNYPQYCVLVP 526
KTA+F L ML+R + P+ VL P
Sbjct: 61 KTASFTLPMITMLARGRARARMPRSLVLCP 90
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +LK + V GF PS +Q+ A+P +L +MIAQ+Q+GTGKTAAF L ++
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEG--HDMIAQAQTGTGKTAAFGLPIM 60
Query: 476 SRVDSNKNYPQYCVLVP 526
S + ++ + + V+VP
Sbjct: 61 SMMKADGSV-EGLVIVP 76
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 52.0 bits (119), Expect = 2e-05
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ LK L + GF PS++Q ALP + +++AQ++SG GKTA FV A+L
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLG--ADILAQAKSGMGKTAVFVFALL 95
Query: 476 SRVD----SNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFV 583
+V+ K Y Q VLV Y++ + +++ ++
Sbjct: 96 EQVEKVPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYL 135
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +2
Query: 266 PNSPLYS-VKTFE-ALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSG 439
P++P+ + V+TFE A H P LL+ + GF PS IQ A P LL +++I +Q+G
Sbjct: 313 PSAPIPNPVQTFEQAFHEYPELLEEIKKQGFAKPSPIQAQAWPVLLKG--EDLIGIAQTG 370
Query: 440 TGKTAAFVLAMLSRVD 487
TGKT AF+L ++
Sbjct: 371 TGKTLAFLLPAFIHIE 386
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 51.6 bits (118), Expect = 2e-05
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF---V 463
TFE L+L +LK + G+ +P+ IQE ++P LL ++++ +Q+GTGKTAAF +
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQG--KDLLGCAQTGTGKTAAFSIPI 59
Query: 464 LAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFV-LK*S*SMQLEG-KNFPGVQ 637
L L + D K + VL P ++ + + + + LK + G K
Sbjct: 60 LQKLYKTDHRKGI-KALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDAL 118
Query: 638 KSQITFLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
+S I L+ R L+ + S + L FFVLDEA
Sbjct: 119 RSGIQILVATPGR-LLDLISQGFISLSSLDFFVLDEA 154
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +2
Query: 311 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDS 490
+KP LL+ A F+ P+ IQ +A+ L D ++ + +GTGKT AFVL +LSR+D+
Sbjct: 1 MKPELLEKFNA-SFDTPTPIQ-SAVWQRLTDG-DSIFGLAPTGTGKTLAFVLPVLSRIDT 57
Query: 491 NKNYPQYCVLVPHMN*PYKLVKLLQKWQNFV 583
N Q +L P + ++ ++W N V
Sbjct: 58 NLKRTQVLILAPSQELAMQTTQVAREWGNAV 88
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/80 (38%), Positives = 46/80 (57%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
VK+F L LK ++ KGV+ SKIQ L LL +++I QS SGTGKT +++
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKG--RDIIYQSPSGTGKTTCYII 66
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+++ + N PQ +LVP
Sbjct: 67 GTSNQLCQSINSPQCLILVP 86
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/64 (37%), Positives = 41/64 (64%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +L+ +L+ + + GF +PS +Q A+P L +++I Q++SG GKTA FVL++L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEH--KDVICQAKSGKGKTAVFVLSLL 187
Query: 476 SRVD 487
+D
Sbjct: 188 HMID 191
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE L +K N+L + MGF IQE A+P LL ++++ Q+ +GTGKT A+ ++ML
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTG--RDVVGQAHTGTGKTGAYSISML 61
Query: 476 SRV 484
+
Sbjct: 62 QEI 64
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/81 (32%), Positives = 48/81 (59%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S ++F L+L P L++ + ++ P+ IQ A+P L ++I +Q+G+GKTAAF
Sbjct: 79 SFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEG--HDIIGLAQTGSGKTAAFA 136
Query: 464 LAMLSRVDSNKNYPQYCVLVP 526
+ +L+R+ ++ C+L P
Sbjct: 137 IPILNRLWHDQEPYYACILAP 157
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/63 (34%), Positives = 42/63 (66%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE+L+L PN+ + G+ P+ IQ +P +L+ +++A +++G+GKTAAF++ ML
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSG--VDVVAMARTGSGKTAAFLIPML 87
Query: 476 SRV 484
++
Sbjct: 88 EKL 90
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/77 (27%), Positives = 48/77 (62%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ + ++L+ + +G+ P+K+Q++ +P L ++++ +SQ+G+GKTA+F + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALER--KDLVVKSQTGSGKTASFGIPLC 61
Query: 476 SRVDSNKNYPQYCVLVP 526
+ ++N PQ +L P
Sbjct: 62 ELANWDENKPQALILTP 78
>UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2;
Saccharomycetaceae|Rep: ATP-dependent RNA helicase DBP7
- Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 798
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 NSPLYSVKTFEALHLKPNLLKGVY-AMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 445
N+PL TF+ L L L + ++ F AP+K+Q + +P+L+A +++ ++Q+G+G
Sbjct: 154 NAPLKDATTFDGLGLNDKLATHLTESLRFKAPTKVQRSVIPSLIATQ-RDLFVKAQTGSG 212
Query: 446 KTAAFVLAMLSRVDSNKNY 502
KT +F+L + ++ S + Y
Sbjct: 213 KTLSFLLPIFHKLMSEEKY 231
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 51.2 bits (117), Expect = 3e-05
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+FE L + LL + +G+ P+ IQ A+P +LA ++ A +Q+GTGKTAAF L M
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAK--SDVFATAQTGTGKTAAFGLGM 59
Query: 473 LSRV----DSNKNYPQYCVLVPHMN*PYKLVKLLQKW-QNFVLK*S*SMQLEGKNFPGVQ 637
L R+ D + + V+ P ++ + LQ + +N + + ++ + GK+ Q
Sbjct: 60 LQRLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGI--NIAVLVGGKDLESQQ 117
Query: 638 ---KSQITFLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
K + ++ R L V L V++ FVLDEA
Sbjct: 118 KILKEGVDIVIATPGRVLEHVDKGLSLSHVEI--FVLDEA 155
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L+L ++K + MGF S+IQ LP L ++I Q+Q+GTGKTAAF++AM+
Sbjct: 73 FHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLG--YDIIGQAQTGTGKTAAFLIAMI 130
Query: 476 S 478
S
Sbjct: 131 S 131
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F L L +LK + G+ PS IQ A+P +L Q+++A +Q+GTGKTA F L +
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEG--QDVMAAAQTGTGKTAGFTLPL 63
Query: 473 LSRVDSNKN 499
L + +N
Sbjct: 64 LEILSKGEN 72
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L L ++LK + +G+ PS IQE A+P LA ++++ +Q+GTGKT AF +
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAG--RDVLGCAQTGTGKTCAFAAPI 59
Query: 473 LSRV 484
L R+
Sbjct: 60 LQRL 63
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/64 (37%), Positives = 41/64 (64%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F++ P + G+ +G++ P+ IQE +P L +++I +Q+GTGKTAAFVL +
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDG--RDVIGIAQTGTGKTAAFVLPI 59
Query: 473 LSRV 484
L R+
Sbjct: 60 LQRL 63
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/64 (35%), Positives = 42/64 (65%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+FE+ + P ++ GV A G+ P+ IQ A+P ++A ++I +Q+GTGKTAA+ L +
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAG--HDVIGLAQTGTGKTAAYALPI 59
Query: 473 LSRV 484
+ ++
Sbjct: 60 IQKM 63
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/80 (36%), Positives = 49/80 (61%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S KTFE L L L+ +GF APS IQ +P +L +++IA +++G+GKTA+F
Sbjct: 2 SDKTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKG--RDIIASAKTGSGKTASFA 59
Query: 464 LAMLSRVDSNKNYPQYCVLV 523
+ +L+++ S Y + V++
Sbjct: 60 IPILNQL-SEDPYGVFAVIL 78
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/70 (31%), Positives = 48/70 (68%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
+ ++F++++L+P LL+ + G+ P+ +Q+ +P ++ ++++A +Q+G+GKTAAF+
Sbjct: 259 AAESFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNG--RDIMACAQTGSGKTAAFL 316
Query: 464 LAMLSRVDSN 493
L ML + N
Sbjct: 317 LPMLHYILDN 326
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/97 (26%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE+++L + K + GFN P+ IQ A+P +L ++++A S++G+GKTAAF++ ++
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEG--RDVVACSRTGSGKTAAFIIPLI 358
Query: 476 SRVDSNKNY--PQYCVLVPHMN*PYKLVKLLQKWQNF 580
+++ ++ + ++VP ++ +L+ + F
Sbjct: 359 NKLQNHSRIVGARALIVVPTRELALQIASVLKTFIKF 395
>UniRef50_A2E773 Cluster: Helicase conserved C-terminal domain
containing protein; n=3; Trichomonas vaginalis G3|Rep:
Helicase conserved C-terminal domain containing protein
- Trichomonas vaginalis G3
Length = 418
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +2
Query: 278 LYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAA 457
L+ T+ LH K + F PS IQ +++ + +++ Q+Q+G+GKT A
Sbjct: 41 LFDYDTYSDLHQK------LIDNNFEKPSSIQASSIQIANGEDHPSILGQAQNGSGKTLA 94
Query: 458 FVLAMLSRVDSNKNYPQYCVLVPHM 532
FV+ L RVD N + Q +LVP+M
Sbjct: 95 FVVNSLLRVDRNSSKVQVVILVPNM 119
>UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Homo
sapiens|Rep: HLA-B associated transcript 1 - Homo
sapiens (Human)
Length = 197
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +2
Query: 257 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 430
+KD S+ + F LKP LL+ + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
Query: 431 QSGTGKTAAFVLAMLSRVDSNKNYPQYC 514
+SG GKTA FVLA L +++ +C
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVCFC 117
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 51.2 bits (117), Expect = 3e-05
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +2
Query: 257 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 430
+KD S+ + F LKP LL+ + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
Query: 431 QSGTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQL 610
+SG GKTA FVLA L +++ V+ +++ K +++ ++ ++
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 611 EG---KNFPGVQKSQITFLLVLQERCLIGVSSLACLIWVKLKFFVLDE 745
G K V K ++V ++ ++ L +K F+LDE
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDE 197
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 51.2 bits (117), Expect = 3e-05
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F LKP LL+ + GF PS++Q +P + ++I Q++SG GKTA FVL+ L
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTL 105
Query: 476 SRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEGKNF---PGVQKSQ 646
+++ + VL Y++ ++ ++ S+ G N + K++
Sbjct: 106 QQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNE 165
Query: 647 ITFLLVLQERCLIGVSSLACLIWVKLKFFVLDE 745
++V ++ ++ L ++ F+LDE
Sbjct: 166 CPHIVVGTPGRVLALAREKDLSLKNVRHFILDE 198
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 430
+KD S+ + F LKP LL+ + GF PS++Q +P + +++ Q+
Sbjct: 31 KKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 88
Query: 431 QSGTGKTAAFVLAMLSRVD 487
+SG GKTA FVLA L +++
Sbjct: 89 KSGMGKTAVFVLATLQQIE 107
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL-A 469
TFE L L P LL + ++ P+ IQ A+P +L ++++A + +GTGKTAAFVL A
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLS--KDVLAGAATGTGKTAAFVLPA 59
Query: 470 MLSRVDSNK--NYPQYCVLVPHMN*PYKLVKLLQK 568
+ +D + P+ +L P +++ K++++
Sbjct: 60 LQFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQ 94
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F++ L +LKG+ A+GF + +Q+ +P L Q+++ +++G+GKTAAFV+ ML
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQ--QDLMVCARTGSGKTAAFVVPML 59
Query: 476 SRVDSNK---NYPQYCVLVPHMN*PYKLVKLLQKWQNF 580
+ ++K + + +LVP +L+K Q F
Sbjct: 60 QHLLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKF 97
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE L L LL + G+ P++IQ A+P +LA ++I +Q+GTGKTAA+ L +L
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAG--HDIIGVAQTGTGKTAAYALPIL 64
Query: 476 SRV 484
++
Sbjct: 65 MKI 67
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +L L L + + ++G+ + IQ +P LL ++++ +Q+GTGKTAAF L +L
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEG--RDVVGLAQTGTGKTAAFALPIL 68
Query: 476 SRVDSNKNYPQYCVLVP 526
+ +D PQ VL P
Sbjct: 69 ANIDVKVRSPQALVLCP 85
>UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL'
isoform 4; n=11; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 4 - Nicotiana
tabacum (Common tobacco)
Length = 425
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/73 (32%), Positives = 48/73 (65%)
Frame = +2
Query: 308 HLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVD 487
H+ ++++ V +G+ P+++Q ALP L + ++ + +Q+G+GKT A++L MLS +D
Sbjct: 73 HVPEHVIRRVEEVGYVIPTEVQLLALPFLYSG--RDCVLHAQTGSGKTLAYLLQMLSVID 130
Query: 488 SNKNYPQYCVLVP 526
S ++ Q ++VP
Sbjct: 131 SQRSAVQALIVVP 143
>UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL'
isoform 5; n=2; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 5 - Nicotiana
tabacum (Common tobacco)
Length = 390
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/73 (32%), Positives = 48/73 (65%)
Frame = +2
Query: 308 HLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVD 487
H+ ++++ V +G+ P+++Q ALP L + ++ + +Q+G+GKT A++L MLS +D
Sbjct: 73 HVPEHVIRRVEEVGYVIPTEVQLLALPFLYSG--RDCVLHAQTGSGKTLAYLLQMLSVID 130
Query: 488 SNKNYPQYCVLVP 526
S ++ Q ++VP
Sbjct: 131 SQRSAVQALIVVP 143
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+FE ++L +LK G++ P+ IQ+ +P L +++ A + +GTGKTAAFVL +
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTG--KDICACAATGTGKTAAFVLPI 206
Query: 473 LSRV---DSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFV 583
L R+ + + VLVP ++ ++ +K F+
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFI 246
>UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Yarrowia lipolytica|Rep: ATP-dependent RNA helicase DBP7
- Yarrowia lipolytica (Candida lipolytica)
Length = 799
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +2
Query: 251 NKRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 430
N + N+ L TF L L+ + M P+KIQ +P L+ +++ Q+
Sbjct: 220 NNAESSNAALKDSTTFSGLGCSQRLVDALVGMQLAKPTKIQRATIPRLI-QRERDLFVQA 278
Query: 431 QSGTGKTAAFVLAMLSRVDS 490
Q+G+GKT AFVL +L R+ S
Sbjct: 279 QTGSGKTLAFVLPVLERIMS 298
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F L L LL+ V +G+ P+ +Q A+P++L +++IA +Q+GTGKTA+FVL M
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLM--MRDLIAVAQTGTGKTASFVLPM 59
Query: 473 L 475
+
Sbjct: 60 I 60
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 50.4 bits (115), Expect = 5e-05
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L L N+L+ + GF P+ IQE +P +L +++A++Q+G+GK+A+F+L +L
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVL--ERHDIMAKAQTGSGKSASFILPIL 60
Query: 476 SRV--DS--NKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEGKNFPGVQKS 643
+ DS K + VL P ++V+ + F+ K + + G G Q
Sbjct: 61 ELLSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFMSKKPKVVGVIGGEGIGEQLF 120
Query: 644 QI---TFLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
I +LV + + S +I + FFVLDEA
Sbjct: 121 NIQKGCDILVATSGRFLDILSKKQMILSHVDFFVLDEA 158
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/86 (32%), Positives = 51/86 (59%)
Frame = +2
Query: 269 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 448
+ P S +F L L ++L + +G+ + IQ+ ALP +LA+ +++IA++++G+GK
Sbjct: 29 DEPYVSDSSFAKLALPKSVLSNLDQLGYKEMTAIQQQALPEVLAE--KDLIAKAKTGSGK 86
Query: 449 TAAFVLAMLSRVDSNKNYPQYCVLVP 526
TAAF + +L ++ Q VL P
Sbjct: 87 TAAFGIGLLLKLRPRNFATQALVLCP 112
Score = 33.9 bits (74), Expect = 4.4
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITD--HILIGTPGKMFDWGV 693
PT ELA K+A+F +K+ G+ + P+ + H+++ TPG++ D +
Sbjct: 112 PTRELATHVANELRKLARFTENLKILTLCGGQPIGPQIGSLEHGAHVVVRTPGRIKD-HL 170
Query: 694 KFGMFDMGKIKVFC 735
+ G +G K C
Sbjct: 171 RKGTLSLGSAKTVC 184
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/93 (30%), Positives = 49/93 (52%)
Frame = +2
Query: 215 TARSS*I*TRYRNKRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTL 394
T+ SS R K++ P F L L ++K + +G+ P+ IQ A+P +
Sbjct: 78 TSSSSKPKNRDEKKKQRVEQPKSDASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAV 137
Query: 395 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSN 493
L ++++ +Q+GTGKTAAF L ++ ++ N
Sbjct: 138 LNS--KDLVGLAQTGTGKTAAFALPLIQQLLMN 168
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 50.4 bits (115), Expect = 5e-05
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+ LKP +L+ ++ G P+ IQ ALP LA +++I Q+++GTGKT AF L +
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALP--LALEGKDLIGQARTGTGKTLAFALPIA 60
Query: 476 SRVDSNK---NYPQYCVLVP 526
R+ ++ P+ VL P
Sbjct: 61 ERLAPSQERGRKPRALVLTP 80
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L L LL+ + + P+ IQ ++P +L +++ +Q+GTGKTAAFVL +L
Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEG--HDLVGIAQTGTGKTAAFVLPIL 116
Query: 476 SRVDSNKNYP 505
R+ +N+ P
Sbjct: 117 HRIAANRARP 126
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/60 (41%), Positives = 43/60 (71%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE + L P LL+ V +G++ P+ IQE A+P LA ++++A++++G+GKTAA+ + ML
Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIP--LALEGKDLLARARTGSGKTAAYAIPML 66
>UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase
CG1666-PA isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to Helicase CG1666-PA isoform 1 - Apis mellifera
Length = 547
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/69 (33%), Positives = 45/69 (65%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
K+F L L +LK V +G+ P+ IQE +P ++ ++++ ++++G+GKTAAF +
Sbjct: 12 KSFYELELDDRILKAVAKLGWLEPTLIQEKTIPLMIEG--KDILIRARTGSGKTAAFTIP 69
Query: 470 MLSRVDSNK 496
++ ++ SNK
Sbjct: 70 LIQKILSNK 78
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L+L + + MGF S IQ A+P +L +++I +Q+GTGKTAAF + +
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKG--KDIIGHAQTGTGKTAAFAIPTI 68
Query: 476 SRVDSNKNYPQYCVLVP 526
++ + Q +L P
Sbjct: 69 ELLEVESKHLQALILCP 85
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI---TDHILIGTPGKMFDWGV 693
PT EL IQ E K+ K+ ++ G+E+ R + I+I TPG+M D +
Sbjct: 85 PTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQIVIATPGRMMD-HM 143
Query: 694 KFGMFDMGKIKV 729
+ G + +IK+
Sbjct: 144 RRGSIHLDEIKI 155
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF---V 463
TF L L +L + +GFN P+ IQ+ A+P LL ++++A +Q+GTGKTAA+ +
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQG--RDVLAAAQTGTGKTAAYGLPL 61
Query: 464 LAMLSRVDSNKNYPQY 511
+ MLSR + P++
Sbjct: 62 IQMLSRQSREETAPKH 77
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/81 (29%), Positives = 46/81 (56%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S K+F L + + + +G+ P+++Q +P L ++++ +SQ+G+GKTA+F
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQK--KDLVVKSQTGSGKTASFG 59
Query: 464 LAMLSRVDSNKNYPQYCVLVP 526
+ + V+ +N PQ VL P
Sbjct: 60 IPLCEMVEWEENKPQALVLTP 80
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L L ++LK + MG+N + IQE P + A ++ A +++G+GKTAA + ++
Sbjct: 3 FSDLELSADILKALDKMGYNEMTPIQEATYPIIFAG--HDLCALAETGSGKTAACAIPLI 60
Query: 476 SRVDSNKNYPQYCVLVP 526
+VD + + Q V+VP
Sbjct: 61 QKVDPSLDAIQGLVIVP 77
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 50.0 bits (114), Expect = 6e-05
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L L P L+ V G+ + IQ A+P LA Q+++ +Q+GTGKTAAF L ++
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAG--QDVLGIAQTGTGKTAAFTLPLI 61
Query: 476 SRVDSNK---NYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEGKNFPGVQK-- 640
++ + + P+ V+ P ++ +K+ K S ++ + G +F +K
Sbjct: 62 DKLMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGT-KLSWALLIGGVSFGDQEKKL 120
Query: 641 SQITFLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
+ +L+ L+ L+ ++F V+DEA
Sbjct: 121 DRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEA 156
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 50.0 bits (114), Expect = 6e-05
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ F+ L L ++K V G+ AP+ IQ +P +L ++++ +Q+GTGKTA+FVL
Sbjct: 5 LNNFDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQH--KDVLGIAQTGTGKTASFVL 62
Query: 467 AMLSRVDSNK---NYPQYCVLVP 526
ML+ ++ + P+ +L P
Sbjct: 63 PMLTLLEKGRAKARMPRTLILEP 85
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +L L L+ + A G+ P+ IQ A+P LA +++A +Q+GTGKTAAF+L L
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAG--HDLLAAAQTGTGKTAAFMLPSL 88
Query: 476 SRV 484
R+
Sbjct: 89 ERL 91
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/77 (31%), Positives = 46/77 (59%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE++ L+ +L++ + P+ IQ+ A+P L + +++I S +GTGKT A++L +
Sbjct: 5 FESMELEKSLVEALKKESITVPTDIQQKAIPEALKN--RDVILHSSTGTGKTLAYLLPLF 62
Query: 476 SRVDSNKNYPQYCVLVP 526
++ + K Q +LVP
Sbjct: 63 MKLSAEKKEMQALILVP 79
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/75 (34%), Positives = 49/75 (65%)
Frame = +2
Query: 269 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 448
N+P S+ TFE L +L V + P+ +Q+ ++P + AD ++++A +Q+G+GK
Sbjct: 307 NAPK-SIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPIINAD--RDLMACAQTGSGK 363
Query: 449 TAAFVLAMLSRVDSN 493
TAAF+L +L+++ +N
Sbjct: 364 TAAFLLPVLTKLITN 378
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F+ ++L LLK + AMGF P+ IQ+ +P L +++ A + +GTGKTAAF L +
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLG--KDICACAATGTGKTAAFALPV 276
Query: 473 LSRV 484
L R+
Sbjct: 277 LERL 280
Score = 33.5 bits (73), Expect = 5.8
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS---KITDHILIGTPGKMFDWGV 693
PT EL IQ V ++A+FC I AV G ++ + ILI TPG++ D
Sbjct: 297 PTRELGIQVHSVTRQLAQFC-NITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLH 355
Query: 694 KFGMFDMGKIKV 729
F + I+V
Sbjct: 356 NCPSFHLSSIEV 367
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 49.6 bits (113), Expect = 8e-05
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F +L L ++ +G+ GF PS IQ A+P L ++I +S+SGTGKT F
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIP--LGRCGFDLIVKSKSGTGKTLVFSTIA 82
Query: 473 LSRVDSNKNYPQYCVLVP 526
L V++ K++ Q +LVP
Sbjct: 83 LETVNTAKDHLQVLILVP 100
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF+ ++L LLK + AM F P+ IQ+ +P L +++ A + +GTGKTAAF+L +
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLG--KDICACAATGTGKTAAFMLPV 239
Query: 473 LSRV 484
L R+
Sbjct: 240 LERL 243
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 49.6 bits (113), Expect = 8e-05
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S + F ++ LK +LL+ + GF P+ IQ ++P +A +++ Q+Q+GTGKTA+F
Sbjct: 2 SFENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAG--LDLMGQAQTGTGKTASFG 59
Query: 464 LAMLSRVDSNKNYPQYCVLVP 526
+ +L+RV + Q VL P
Sbjct: 60 IPILNRVIKGEGL-QALVLCP 79
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 49.6 bits (113), Expect = 8e-05
Identities = 21/68 (30%), Positives = 45/68 (66%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
++ F+ L L +L+ + +G+ AP+ +Q ++P +L ++++A +Q+GTGKTAAF+
Sbjct: 44 NLPAFDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEG--RDLLAAAQTGTGKTAAFL 101
Query: 464 LAMLSRVD 487
L ++ ++
Sbjct: 102 LPTMNNLE 109
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/70 (31%), Positives = 45/70 (64%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TFEAL L P +L+ + +G +P+ IQ+ ++P ++ ++++ +Q+GTGKT F+L +
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDG--RDLLGIAQTGTGKTGGFLLPV 59
Query: 473 LSRVDSNKNY 502
L ++ + +
Sbjct: 60 LHKIAEGRRH 69
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/66 (33%), Positives = 44/66 (66%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F++ +L+ LL + GF+ P+ IQ A+P +L +++A +++G+GKTAAF++ ML
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQG--NDVVAMARTGSGKTAAFLIPML 81
Query: 476 SRVDSN 493
+ + ++
Sbjct: 82 NTLKAH 87
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +2
Query: 329 KGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQ 508
+ V + GF PS IQ+ + ++ ++ IAQ+QSGTGKTA F +A L +D++ + Q
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKG--KDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQ 104
Query: 509 YCVLVP 526
+L P
Sbjct: 105 ALILAP 110
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/80 (27%), Positives = 50/80 (62%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+K FE +L+ L++ + G++ P+++Q A+P LA +++ +S++G+GKTAA+++
Sbjct: 1 MKGFEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAG--SDLVVRSKTGSGKTAAYLI 58
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+++ K + +L+P
Sbjct: 59 PIINNTAKEKGI-RALILLP 77
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ +F L L P ++K + +G+ P+ IQ+ +P +LA ++ Q+ +GTGKTAAF +
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAG--NDVAGQAYTGTGKTAAFGI 60
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+ Q VL P
Sbjct: 61 PAIELCQPANRNVQTIVLCP 80
>UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 594
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/64 (35%), Positives = 41/64 (64%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TFEA HL LL+ + +GF P+ IQ A+P L +++IA++ +G+GKT A+++ +
Sbjct: 18 TFEAFHLDSRLLQAIKNIGFQYPTLIQSHAIP-LALQQKRDIIAKAATGSGKTLAYLIPV 76
Query: 473 LSRV 484
+ +
Sbjct: 77 IETI 80
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/72 (36%), Positives = 44/72 (61%)
Frame = +2
Query: 281 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF 460
+S+ F L L LLK + G+ P+ IQ A+P +++ ++++ +Q+GTGKTAAF
Sbjct: 62 HSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSG--RDLLGIAQTGTGKTAAF 119
Query: 461 VLAMLSRVDSNK 496
L +L R+ +K
Sbjct: 120 ALPILHRLAEDK 131
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/63 (33%), Positives = 42/63 (66%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE++ + P + + V G+ P+ IQ A+P L ++++A +++G+GKTAAF++ +L
Sbjct: 468 FESMEILPEVFRAVKRKGYRVPTPIQRKAIPPALEG--RDVVAMARTGSGKTAAFLIPVL 525
Query: 476 SRV 484
S++
Sbjct: 526 SKL 528
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F L L +LK V +G+ P+ IQ TA+P LL ++++ ++++G+GKTA + L ++
Sbjct: 11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEG--KDVVVRARTGSGKTATYALPLI 68
Query: 476 -----SRVDSNKNYPQYCVLVP 526
S++++++ Y VL P
Sbjct: 69 QKILNSKLNASEQYVSAVVLAP 90
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/66 (31%), Positives = 44/66 (66%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V + + L P +L G+ A+G+ P++IQE LP L ++++A++++G+GKT A+++
Sbjct: 10 VVQWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKG--KDILAKARTGSGKTGAYLI 67
Query: 467 AMLSRV 484
++ R+
Sbjct: 68 PIVQRI 73
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KT++ L L LLK V M + P+ IQ A+P L ++++A S +G+GKTAAF++
Sbjct: 190 KTWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQG--KDLLASSLTGSGKTAAFLIP 247
Query: 470 MLSRVDSN--KNYPQYCVLVPHMN*PYKLVKLLQKWQNF 580
+L + + NY + ++ P +++ ++ K +
Sbjct: 248 ILQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKY 286
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/107 (25%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Frame = +2
Query: 269 NSPLYSVKT-FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 445
+S ++++ T F L L L+K + G+ P+ +Q +P ++ ++++A S +G+G
Sbjct: 108 DSKIFAIDTEFHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNG--KDVLASSCTGSG 165
Query: 446 KTAAFVLAMLSRVDSNKN--YPQYCVLVPHMN*PYKLVKLLQKWQNF 580
KTAAF+L ++ R + KN Y + +++P + ++ +K +
Sbjct: 166 KTAAFLLPIMQRFGNLKNLQYSKALIILPTRELALQCFEMFEKLNKY 212
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/64 (32%), Positives = 44/64 (68%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F++++L +LKG+ +GF P++IQ+ +P L ++++ + +G+GKTAAF++ +
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLG--KDIVGAAVTGSGKTAAFIVPI 317
Query: 473 LSRV 484
L R+
Sbjct: 318 LERL 321
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF + L +L G+ GF+ PS IQ ++P L ++I +++SGTGKTA F +
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIP--LGRCGFDLIVRAKSGTGKTAVFGIIA 82
Query: 473 LSRVDSNKNYPQYCVLVP 526
L +D + Q +L P
Sbjct: 83 LEMIDIKISSVQVIILAP 100
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = +2
Query: 239 TRYRNKRKDPNSPLYSV-----KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLAD 403
TR K+KD + + V TF+ L +K LL + G P+KIQ+ +P LL+
Sbjct: 8 TRATIKKKDEETKIKEVIPSDLNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSF 67
Query: 404 PPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
N++ +++G+GKTAAF L ++ + ++ VL P
Sbjct: 68 --HNVLGGAETGSGKTAAFALPIIHHLSTDPYTGFALVLTP 106
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +2
Query: 305 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 484
+ + NL K + M F P++IQE A+P +L +++I +S++G+GKTAA++L +L+ V
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTG--KDVIIRSKTGSGKTAAYLLPVLNSV 58
Query: 485 DSNKNYPQYCVLV 523
+ K +++
Sbjct: 59 EKLKGKSVKAIII 71
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/67 (35%), Positives = 46/67 (68%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F + L LLK V +G++ P+ IQE A+P LA ++++A++++G+GKTAA+ + ++
Sbjct: 8 FHEMGLDDRLLKAVADLGWSQPTLIQEKAIP--LALEGKDLLARARTGSGKTAAYAVPVI 65
Query: 476 SRVDSNK 496
R+ ++K
Sbjct: 66 QRILASK 72
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/81 (30%), Positives = 45/81 (55%)
Frame = +2
Query: 326 LKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYP 505
L+ + G P++IQ+ +P L QN+I SQ+GTGKT A++L ML++ +
Sbjct: 14 LEALTNQGITEPTEIQQQVIPEALDG--QNLIVHSQTGTGKTLAYLLPMLTKTEELPEQT 71
Query: 506 QYCVLVPHMN*PYKLVKLLQK 568
Q +L P ++V++ ++
Sbjct: 72 QALILAPTQELAMQIVEVAKQ 92
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F AL + LLKGV A G P IQ A+P+ L Q+++ +Q+G+GKTAAF L +L
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEG--QDILGIAQTGSGKTAAFSLPIL 146
Query: 476 SRV 484
++
Sbjct: 147 QKI 149
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 48.8 bits (111), Expect = 1e-04
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S + F L L P LL+ + G+ P+ IQ ++P LL ++++ +Q+GTGKTA+F
Sbjct: 5 SAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEG--RDLLGLAQTGTGKTASFA 62
Query: 464 LAMLSRVDSN-----KNYPQYCVLVP 526
L +L R+ + KN + VL P
Sbjct: 63 LPLLHRLAATPRPAPKNGARVLVLAP 88
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/89 (32%), Positives = 49/89 (55%)
Frame = +2
Query: 260 KDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSG 439
++P+ PL V E L ++ + V+A G+ +Q A+P L +++I QSQ+G
Sbjct: 34 REPDPPLDEVTVDE---LSGHMEQAVHAAGWTELMDVQRKAIPYTLDG--RDLIVQSQTG 88
Query: 440 TGKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
+GKT AF+L + V+ +K Q +L P
Sbjct: 89 SGKTGAFLLPLFDLVNPDKEEQQVLILTP 117
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
S +F L L P L + +G+ P+ IQ A+P +L +++A++Q+GTGKTA+F
Sbjct: 2 SASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRG--DDLLAEAQTGTGKTASFA 59
Query: 464 LAMLSRVDSN 493
L ++ ++ N
Sbjct: 60 LPIIEKLSKN 69
>UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 940
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/63 (33%), Positives = 43/63 (68%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
+ + +L P +LKG+ ++GF+ P++IQ + +P ++ ++I +Q+G+GKT AF + M+
Sbjct: 296 WNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSS-GYDVIGAAQTGSGKTLAFGIPMV 354
Query: 476 SRV 484
R+
Sbjct: 355 QRI 357
>UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyces
cerevisiae ATP-dependent RNA helicase MAK5; n=1;
Yarrowia lipolytica|Rep: Similarities with sp|P38112
Saccharomyces cerevisiae ATP-dependent RNA helicase MAK5
- Yarrowia lipolytica (Candida lipolytica)
Length = 998
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/63 (34%), Positives = 43/63 (68%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
T L +L++G+YA+G+ +P++IQ+ ++P +LA ++I ++ +G+GKT A+ L +
Sbjct: 358 TLNGEQLNYSLIQGLYALGYKSPTEIQKKSIPPILAG--DDVIGKASTGSGKTLAYGLPI 415
Query: 473 LSR 481
L R
Sbjct: 416 LHR 418
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +2
Query: 248 RNKRKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 421
R KR+ + K+ FE++ L + +GV G+ P+ IQ A+P +LA ++
Sbjct: 33 RPKREGEGASKRKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAG--HDIA 90
Query: 422 AQSQSGTGKTAAFVLAMLSRV 484
A +++G+GKTAAF++ M+ R+
Sbjct: 91 AMARTGSGKTAAFLVPMIQRL 111
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V +F L L+P LL+G+ + +P+ +Q A+P LA ++++A+S +GTGKT A++L
Sbjct: 46 VASFAELQLEPRLLRGIRDQKWGSPTAVQSKAIP--LALQGRDILARSGTGTGKTGAYLL 103
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
+L K +LVP
Sbjct: 104 PILHNTLLRKGKTS-LILVP 122
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/66 (31%), Positives = 44/66 (66%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F+++ L L GV G+ P+ IQ A+P +L ++IA +++G+GKTAA+++ ++
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRG--NDIIAMARTGSGKTAAYLVPII 72
Query: 476 SRVDSN 493
+R++++
Sbjct: 73 NRLETH 78
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/63 (34%), Positives = 41/63 (65%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F+ + LK +++ + GF PS++Q +P L Q+++ Q++SG GKTA FVL++
Sbjct: 34 SFQEMGLKKEIMQSITDCGFEHPSEVQSQVIPKALLR--QDILCQAKSGMGKTAVFVLSI 91
Query: 473 LSR 481
L++
Sbjct: 92 LNQ 94
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF L L +L V G+ P+ IQ +P++LA ++++A +Q+GTGKTA F L +
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAG--KDVMASAQTGTGKTAGFTLPL 63
Query: 473 LSRVDSNKN 499
L R+ + N
Sbjct: 64 LYRLQAYAN 72
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/86 (34%), Positives = 51/86 (59%)
Frame = +2
Query: 269 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 448
NSP+ + TF+ ++L P LL + M + P+ +Q A+P L ++IA +Q+G+GK
Sbjct: 27 NSPVRA-HTFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASL--DGSDIIAIAQTGSGK 83
Query: 449 TAAFVLAMLSRVDSNKNYPQYCVLVP 526
T AF L++L+ + K + +LVP
Sbjct: 84 TLAFALSLLTTL-QKKPEARGLILVP 108
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +2
Query: 311 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 484
LK NLL+G+YA G PS IQ+ + ++I Q+QSGTGKTA F +L ++
Sbjct: 3 LKENLLRGIYAYGIEKPSAIQQKGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Frame = +2
Query: 269 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 448
+ PL ++ F +L L P LL G+ GF + IQ LP LA +++ Q+Q+GTGK
Sbjct: 3 DKPLTNLN-FSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAG--RDIAGQAQTGTGK 59
Query: 449 TAAFVLAMLSR-------VDSNKNYPQYCVLVP 526
T AF++ +++R V+ N P+ +L P
Sbjct: 60 TLAFLVVVVNRLLSRPGLVNRNPEDPRALILAP 92
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
VKTF L ++ L+K +G+ PSKIQ ALP L +++I +Q+G+GKT AF +
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEG--KDVIGLAQTGSGKTGAFAI 65
Query: 467 AML 475
+L
Sbjct: 66 PIL 68
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/63 (34%), Positives = 40/63 (63%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF +L L P ++ + A G+ P+ +Q+ A+P +A ++++ S +G+GKTAAF+L
Sbjct: 44 TFASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAG--RDLLVSSPTGSGKTAAFMLPA 101
Query: 473 LSR 481
+ R
Sbjct: 102 IER 104
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TF+ L +LK + G+ P+ IQ A+P +L+ ++++ +Q+GTGKTA+F L +
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSG--RDVMGAAQTGTGKTASFSLPI 69
Query: 473 LSRV 484
+ R+
Sbjct: 70 IQRL 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,814,182
Number of Sequences: 1657284
Number of extensions: 14768359
Number of successful extensions: 36636
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 34846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36317
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -