Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0707
(758 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 57 1e-10
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 26 0.28
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 25 0.66
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 24 1.5
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 4.6
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 4.6
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 22 6.1
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 22 6.1
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 22 6.1
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 8.1
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 57.2 bits (132), Expect = 1e-10
Identities = 27/73 (36%), Positives = 51/73 (69%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ +FE L+P+LL+ V G+ P+ IQ+ A+P +L+ +++++ +Q+G+GKTAAF+L
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSG--RDLMSCAQTGSGKTAAFML 214
Query: 467 AMLSRVDSNKNYP 505
++ + S+KN P
Sbjct: 215 PIIHNLLSDKNPP 227
Score = 31.1 bits (67), Expect = 0.010
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMA-KFCPEIKLKYAVRGEELPRGSKITD-HILIGTPGKMFDWGVK 696
PT ELAIQ + K A ++ + Y RG + HIL+ TPG++ D+ V
Sbjct: 243 PTRELAIQIADQGKKFAYNSTVKVAVIYGGTSTNHQRGRILGGCHILVATPGRLKDF-VN 301
Query: 697 FGMFDMGKIKVF 732
G +K F
Sbjct: 302 RGNVSFNSLKYF 313
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 26.2 bits (55), Expect = 0.28
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 407 PQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQYCV 517
P NM + + G+ A + S V+SN+N PQ C+
Sbjct: 716 PDNM--KLEKVPGECCAICVNATSLVESNRNVPQKCI 750
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 25.0 bits (52), Expect = 0.66
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 121 SPATLFEISNSSAFCPHWL 65
SPA+L IS S F P WL
Sbjct: 197 SPASLPSISPSGGFLPKWL 215
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 51 VINMASQWGQKAEELEISNKVAGLGLDKKHNQETDSDDVP 170
V+N++ G A LE + ++ D +Q+ D D+P
Sbjct: 213 VLNLSKSGGGSAGSLEDDDNISDPEDDDDKDQDMDEGDLP 252
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 88 KSWRFQIKLQGWAWIKNIIKKQILMMYLIPLMQPILL 198
+S++ K WA K ++ + IL ++ PL+ + L
Sbjct: 383 ESFKSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRL 419
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 88 KSWRFQIKLQGWAWIKNIIKKQILMMYLIPLMQPILL 198
+S++ K WA K ++ + IL ++ PL+ + L
Sbjct: 383 ESFKSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRL 419
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 317 PNLLKGVYAMGFNAPSKIQ 373
P+++KG +GF+ P IQ
Sbjct: 321 PHIVKGNQWLGFDDPKSIQ 339
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 317 PNLLKGVYAMGFNAPSKIQ 373
P+++KG +GF+ P IQ
Sbjct: 322 PHIVKGNQWLGFDDPKSIQ 340
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 317 PNLLKGVYAMGFNAPSKIQ 373
P+++KG +GF+ P IQ
Sbjct: 322 PHIVKGNQWLGFDDPKSIQ 340
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 610 RGEELPRGSKITDHI 654
RGE L RG+KI H+
Sbjct: 169 RGEPLGRGTKIVLHM 183
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,611
Number of Sequences: 336
Number of extensions: 3915
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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