Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0707
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 146 2e-35
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 70 2e-12
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 70 2e-12
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 56 3e-08
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 52 7e-07
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 40 0.003
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 40 0.003
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 39 0.004
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 39 0.005
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 38 0.007
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 36 0.027
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 31 1.3
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 29 3.1
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_24445| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_6602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 146 bits (354), Expect = 2e-35
Identities = 83/164 (50%), Positives = 96/164 (58%)
Frame = +2
Query: 257 RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQS 436
R DP+SPLYS K+FE L L NL +GVY MGFN PSKIQETALP LLADPP NMIAQSQS
Sbjct: 92 RSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQS 151
Query: 437 GTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLEG 616
GTGKTAAFVL MLSRVD+ K YPQ L P + K+ + + + G
Sbjct: 152 GTGKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRG 211
Query: 617 KNFPGVQKSQITFLLVLQERCLIGVSSLACLIWVKLKFFVLDEA 748
FP QK ++ L + C K+ FVLDEA
Sbjct: 212 NQFPRGQKCTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEA 255
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE LK LL G++ GF+ PS IQE ++P LA ++++A++++GTGKTAA+++ +L
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAG--RDILARAKNGTGKTAAYLVPLL 106
Query: 476 SRVDSNKNYPQYCVLVP 526
R D+ KN Q VLVP
Sbjct: 107 ERTDTTKNCIQALVLVP 123
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE LK LL G++ GF+ PS IQE ++P LA ++++A++++GTGKTAA+++ +L
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAG--RDILARAKNGTGKTAAYLVPLL 106
Query: 476 SRVDSNKNYPQYCVLVP 526
R D+ KN Q VLVP
Sbjct: 107 ERTDTTKNCIQALVLVP 123
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F +L L P LL+G+ GF PS IQ A+P L ++IAQ++SGTGKT F + L
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIP--LGRCGLDLIAQAKSGTGKTCVFSVIAL 72
Query: 476 SRVDSNKNYPQYCVLVP 526
V + N Q +L P
Sbjct: 73 ENVITESNCIQIIILTP 89
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD--HILIGTPGKM 678
PT E+A+Q +V + + K + G L K HI +GTPG++
Sbjct: 89 PTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRV 142
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +2
Query: 347 GFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
GF PS IQ+ A+ +L +++IAQ+QSGTGKTA F +++L +D+ PQ VL P
Sbjct: 16 GFEKPSAIQQRAIKPILKG--RDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSP 73
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMFD 684
PT ELA Q +V + + ++ + G + + D HI+ GTPG++FD
Sbjct: 73 PTRELANQIQKVVLALGDYM-SVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFD 128
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 20/89 (22%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL-PTLLADPP------------------ 409
V++F+ ++LK LL+G+YA GF PS IQ+ A+ P P
Sbjct: 62 VESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNHYVLS 121
Query: 410 -QNMIAQSQSGTGKTAAFVLAMLSRVDSN 493
+++IAQ+QSGTGKTA F +++L +D+N
Sbjct: 122 ARDVIAQAQSGTGKTATFAISILQEIDTN 150
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS-KITD--HILIGTPGKMFDWGV 693
PT ELA Q +V + + +K + G + K+ + H+++GTPG++FD +
Sbjct: 167 PTRELAQQIQKVVLALGDYM-HVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDM-I 224
Query: 694 KFGMFDMGKIKVF 732
G+ + IK+F
Sbjct: 225 NRGVLNTRDIKLF 237
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 430
+KD S+ + F LKP LL+ + GF PS++Q +P + ++I Q+
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDIICQA 91
Query: 431 QSGTGKTAAFVLAMLSRVD 487
+SG GKTA FVLA L +++
Sbjct: 92 KSGMGKTAVFVLATLQQLE 110
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 430
+KD S+ + F LKP LL+ + GF PS++Q +P + ++I Q+
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDIICQA 91
Query: 431 QSGTGKTAAFVLAMLSRVD 487
+SG GKTA FVLA L +++
Sbjct: 92 KSGMGKTAVFVLATLQQLE 110
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/63 (36%), Positives = 41/63 (65%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE + L LL V G+ P+ +Q+ A+P + ++++A +Q+G+GKTAAF++ +L
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAIP--IVKGKRDLMACAQTGSGKTAAFLIPIL 934
Query: 476 SRV 484
SR+
Sbjct: 935 SRI 937
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/70 (30%), Positives = 45/70 (64%)
Frame = +2
Query: 269 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 448
N+P+ + +FE +L L V + P+ +Q+ ++P ++A ++++A +Q+G+GK
Sbjct: 704 NNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAG--RDVMACAQTGSGK 761
Query: 449 TAAFVLAMLS 478
TAAF+L +++
Sbjct: 762 TAAFLLPVMT 771
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ +F L L+ + G+ P+ +Q+ ALP ++A ++++A +Q+G+GKTAA++L
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAG--RDLMACAQTGSGKTAAYML 535
Query: 467 AML-SRVDSNKNYP 505
+L S + N P
Sbjct: 536 PVLTSLIKQGLNAP 549
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP-RGSKITD--HILIGTPGKMFDW 687
PT ELA Q A K + P IK+ G +P + S++ H L+GTPG++ D+
Sbjct: 560 PTRELAKQIYIEARKFSDHTP-IKVCVCYGGVSVPYQASQLERGCHFLVGTPGRLQDF 616
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/57 (33%), Positives = 35/57 (61%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
F + P L++ + MG P IQE ALP++ + ++++ +S++GTGK+ F+L
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSH--KSLLIKSETGTGKSLVFLL 216
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+F L L L+ AMG P++IQ +P +L ++ I +++G+GKTAAF L +
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQG--RDCIGCAKTGSGKTAAFALPI 65
Query: 473 LSRV 484
L ++
Sbjct: 66 LQKL 69
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V +F L L+ ++LK + A+ + P+ IQ +P ++ ++I +Q+G+GKT A++
Sbjct: 377 VYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHR--HHVICAAQTGSGKTLAYLA 434
Query: 467 AMLSRVDSNK---------NYPQYCVLVP 526
++ R+ ++ P+ C++VP
Sbjct: 435 PLVHRLREDEERHGILARLKRPRACIVVP 463
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/65 (27%), Positives = 41/65 (63%)
Frame = +2
Query: 281 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF 460
+ ++ ++ + ++L+ V +G+ P+ IQ A+P L + +++I +++G+GKTAAF
Sbjct: 98 FPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQN--RDIIGVAETGSGKTAAF 155
Query: 461 VLAML 475
+ +L
Sbjct: 156 AIPLL 160
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 329 KGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 484
+ V +GF P+ IQ + +P L +++ A + +GTGKTAAF+L +L R+
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMG--KDVCACAATGTGKTAAFMLPILERL 72
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/61 (27%), Positives = 37/61 (60%)
Frame = +2
Query: 269 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 448
N+P+ + +FE +L L V + P+ +Q+ ++P ++A ++++A +Q+G+GK
Sbjct: 127 NNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAG--RDVMACAQTGSGK 184
Query: 449 T 451
T
Sbjct: 185 T 185
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +2
Query: 323 LLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 484
++ + + + P++IQ ALP L+ +++I +++G+GKTAAF+ L +
Sbjct: 528 MMASIRKLEYTQPTQIQCQALPIALSG--RDIIGIAKTGSGKTAAFLWPALVHI 579
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 31.5 bits (68), Expect = 0.77
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI---TDHILIGTPGKMFDWGV 693
PT ELA+Q + K AK+ +K+ V G P+ ++ I++ TPG++ W +
Sbjct: 226 PTRELALQVKDHLVKAAKY-TSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL--WEL 282
Query: 694 KFGMFDMGK 720
+F GK
Sbjct: 283 ISQVFTHGK 291
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-----HILIGTPGKMFD 684
PT ELA Q EVA + K C KL+ P+G +I + I I TPG++ D
Sbjct: 140 PTRELAQQVQEVAYSVGKHC---KLRSTCIYGGAPKGPQIRELERGVEICIATPGRLID 195
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +2
Query: 410 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK 496
+++I Q+++GTGKT +F L ++ ++ K
Sbjct: 111 EDVIGQARTGTGKTLSFALPLVEKLQDGK 139
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD--HILIGTPGKMFDWGVK 696
PT ELA Q G + K E+ Y E P+ + I +L+GTPG++ D+ ++
Sbjct: 155 PTRELAKQVGNEFENL-KSNLEVYCIYGGMPYE-PQENAINSGLDVLVGTPGRILDF-MR 211
Query: 697 FGMFDMGKIK 726
G D+ K+K
Sbjct: 212 QGTLDLSKLK 221
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/28 (32%), Positives = 23/28 (82%)
Frame = +2
Query: 410 QNMIAQSQSGTGKTAAFVLAMLSRVDSN 493
++++A +++G+GKTAAF++ M ++ ++
Sbjct: 319 KDVVAMARTGSGKTAAFLIPMFEKLQTH 346
>SB_24445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 437 GTGKTAAFVLAMLSRVDSNKNYPQYCVLVP 526
G + +A LS+VDSNK YP +VP
Sbjct: 241 GIVSSYGLAIAFLSQVDSNKPYPALVSIVP 270
>SB_6602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 492 LESTLLNIAKTKAAVFPVPDCDWAI 418
+E+T N +A +PVPD DW I
Sbjct: 568 IEATFANFTCPEAFGYPVPDVDWVI 592
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,865,998
Number of Sequences: 59808
Number of extensions: 456823
Number of successful extensions: 944
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -