Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0707
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 125 3e-29
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 125 3e-29
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 125 3e-29
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 72 4e-13
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 72 5e-13
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 68 8e-12
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 68 8e-12
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 51 1e-06
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 50 2e-06
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 49 3e-06
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 48 1e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 48 1e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 47 1e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 47 2e-05
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 46 2e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 44 2e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 44 2e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 44 2e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 3e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 3e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 40 0.001
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 40 0.003
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 37 0.014
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 37 0.014
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 35 0.055
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 32 0.51
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 31 1.2
Z92808-4|CAD54148.1| 928|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z92808-3|CAB07268.1| 946|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81476-15|CAD54124.1| 928|Caenorhabditis elegans Hypothetical p... 30 2.1
Z81476-14|CAB03924.1| 946|Caenorhabditis elegans Hypothetical p... 30 2.1
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 29 3.6
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 29 3.6
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 29 3.6
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 28 6.3
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 125 bits (302), Expect = 3e-29
Identities = 67/167 (40%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Frame = +2
Query: 254 KRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 433
+R+DP SPLYS+ +F L LKP +LK + M F P++IQETALP LL +PP N+IAQ+Q
Sbjct: 197 QRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQ 256
Query: 434 SGTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLE 613
SGTGKTAAFVL ML R+D N PQ L P + ++ ++++K F+ ++
Sbjct: 257 SGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIK 316
Query: 614 GKNFPGVQKSQITFLLVLQERCLIG--VSSLACLIWVKLKFFVLDEA 748
G N ++ ++T +V+ + + C+ K++ VLDEA
Sbjct: 317 GGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEA 363
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 125 bits (302), Expect = 3e-29
Identities = 67/167 (40%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Frame = +2
Query: 254 KRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 433
+R+DP SPLYS+ +F L LKP +LK + M F P++IQETALP LL +PP N+IAQ+Q
Sbjct: 222 QRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQ 281
Query: 434 SGTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLE 613
SGTGKTAAFVL ML R+D N PQ L P + ++ ++++K F+ ++
Sbjct: 282 SGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIK 341
Query: 614 GKNFPGVQKSQITFLLVLQERCLIG--VSSLACLIWVKLKFFVLDEA 748
G N ++ ++T +V+ + + C+ K++ VLDEA
Sbjct: 342 GGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEA 388
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 125 bits (302), Expect = 3e-29
Identities = 67/167 (40%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Frame = +2
Query: 254 KRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 433
+R+DP SPLYS+ +F L LKP +LK + M F P++IQETALP LL +PP N+IAQ+Q
Sbjct: 606 QRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQ 665
Query: 434 SGTGKTAAFVLAMLSRVDSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SMQLE 613
SGTGKTAAFVL ML R+D N PQ L P + ++ ++++K F+ ++
Sbjct: 666 SGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIK 725
Query: 614 GKNFPGVQKSQITFLLVLQERCLIG--VSSLACLIWVKLKFFVLDEA 748
G N ++ ++T +V+ + + C+ K++ VLDEA
Sbjct: 726 GGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEA 772
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ TF+ + L+ +LL+G+YA GF PS IQ+ A+P +L +++IAQ+QSGTGKTA F +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAIL--KARDVIAQAQSGTGKTATFSI 82
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
++L +D+ Q +L P
Sbjct: 83 SVLQSLDTQVRETQALILSP 102
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMFD 684
PT ELA+Q +V + + ++ + G L + D H++ GTPG++FD
Sbjct: 102 PTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 157
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ TF+ + L+ +LL+G+YA GF PS IQ+ A+P +L +++IAQ+QSGTGKTA F +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAIL--KARDVIAQAQSGTGKTATFSI 82
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
++L +D+ Q +L P
Sbjct: 83 SVLQSLDTQVRETQALILSP 102
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMFD 684
PT ELA+Q +V + + ++ + G L + D H++ GTPG++FD
Sbjct: 102 PTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 157
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 67.7 bits (158), Expect = 8e-12
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V++F+ + LK LL+G+Y GF PS IQ+ A+ +++IAQ+QSGTGKTA F +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG--KDVIAQAQSGTGKTATFSV 85
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
++L R+D + Q V+ P
Sbjct: 86 SILQRIDHEDPHVQALVMAP 105
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMFDWGV 693
PT ELA Q +V + + ++ + + + G + + + H+++GTPG++ D +
Sbjct: 105 PTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDM-I 162
Query: 694 KFGMFDMGKIKVF 732
D +IK+F
Sbjct: 163 NRNALDTSRIKMF 175
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 67.7 bits (158), Expect = 8e-12
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
V++F+ + LK LL+G+Y GF PS IQ+ A+ +++IAQ+QSGTGKTA F +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG--KDVIAQAQSGTGKTATFSV 85
Query: 467 AMLSRVDSNKNYPQYCVLVP 526
++L R+D + Q V+ P
Sbjct: 86 SILQRIDHEDPHVQALVMAP 105
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMFDWGV 693
PT ELA Q +V + + ++ + + + G + + + H+++GTPG++ D +
Sbjct: 105 PTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDM-I 162
Query: 694 KFGMFDMGKIKVF 732
D +IK+F
Sbjct: 163 NRNALDTSRIKMF 175
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
+FE ++L +LK G++ P+ IQ+ +P L +++ A + +GTGKTAAFVL +
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTG--KDICACAATGTGKTAAFVLPI 206
Query: 473 LSRV---DSNKNYPQYCVLVPHMN*PYKLVKLLQKWQNFV 583
L R+ + + VLVP ++ ++ +K F+
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFI 246
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = +2
Query: 305 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 484
+ LK LL+G+Y GF PS IQ++A+ +++ QSQ+G+GKT ++ +L +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTG--KDVTIQSQAGSGKTVISLIDILQGI 58
Query: 485 DSNKNYPQYCVLVP 526
D + Q +L P
Sbjct: 59 DCEDAHLQVILLAP 72
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/77 (32%), Positives = 45/77 (58%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE L +LL G++ G+ PS IQE ++ L Q+++A++++GTGKT A+ + ++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTG--QDILARAKNGTGKTGAYCIPVI 102
Query: 476 SRVDSNKNYPQYCVLVP 526
++ Q V+VP
Sbjct: 103 EKIQPALKAIQAMVIVP 119
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKITDHILIGTPGKMFD 684
PT ELA+QT ++ +++K ++K+ G +L T H++I TPG++ D
Sbjct: 119 PTRELALQTSQICVELSKHI-QLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILD 174
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TFE+L + L+ + F+ PS +Q A+P L ++M+ Q++SGTGKT F +
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLG--RDMLVQAKSGTGKTLVFSVLA 80
Query: 473 LSRVDSNKNYPQYCVLVP 526
+ +DS ++ Q ++ P
Sbjct: 81 VENLDSRSSHIQKVIVTP 98
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +2
Query: 293 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 472
TFE+L + L+ + F+ PS +Q A+P L ++M+ Q++SGTGKT F +
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLG--RDMLVQAKSGTGKTLVFSVLA 80
Query: 473 LSRVDSNKNYPQYCVLVP 526
+ +DS ++ Q ++ P
Sbjct: 81 VENLDSRSSHIQKVIVTP 98
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTF +L + K V G++ + IQ+ ALP L +++A +Q+G+GKTAAF+L
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALP--LVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 470 MLSRV--DSNKN-------YPQYCVLVP 526
+++R+ D+N N YP+ +L P
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTP 426
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTF +L + K V G++ + IQ+ ALP L +++A +Q+G+GKTAAF+L
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALP--LVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 470 MLSRV--DSNKN-------YPQYCVLVP 526
+++R+ D+N N YP+ +L P
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTP 426
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTF +L + K V G++ + IQ+ ALP L +++A +Q+G+GKTAAF+L
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALP--LVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 470 MLSRV--DSNKN-------YPQYCVLVP 526
+++R+ D+N N YP+ +L P
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTP 426
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/67 (29%), Positives = 46/67 (68%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
+++ F P +++ V G++ P+ +Q+ ++PTLLA+ +++++ +Q+G+GKTAAF+
Sbjct: 137 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLAN--RDLMSCAQTGSGKTAAFL 194
Query: 464 LAMLSRV 484
L ++ +
Sbjct: 195 LPIIQHI 201
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS----KITDHILIGTPGKMFD 684
PT ELAIQ + A K + + I+ G E R + HILI TPG++ D
Sbjct: 230 PTRELAIQIHKEATKFS-YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLID 286
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/67 (29%), Positives = 46/67 (68%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
+++ F P +++ V G++ P+ +Q+ ++PTLLA+ +++++ +Q+G+GKTAAF+
Sbjct: 121 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLAN--RDLMSCAQTGSGKTAAFL 178
Query: 464 LAMLSRV 484
L ++ +
Sbjct: 179 LPIIQHI 185
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS----KITDHILIGTPGKMFD 684
PT ELAIQ + A K + + I+ G E R + HILI TPG++ D
Sbjct: 214 PTRELAIQIHKEATKFS-YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLID 270
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/67 (29%), Positives = 46/67 (68%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
+++ F P +++ V G++ P+ +Q+ ++PTLLA+ +++++ +Q+G+GKTAAF+
Sbjct: 118 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLAN--RDLMSCAQTGSGKTAAFL 175
Query: 464 LAMLSRV 484
L ++ +
Sbjct: 176 LPIIQHI 182
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS----KITDHILIGTPGKMFD 684
PT ELAIQ + A K + + I+ G E R + HILI TPG++ D
Sbjct: 211 PTRELAIQIHKEATKFS-YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLID 267
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/63 (33%), Positives = 41/63 (65%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
++ + L ++ K + GFN P+ IQ +P ++ ++++A S++G+GKTAAFV+ ML
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDG--KDVVAMSRTGSGKTAAFVIPML 83
Query: 476 SRV 484
++
Sbjct: 84 QKL 86
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITDH--ILIGTPGKM 678
PT ELA+QT +V ++ +F ++ V G+++ + S I ++ IL+ TPG++
Sbjct: 101 PTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIHENPDILLATPGRL 154
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/63 (33%), Positives = 41/63 (65%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
++ + L ++ K + GFN P+ IQ +P ++ ++++A S++G+GKTAAFV+ ML
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDG--KDVVAMSRTGSGKTAAFVIPML 83
Query: 476 SRV 484
++
Sbjct: 84 QKL 86
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +1
Query: 523 PTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITDH--ILIGTPGKM 678
PT ELA+QT +V ++ +F ++ V G+++ + S I ++ IL+ TPG++
Sbjct: 101 PTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIHENPDILLATPGRL 154
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F LKP +L+ + GF PS++Q +P + +++ Q++SG GKTA FV+ L
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILG--MDVVCQAKSGMGKTAVFVITTL 100
Query: 476 SRVD 487
+++
Sbjct: 101 QQLE 104
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 526 TYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK--ITD--HILIGTPGKMFDWGV 693
T ELA Q + + +K+ P +K+ G + + + D HI++GTPG+M
Sbjct: 118 TRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLAL-A 176
Query: 694 KFGMFDMGKIKVF 732
+ G + K+K F
Sbjct: 177 RSGKLKLDKVKYF 189
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F LKP +L+ + GF PS++Q +P + +++ Q++SG GKTA FV+ L
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILG--MDVVCQAKSGMGKTAVFVITTL 100
Query: 476 SRVD 487
+++
Sbjct: 101 QQLE 104
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 526 TYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK--ITD--HILIGTPGKMFDWGV 693
T ELA Q + + +K+ P +K+ G + + + D HI++GTPG+M
Sbjct: 118 TRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLAL-A 176
Query: 694 KFGMFDMGKIKVF 732
+ G + K+K F
Sbjct: 177 RSGKLKLDKVKYF 189
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
F LKP +L+ + GF PS++Q +P + +++ Q++SG GKTA FV+ L
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILG--MDVVCQAKSGMGKTAVFVITTL 99
Query: 476 SRVD 487
+++
Sbjct: 100 QQLE 103
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 526 TYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK--ITD--HILIGTPGKMFDWGV 693
T ELA Q + + +K+ P +K+ G + + + D HI++GTPG+M
Sbjct: 117 TRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLAL-A 175
Query: 694 KFGMFDMGKIKVF 732
+ G + K+K F
Sbjct: 176 RSGKLKLDKVKYF 188
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTF +L + K V G+ + IQ+ LP L +++A +Q+G+GKTAAF+L
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLP--LIHQGHDIMACAQTGSGKTAAFLLP 609
Query: 470 MLSR-VDSN 493
+++R +D N
Sbjct: 610 IMARLIDEN 618
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTF +L + K V G+ + IQ+ LP L +++A +Q+G+GKTAAF+L
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLP--LIHQGHDIMACAQTGSGKTAAFLLP 609
Query: 470 MLSR-VDSN 493
+++R +D N
Sbjct: 610 IMARLIDEN 618
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTF +L + K V G+ + IQ+ LP L +++A +Q+G+GKTAAF+L
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLP--LIHQGHDIMACAQTGSGKTAAFLLP 609
Query: 470 MLSR-VDSN 493
+++R +D N
Sbjct: 610 IMARLIDEN 618
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/70 (34%), Positives = 45/70 (64%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
K+F + ++ + V G+ + IQ+ LP L+AD ++++A +Q+G+GKTAAF+L
Sbjct: 298 KSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLP-LVADG-KDILACAQTGSGKTAAFLLP 355
Query: 470 MLSRVDSNKN 499
++SR+ K+
Sbjct: 356 IMSRLILEKD 365
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/70 (34%), Positives = 45/70 (64%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
K+F + ++ + V G+ + IQ+ LP L+AD ++++A +Q+G+GKTAAF+L
Sbjct: 298 KSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLP-LVADG-KDILACAQTGSGKTAAFLLP 355
Query: 470 MLSRVDSNKN 499
++SR+ K+
Sbjct: 356 IMSRLILEKD 365
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 287 VKTFE-ALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
V +FE A +++ + GF PS IQ P LL+ Q+ I SQ+G+GKT AF+
Sbjct: 82 VNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSG--QDCIGVSQTGSGKTLAFL 139
Query: 464 LAMLSRVDS 490
L L +D+
Sbjct: 140 LPALLHIDA 148
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 41.5 bits (93), Expect = 6e-04
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
K+F L + L +G+ PSKIQ+ ALP L +++I +++G+GKT AF +
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQG--KDVIGLAETGSGKTGAFAIP 101
Query: 470 MLSRVDSNKNYPQ--YC-VLVP 526
+L S ++PQ +C VL P
Sbjct: 102 VL---QSLLDHPQAFFCLVLTP 120
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/65 (26%), Positives = 41/65 (63%)
Frame = +2
Query: 290 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 469
KTF L +LK + +G+ +++QE+ + L + +N++ ++++G+GKT AF++
Sbjct: 89 KTFADFGLDERILKSIGELGWEKANQVQESVISLALEN--KNIMGRARTGSGKTGAFLIP 146
Query: 470 MLSRV 484
++ ++
Sbjct: 147 LVQKL 151
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +2
Query: 293 TFEALHLK--PNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
TF +L K NLLK V +GF ++IQ ++ LL ++++A +++G+GKT AF+L
Sbjct: 67 TFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEG--KDVLASAKTGSGKTLAFLL 124
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/68 (29%), Positives = 40/68 (58%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
++ +E + + V +G+ P+ IQ A+P L + +++I +++G+GKTAAF+L
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQN--RDVIGVAETGSGKTAAFLL 357
Query: 467 AMLSRVDS 490
+L + S
Sbjct: 358 PLLVWITS 365
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/66 (24%), Positives = 41/66 (62%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+ F L L + + + G++ P+ +Q+ ++P L +++++ +Q+G+GKTAAF++
Sbjct: 165 ISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGG--RDLMSCAQTGSGKTAAFLV 222
Query: 467 AMLSRV 484
+++ +
Sbjct: 223 PLVNAI 228
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/66 (24%), Positives = 39/66 (59%)
Frame = +2
Query: 287 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 466
+KT+ + ++ + ++ P+ IQ A+P++++ +++I +++G+GKT AF+L
Sbjct: 303 IKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSG--RDVIGIAKTGSGKTLAFLL 360
Query: 467 AMLSRV 484
M +
Sbjct: 361 PMFRHI 366
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
++KTF L P LL+ V+ + + + +Q + LL +++ +S +G+GKT AFV
Sbjct: 9 ALKTFRE-KLGPELLE-VFDKSYKSFTDVQVLSGTHLLN--LSDVVVESPTGSGKTLAFV 64
Query: 464 LAMLSRVDSNKNYP 505
L M+ + + K P
Sbjct: 65 LPMMRMIQNAKLQP 78
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +2
Query: 311 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 484
L P +L+ + + +N IQ +P +L +++ Q+++ GKTAAF L ++ ++
Sbjct: 388 LHPTILETLKRIKYNNVRTIQGAMIPQVLDG--HDVLGQAETSAGKTAAFGLPIIDKI 443
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +2
Query: 296 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
FE L L+G+ + P++IQ + L +++ +++G+GKT A V+ +L
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTG--SDVVGAAKTGSGKTLALVIPVL 135
Query: 476 SRVDSNKNYPQY 511
+ K P Y
Sbjct: 136 EALWRAKWSPDY 147
>Z92808-4|CAD54148.1| 928|Caenorhabditis elegans Hypothetical
protein M04C3.1b protein.
Length = 928
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 185 SRYFSFNENHTARSS*I*TRYRNKRKDPNSPLYSVKTFEALHL-KPNLLKGVYAMGFNAP 361
+R S N N AR+ + T Y +K+ N P++ +E + L + N + + + F A
Sbjct: 325 NRTKSRNSNELARNDIVITTYDTLKKEANLPIFKAVKWERIILYEANKISDMNTVRFQAI 384
Query: 362 SKIQETALPTLLADPPQNMIA 424
++Q L P Q ++
Sbjct: 385 CQLQAKYRWCLTESPKQQSLS 405
>Z92808-3|CAB07268.1| 946|Caenorhabditis elegans Hypothetical
protein M04C3.1a protein.
Length = 946
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 185 SRYFSFNENHTARSS*I*TRYRNKRKDPNSPLYSVKTFEALHL-KPNLLKGVYAMGFNAP 361
+R S N N AR+ + T Y +K+ N P++ +E + L + N + + + F A
Sbjct: 325 NRTKSRNSNELARNDIVITTYDTLKKEANLPIFKAVKWERIILYEANKISDMNTVRFQAI 384
Query: 362 SKIQETALPTLLADPPQNMIA 424
++Q L P Q ++
Sbjct: 385 CQLQAKYRWCLTESPKQQSLS 405
>Z81476-15|CAD54124.1| 928|Caenorhabditis elegans Hypothetical
protein M04C3.1b protein.
Length = 928
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 185 SRYFSFNENHTARSS*I*TRYRNKRKDPNSPLYSVKTFEALHL-KPNLLKGVYAMGFNAP 361
+R S N N AR+ + T Y +K+ N P++ +E + L + N + + + F A
Sbjct: 325 NRTKSRNSNELARNDIVITTYDTLKKEANLPIFKAVKWERIILYEANKISDMNTVRFQAI 384
Query: 362 SKIQETALPTLLADPPQNMIA 424
++Q L P Q ++
Sbjct: 385 CQLQAKYRWCLTESPKQQSLS 405
>Z81476-14|CAB03924.1| 946|Caenorhabditis elegans Hypothetical
protein M04C3.1a protein.
Length = 946
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 185 SRYFSFNENHTARSS*I*TRYRNKRKDPNSPLYSVKTFEALHL-KPNLLKGVYAMGFNAP 361
+R S N N AR+ + T Y +K+ N P++ +E + L + N + + + F A
Sbjct: 325 NRTKSRNSNELARNDIVITTYDTLKKEANLPIFKAVKWERIILYEANKISDMNTVRFQAI 384
Query: 362 SKIQETALPTLLADPPQNMIA 424
++Q L P Q ++
Sbjct: 385 CQLQAKYRWCLTESPKQQSLS 405
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 347 GFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 475
G P+ IQ +P L+ ++MI + +G+GKT FVL ++
Sbjct: 209 GIVTPTAIQIQGIPVALSG--RDMIGIASTGSGKTMTFVLPLV 249
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
+ K F L + + + + M + +Q +P +L +++ +++GTGKT AF
Sbjct: 87 TTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEG--SDILGCARTGTGKTLAFA 144
Query: 464 LAMLSRV 484
+ +L ++
Sbjct: 145 IPILQKL 151
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = +2
Query: 284 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 463
+ K F L + + + + M + +Q +P +L +++ +++GTGKT AF
Sbjct: 87 TTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEG--SDILGCARTGTGKTLAFA 144
Query: 464 LAMLSRV 484
+ +L ++
Sbjct: 145 IPILQKL 151
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 177 GYQVHHQNLFLDYVF 133
GY+ HH NLF+ Y F
Sbjct: 650 GYETHHANLFIKYTF 664
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,419,264
Number of Sequences: 27780
Number of extensions: 364323
Number of successful extensions: 976
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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