Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0705
         (542 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   5.3  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 298 PVARWTNGHYFSGLVELQNFLKMW 369
           PVA WTNG       E+  F  MW
Sbjct: 137 PVAAWTNG------TEVAKFKNMW 154


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 298 PVARWTNGHYFSGLVELQNFLKMW 369
           PVA WTNG       E+  F  MW
Sbjct: 137 PVAAWTNG------TEVAKFKNMW 154


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 343 QQVPKNNDH*STVPPG 296
           Q  PKN  H   +PPG
Sbjct: 228 QNNPKNKQHNFNLPPG 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,298
Number of Sequences: 336
Number of extensions: 2871
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)