Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0705
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    26   0.70 
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    26   0.92 
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    24   2.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   4.9  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    23   8.6  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    23   8.6  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    23   8.6  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.6  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 133 RYSGHSVRARKAPEALGLPDTVLASSL*EHISV 231
           R  G S+++RK P   G+P+  LA+++ E  ++
Sbjct: 407 RNIGRSLKSRKVPGPDGIPNAALATAMIEEPTI 439


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 25.8 bits (54), Expect = 0.92
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 358 RNFAIQQVPKNNDH*STVPPGIA*AMYVYTTTIIKLQLHYY 236
           R+F +Q +   +DH  T+ PG+    +  T T  +L LHYY
Sbjct: 94  RDF-LQNLDALHDHLGTLYPGMRAPSFRCTETNGQLVLHYY 133


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 420 EYRSKCTYTYRRCINIDNLFCITIATRDATVGSR 521
           E+R +  +T   C+NI N F +  + R+    +R
Sbjct: 124 EFREQEKFTKSECVNIRNNFHLPKSNRNCRTAAR 157


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 148 SVRARKAPEALGLPDTVLASSL*EHISV 231
           S+  RKAP   G+P+  L +++ +H  +
Sbjct: 430 SLNPRKAPGLDGVPNAALTAAIRKHTDI 457


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 158 ALTECPEYRVRFYLK 114
           AL+ECP++ V  YL+
Sbjct: 152 ALSECPQFVVNSYLE 166


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 158 ALTECPEYRVRFYLK 114
           AL+ECP++ V  YL+
Sbjct: 152 ALSECPQFVVNSYLE 166


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 509 SGITCCNCYT 480
           SG+TC NC T
Sbjct: 57  SGVTCANCQT 66


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 157 ARKAPEALGLPDTVLASSL*EHISV 231
           +RKAP   G+P+  L +++ +H +V
Sbjct: 447 SRKAPGLDGIPNIALKTAIKKHTAV 471


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,281
Number of Sequences: 2352
Number of extensions: 11906
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)