Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0705
         (542 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    24   1.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    24   1.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   3.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   4.6  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   4.6  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   4.6  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   4.6  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   4.6  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   4.6  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   4.6  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   4.6  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   4.6  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   4.6  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    22   4.6  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   4.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   4.6  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    22   4.6  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   4.6  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   4.6  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   4.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.1  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    21   6.1  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    21   6.1  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   6.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.1  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 528 LHYDYPQWHHVL 493
           L Y+YP W HVL
Sbjct: 520 LTYEYPWWSHVL 531


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 528 LHYDYPQWHHVL 493
           L Y+YP W HVL
Sbjct: 573 LTYEYPWWSHVL 584


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 374 GNTILFVYLIYSNRPRIPFKMY 439
           GNT++F++ +    P +  K+Y
Sbjct: 336 GNTLVFLFDLIGRNPTVQNKLY 357


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 385 FIRLFDLF*SPTNTVQNVHTLIGDVSILITS 477
           F RL +LF   T T+ ++H++ GD    +TS
Sbjct: 96  FKRL-ELFNITTTTIHSIHSIDGDEENGLTS 125


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 526 TLRLPTVASRVAIVIQKRL 470
           T RLP V SR+ I++   L
Sbjct: 375 TQRLPAVLSRIGIILASPL 393


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNKTIHNNNN 95


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 318 LSNKTIHNNNN 328


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 318 LSNKTIHNNNN 328


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 307 LSNKTIHNNNN 317


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 318 LSNKTIHNNNN 328


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 318 LSNKTIHNNNN 328


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 441 YTYRRCINIDNLFCITIATRDATV 512
           +TYR    + N F +++A  D  V
Sbjct: 62  FTYRPLRIVQNFFIVSLAVADLAV 85


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 441 YTYRRCINIDNLFCITIATRDATV 512
           +TYR    + N F +++A  D  V
Sbjct: 62  FTYRPLRIVQNFFIVSLAVADLAV 85


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 388 IRLFDLF*SPTNTVQNVHTLIGDVSILITSFV 483
           I + DLF +  N +QN+  +I   +  IT ++
Sbjct: 46  ILIKDLFDNVHNHIQNIFKIIKSTNEKITRYI 77


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 388 IRLFDLF*SPTNTVQNVHTLIGDVSILITSFV 483
           I + DLF +  N +QN+  +I   +  IT ++
Sbjct: 29  ILIKDLFDNVHNHIQNIFKIIKSTNEKITRYI 60


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 290 MSNVCVHNNNN 258
           +SN  +HNNNN
Sbjct: 85  LSNRTIHNNNN 95


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 441 YTYRRCINIDNLFCITIATRDATV 512
           +TYR    + N F +++A  D  V
Sbjct: 62  FTYRPLRIVQNFFIVSLAVADLAV 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,926
Number of Sequences: 438
Number of extensions: 3553
Number of successful extensions: 33
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)