Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0705
         (542 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g10240.1 68414.m01154 far-red impaired responsive protein, pu...    28   3.5  
At5g42410.1 68418.m05163 auxin-responsive family protein similar...    28   4.6  
At5g55320.1 68418.m06894 membrane bound O-acyl transferase (MBOA...    27   6.1  

>At1g10240.1 68414.m01154 far-red impaired responsive protein,
           putative similar to far-red impaired response protein
           FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
           contains Pfam:PF03101 domain: FAR1 family
          Length = 680

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -1

Query: 272 HNNNNKASITLLLLTLMCSYRLLASTVSGRPKASGAFL 159
           H NN  AS +L  L  + S+ L   T++GR KA  AF+
Sbjct: 421 HINNLYASRSLWSLPYLRSHFLAGMTLTGRSKAINAFI 458


>At5g42410.1 68418.m05163 auxin-responsive family protein similar to
           auxin-induced protein SAUR (GI:3043536) [Raphanus
           sativus]
          Length = 111

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 314 VHRATGHCMSNVCVHNNNNK 255
           +H+ T H  ++VC HNN+ K
Sbjct: 90  LHKTTNHHNNSVCFHNNSTK 109


>At5g55320.1 68418.m06894 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related similar to  wax
           synthase [Simmondsia chinensis] GI:5020219 [EC 2.3.1.75]
          Length = 339

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 267 VVYTYIAHAMPGGTVD*WSLFFGTC*IAK 353
           VV+ YI  AMP G V  + L  G C +A+
Sbjct: 243 VVFFYITRAMPTGEVALFFLLHGVCTVAE 271


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,302,873
Number of Sequences: 28952
Number of extensions: 223665
Number of successful extensions: 467
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)