BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0703 (694 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q6YQ78 Cluster: Putative uncharacterized protein; n=1; ... 38 0.31 >UniRef50_Q6YQ78 Cluster: Putative uncharacterized protein; n=1; Onion yellows phytoplasma|Rep: Putative uncharacterized protein - Onion yellows phytoplasma Length = 168 Score = 37.5 bits (83), Expect = 0.31 Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 3/32 (9%) Frame = +1 Query: 130 GIYIKLCLLVLFMNCCHFYTY-FFFS--FQCC 216 G+ LC V+F NCC+F+++ FFFS F CC Sbjct: 11 GLGCCLCSFVVFFNCCNFFSFSFFFSYCFSCC 42 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 576,233,546 Number of Sequences: 1657284 Number of extensions: 10460183 Number of successful extensions: 19898 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 19353 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19887 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 54545459628 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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