Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0702
(528 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Re... 50 3e-05
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 46 4e-04
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 46 7e-04
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 46 7e-04
UniRef50_Q1ZBI5 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 45 0.001
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 44 0.002
UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-direct... 44 0.002
UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetic... 43 0.005
UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1... 40 0.047
UniRef50_UPI0000E49101 Cluster: PREDICTED: similar to reverse tr... 39 0.082
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 37 0.25
UniRef50_Q9NAL5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.0
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 35 1.3
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 34 1.8
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 34 1.8
UniRef50_UPI00006A09F9 Cluster: UPI00006A09F9 related cluster; n... 34 2.3
UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|R... 34 2.3
UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Re... 34 2.3
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 34 2.3
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 33 3.1
UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse tr... 33 4.1
UniRef50_UPI0000D57919 Cluster: PREDICTED: hypothetical protein,... 33 4.1
UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles g... 32 7.1
UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Re... 32 7.1
UniRef50_A7SK58 Cluster: Predicted protein; n=1; Nematostella ve... 32 7.1
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p... 32 9.4
UniRef50_A3XIT2 Cluster: Probable secreted protein; n=1; Leeuwen... 32 9.4
UniRef50_A7NXH5 Cluster: Chromosome chr5 scaffold_2, whole genom... 32 9.4
UniRef50_O97333 Cluster: Putative uncharacterized protein MAL3P8... 32 9.4
>UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Rep:
Pol-like protein - Aedes aegypti (Yellowfever mosquito)
Length = 1208
Score = 50.4 bits (115), Expect = 3e-05
Identities = 28/76 (36%), Positives = 39/76 (51%)
Frame = -3
Query: 250 FGCMPTKSRGYQLYDLIDEFDLCVLNNGSFTTINYLNRNPSAIDXSFCSAPITPLCEWWV 71
+G + RG + D+ ++ DL +LN+G+ TT RN SAID S CS I W
Sbjct: 146 WGSVSPNDRGSLIMDVAEKLDLVILNDGA-TTFTRGQRN-SAIDVSLCSPSIVNRLLWTA 203
Query: 70 HDDSMGSYHFPTLTRV 23
+D MGS H P +
Sbjct: 204 KEDPMGSDHHPIFIHI 219
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 46.4 bits (105), Expect = 4e-04
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = -1
Query: 492 HGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRIS--KL 319
HGG ILI K++ + +Q+ +++L ++ T+ VYCPP F IS +
Sbjct: 64 HGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPP---RFPISEDQF 120
Query: 318 RNIIRDLPKPIYVAGDFNAHHGHLG 244
L AGD+NA H H G
Sbjct: 121 MEFFNTLGDRFIAAGDYNAKHTHWG 145
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 45.6 bits (103), Expect = 7e-04
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = -3
Query: 250 FGCMPTKSRGYQLYDLIDEFDLCVLNNGSFTTINYLNRNPSAIDXSFCSAPITPLCEWWV 71
+G T +RG ++ +I E L VLN+GS T ++ N + ID S S I +C W +
Sbjct: 143 WGSPRTNTRGKKIETVILENSLIVLNDGSPTHLSTHNTF-THIDISLISPQIAHMCSWSI 201
Query: 70 HDDSMGSYHFP 38
D+ GS HFP
Sbjct: 202 SDNLHGSDHFP 212
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 45.6 bits (103), Expect = 7e-04
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = -3
Query: 250 FGCMPTKSRGYQLYDLIDEFDLCVLNNGSFTTINYLNRNPSAIDXSFCSAPITPLCEWWV 71
+G T +RG L D+ + DLC+LN+ S T ++ + + ID + C + +W V
Sbjct: 139 WGSNNTDTRGRMLEDIFLQHDLCILNDASPTYLHPGTGSFTCIDLTVCVPGLLDDFKWSV 198
Query: 70 HDDSMGSYHFPTL 32
+D GS HFP +
Sbjct: 199 SNDLRGSDHFPII 211
Score = 41.1 bits (92), Expect = 0.015
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = -1
Query: 507 NAQNEHGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILC--VYCPPSNGSF 334
+A+ GGV IL+ + ++ +Q VA + + H I C +Y PP
Sbjct: 57 DAERASGGVCILVKDSIPHERVE--LQTTLQAVAARITL---HKVITCCSLYLPPGAPLN 111
Query: 333 RISKLRNIIRDLPKPIYVAGDFNAHH 256
R + + ++++ LP+P + GDFNAH+
Sbjct: 112 R-TDMEDLLKQLPRPYLILGDFNAHN 136
>UniRef50_Q1ZBI5 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 161
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = -1
Query: 489 GGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPP--SNGSFRISK-- 322
GGV I I ++ + T + ++TVA + H+TI VY PP +N +I K
Sbjct: 50 GGVLIGIGKGHTFSRVPTPRQEIMETVAKQARIGDLHVTIASVYIPPIANNEKEKIEKFK 109
Query: 321 --LRNIIRDLPKPIYVAGDFNAH 259
L N+ LP P+ + GDFN+H
Sbjct: 110 EDLGNLAVVLPGPLLILGDFNSH 132
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/84 (34%), Positives = 40/84 (47%)
Frame = -3
Query: 280 GWRFQRSPWAFGCMPTKSRGYQLYDLIDEFDLCVLNNGSFTTINYLNRNPSAIDXSFCSA 101
GW PW G T RG + ID L +LN+ S T + N + ID + CS
Sbjct: 134 GWHH---PW--GSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHNTY-THIDLTLCSP 187
Query: 100 PITPLCEWWVHDDSMGSYHFPTLT 29
+ P +W + +D GS HFP +T
Sbjct: 188 ILAPHAKWKILNDLHGSDHFPIIT 211
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = -1
Query: 489 GGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRNI 310
GGVAILI ++ I T F D + V + ++ + ++ Y PP N + S L ++
Sbjct: 408 GGVAILIRRNIRHRAINTDF-PDCEAVGVEIHTKSTPIRVIAFYAPP-NPKEKFSSLHSL 465
Query: 309 IRDLPKPIYVAGDFNAHHGHLG 244
+ P +AGD NA H G
Sbjct: 466 F-NTNIPTILAGDLNAKHTSWG 486
>UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=2; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 971
Score = 44.0 bits (99), Expect = 0.002
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -1
Query: 519 FPLPNAQNEHGGVAILINPYFKYNIIQ-TGFYQDIQTVALSLYVSGNHLTILCVYCPPSN 343
+P Q E GVAILI F ++ Q Q + +A+ Y+ N +T Y P
Sbjct: 58 YPAQQGQRETRGVAILIKKGFAFSEHQLPNNLQHLDCIAVDTYIDSNIITFFTYYNSPR- 116
Query: 342 GSFRISKLRNIIRDLPKPIYVAGDFNAHHGHLG 244
++L LPK I + GDFNA H G
Sbjct: 117 -QCLSNELMQYAASLPKAI-ILGDFNARHTDFG 147
>UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 973
Score = 42.7 bits (96), Expect = 0.005
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 271 FQRSPWAFGCMPTKSRGYQLYDLIDEFDLCVLNNGSFTTINYLNRNPSAIDXSFCSAPIT 92
F + +G + RG +L DLI E ++ VLN G+ T ++ S ID +F S +
Sbjct: 116 FNAKSYLWGNVSEDKRGKELADLIGELEMWVLNQGNQPTF-VRGQSSSIIDITFASPKVA 174
Query: 91 PLCE-WWVHDDSMGSYHFP 38
+ W VH+D+ H P
Sbjct: 175 QCVKGWHVHEDAPLGDHLP 193
>UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1;
Drosophila melanogaster|Rep: Endonuclease/reverse
transcriptase - Drosophila melanogaster (Fruit fly)
Length = 989
Score = 39.5 bits (88), Expect = 0.047
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -3
Query: 256 WA--FGCMPTKSRGYQLYDLIDEFDLCVLNNGSFTTINYLNRNPSAIDXSFCSAPITPLC 83
WA +G + +RG + D ++ DL +LN+G T N +R S ID +F S +
Sbjct: 129 WATEWGSRISNTRGRAVIDAMNLLDLVLLNDGFKPTFNN-DRGTSFIDVTFVSRVLVAGS 187
Query: 82 EWWVHDDSMGSYH 44
W VH+D S H
Sbjct: 188 NWMVHEDITLSDH 200
>UniRef50_UPI0000E49101 Cluster: PREDICTED: similar to reverse
transcriptase-like protein; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like protein - Strongylocentrotus
purpuratus
Length = 1028
Score = 38.7 bits (86), Expect = 0.082
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = -1
Query: 513 LPNAQNEHGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSN--- 343
+P A + GGV ++++ F + + L+++ S HL ++ VY PP++
Sbjct: 195 IPQATSTGGGVGVILHKAFDVVFHDRHAFSSFEYSDLTIHSSTKHLRLVTVYRPPTSKKN 254
Query: 342 ----GSF--RISKLRNIIRDLPKPIYVAGDFNAH 259
F S I++ KP+ + GDFN H
Sbjct: 255 KHSIADFCQEFSSFIEILQASNKPLLLVGDFNIH 288
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 37.1 bits (82), Expect = 0.25
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = -1
Query: 510 PNAQNEHGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFR 331
P+ N GG AILI + + +Q + + ++ VYCPP ++
Sbjct: 59 PSGGNAKGGAAILIKNSLAHFPLTPIATAKVQLAPAVIETALGPISFGAVYCPP-RFAWT 117
Query: 330 ISKLRNIIRDLPKPIYVAGDFNAHH 256
+ ++I+ + VAGD+NA H
Sbjct: 118 TDEFKDILEEFQTKFIVAGDWNASH 142
>UniRef50_Q9NAL5 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 1042
Score = 35.1 bits (77), Expect = 1.0
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Frame = -1
Query: 507 NAQNEHGGVAILINP---YFKYNIIQTGFYQDIQTVALSLYV-----SGNHLTILCVYCP 352
+ +N GGVAIL P K +I Q Y Q+ L+ V G ++ VY P
Sbjct: 434 HTKNSGGGVAILFKPPLVVTKLDIQQEHHYNGHQSEVLACRVLNPDYPGASFNLVVVYRP 493
Query: 351 PSNGSFRISKL-RNIIRDLPKPIYV-AGDFN 265
P NG +IS+L ++ LP YV GDFN
Sbjct: 494 PING--KISQLIAHLSSFLPSSEYVLMGDFN 522
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 34.7 bits (76), Expect = 1.3
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -3
Query: 265 RSPWAFGCMPTKSRGYQLYDLIDEFDLCVLNNG---SFTTINYLNRNPSAIDXSFCSAPI 95
+S W +G +RG + ++E +L +LN G +F TI R S +D + CS +
Sbjct: 605 KSTW-WGSPSIDNRGTSMLGTLEELELNILNTGEIPTFDTIRGGKRYKSYVDVTACSTDL 663
Query: 94 TPLCEWWVHDDSM 56
L W D+ +
Sbjct: 664 MDLVSDWRVDEGL 676
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = -1
Query: 489 GGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRNI 310
GG AI ++ K++++ T ++++ V +++ + L + Y P L+ +
Sbjct: 192 GGTAIFVSNRIKHSVLATPDLRNMEAVGINVATANGPLRLFACYNRPQIPILE-EDLQTL 250
Query: 309 IRDLPKPIYVAGDFNAHHGHLG 244
D P AGDFNA H + G
Sbjct: 251 F-DGNTPTIAAGDFNAKHINWG 271
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = -1
Query: 489 GGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRNI 310
GG AI ++ K++++ T ++++ V +++ + L + Y P L+ +
Sbjct: 549 GGTAIFVSNRIKHSVLATPDLRNMEAVGINVATANGPLRLFACYNRPQIPILE-EDLQTL 607
Query: 309 IRDLPKPIYVAGDFNAHHGHLG 244
D P AGDFNA H + G
Sbjct: 608 F-DGNTPTIAAGDFNAKHINWG 628
>UniRef50_UPI00006A09F9 Cluster: UPI00006A09F9 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A09F9 UniRef100 entry -
Xenopus tropicalis
Length = 317
Score = 33.9 bits (74), Expect = 2.3
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -1
Query: 486 GVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPS-NGSFRISKLRNI 310
GVAILI+ + K+ + QD + + ++ + +T+ VY P S SF S +
Sbjct: 5 GVAILIHKHVKFQLTPKHVDQDGRYIEITGTLQNQLVTLASVYAPNSRKASFFKSFFNKV 64
Query: 309 IRDLPKPIYVAGDFN 265
+ V+GDFN
Sbjct: 65 AEVQQGRVIVSGDFN 79
>UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|Rep:
Reverse transcriptase - Anopheles gambiae (African
malaria mosquito)
Length = 1049
Score = 33.9 bits (74), Expect = 2.3
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 256 WA--FGCMPTKSRGYQLYDLIDEFDLCVLNNGSFTTINYLNRNPSAIDXSFCSAPITPLC 83
WA +G T SRG + + + + N G+ T N N+ S +D +FCS ++
Sbjct: 122 WAVEWGSKRTNSRGDAVLESFARLGVTLGNAGTTPTFNR-NKRTSIVDITFCSTTLSERL 180
Query: 82 EWWVHD 65
W V D
Sbjct: 181 NWRVSD 186
>UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Rep:
Pol protein - Drosophila virilis (Fruit fly)
Length = 891
Score = 33.9 bits (74), Expect = 2.3
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = -1
Query: 489 GGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRNI 310
GG AILI+ + +Y + +Q + L I Y PP N + +
Sbjct: 66 GGAAILISNHIEYQALPGISLPQLQCAIVRLRTDLGGANIASCYWPP-NHAVLADDYVCL 124
Query: 309 IRDLPKPIYVAGDFNAHH---GHLGVCPR 232
L + + GD+NA H G++ CPR
Sbjct: 125 FNQLGENFLIGGDWNAKHRLWGNMRRCPR 153
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
n=80; Culicimorpha|Rep: Reverse transcriptase homolog
protein - Chironomus thummi
Length = 883
Score = 33.9 bits (74), Expect = 2.3
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = -1
Query: 513 LPNAQNEHGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSG-NHLTILCVYCPPSNGS 337
L GGVAI++ K+ + + + ++ + + ++++ + IL VY P +
Sbjct: 61 LDRVDRPKGGVAIIVKRNLKHQLQPSYNTKLMECIGIKVFINDTDSCHILSVYLPRGSKG 120
Query: 336 FRIS-KLR---NIIRDLPKPIYVAGDFNAHH 256
I LR N I +L Y+ GDFNA H
Sbjct: 121 GEIDLHLRDDINKITNLRGNYYICGDFNAKH 151
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 33.5 bits (73), Expect = 3.1
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -1
Query: 498 NEHGGVAILINP---YFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRI 328
N GGVA+ + +F +I+T + IQ ++ + L +YC PS
Sbjct: 64 NSVGGVAVFVRTTLRHFPQRVIET---RHIQLSSVKVATGLGDLQFSAIYCSPST-RIEE 119
Query: 327 SKLRNIIRDLPKPIYVAGDFNAHH 256
+IIR + V GD+NA H
Sbjct: 120 RHFTDIIRACGQRYLVGGDWNARH 143
>UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse
transcriptase homolog, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase homolog, partial - Nasonia vitripennis
Length = 1316
Score = 33.1 bits (72), Expect = 4.1
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Frame = -1
Query: 489 GGVAILINPYFKYNII---QTGFYQDIQTVALSLYVSGN-HLTILCVYCPPSNGSFRISK 322
GG ILI Y Y ++ T + ++++ A+ + + N L I+ VY N I +
Sbjct: 350 GGTGILIRKYIDYKVVHFTNTPHHNNLESTAIKIQCTDNTQLMIISVYAAGHNQHGFIDE 409
Query: 321 L-----RNIIRDLPKPIYVAGDFNAHHGHLG 244
L +N I+ +AGD NA H G
Sbjct: 410 LNHLFTQNNIQTNNTYFLLAGDINARVRHWG 440
>UniRef50_UPI0000D57919 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Tribolium castaneum|Rep: PREDICTED:
hypothetical protein, partial - Tribolium castaneum
Length = 263
Score = 33.1 bits (72), Expect = 4.1
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = -1
Query: 516 PLPNAQNEHGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPP-SNG 340
P P + +HG ++ I +Q VA +++++ ++ +C Y PP
Sbjct: 55 PSPTTRAKHGVTLLVSTSLASSQHILPPHLDHLQAVAATIHINNLNILFICYYNPPLETV 114
Query: 339 SFRISKLRNIIRDLPKPIYVAGDFNAHHGHLG 244
S ++ + R + GDFNA H G
Sbjct: 115 STQLLDYTSTFRH----AVILGDFNARHTDFG 142
>UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 988
Score = 32.3 bits (70), Expect = 7.1
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 229 SRGYQLYDLIDEFDLCVLNNGSFTTINYLNRNPSAIDXSFCSAPITPLCEWWVHDDSMGS 50
SRG + D L +LN G+ +T N S +D SFCS + W V D++
Sbjct: 145 SRGGVVMDAAAALGLVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNWRVCDETPSD 204
Query: 49 YH 44
++
Sbjct: 205 HN 206
>UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1092
Score = 32.3 bits (70), Expect = 7.1
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Frame = -1
Query: 504 AQNEHGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNH----LTILCVYCPPSNGS 337
A ++ GGVA ++N ++ ++ + IQ+ + L N + I VYCPPS S
Sbjct: 79 ASSKRGGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSL-S 137
Query: 336 FRISKLRNIIRDLPK------PIYVAGDFNAHHGHLG 244
+ +++ K + + GD+NA H G
Sbjct: 138 WSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWG 174
>UniRef50_A7SK58 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 266
Score = 32.3 bits (70), Expect = 7.1
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Frame = -1
Query: 513 LPNAQNEHGGVAILINPYFKYNIIQTGF-YQDIQTVALSLYVSGNHLTILCVY-CPPSNG 340
+P A GGVA+L FK + Y + + S L ++ VY PPS
Sbjct: 40 VPRAGARGGGVALLHKSQFKLTRLSVDANYTSFEFTDCIITHSSTRLRMIVVYRTPPSKK 99
Query: 339 S-FRISK--------LRNIIRDLPKPIYVAGDFNAH 259
+ F +SK L N+ + P+ +AGDFN H
Sbjct: 100 NRFTVSKFLDEFSSFLENVATTI-YPLIIAGDFNFH 134
>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 1119
Score = 31.9 bits (69), Expect = 9.4
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = -1
Query: 498 NEHGGVAILINPYFKYNIIQTGFY-QDIQTVALSLYVS-GNHLTILCVYCPPSNGSF--- 334
N+ GG+A+ I + I+ GF ++ A+++ + G L +C P ++ +
Sbjct: 46 NKGGGLAVCIKKGVIFEKIELGFKGNSLEVGAVTVDSNLGEILFTVCYRAPNTDNNISKV 105
Query: 333 RISKLRNIIRDL-PKPIYVAGDFNAHHGHLG 244
KL + ++ K +AGDFNAHH G
Sbjct: 106 EWCKLTDTVKQYGSKHFILAGDFNAHHSVWG 136
>UniRef50_A3XIT2 Cluster: Probable secreted protein; n=1;
Leeuwenhoekiella blandensis MED217|Rep: Probable
secreted protein - Leeuwenhoekiella blandensis MED217
Length = 269
Score = 31.9 bits (69), Expect = 9.4
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 348 SNGSFRISKLRNIIRDLPKPIYVAGDFNA 262
+N +I++L NI +L +P+ VAGDFNA
Sbjct: 171 TNRILQIAELLNITTNLNQPVLVAGDFNA 199
>UniRef50_A7NXH5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 560
Score = 31.9 bits (69), Expect = 9.4
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -1
Query: 456 KYNIIQTGFYQDI--QTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRNIIRDLPKPIY 283
K ++T DI + A + G+H C+ SNGS + L + + +P+PIY
Sbjct: 106 KLKTMETSSTLDILKEPAAQDVLGRGDHKGKFCIPSSSSNGSVKCQNLVEVGQKIPRPIY 165
Query: 282 VAG 274
+ G
Sbjct: 166 MNG 168
>UniRef50_O97333 Cluster: Putative uncharacterized protein
MAL3P8.17; n=2; Plasmodium|Rep: Putative uncharacterized
protein MAL3P8.17 - Plasmodium falciparum (isolate 3D7)
Length = 398
Score = 31.9 bits (69), Expect = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 492 HGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGN 382
H + +L P+ YN Q FY I+ + LY+ G+
Sbjct: 326 HFSIQVLFPPFSNYNFFQFPFYYSIEKILHDLYIYGH 362
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,616,094
Number of Sequences: 1657284
Number of extensions: 9822865
Number of successful extensions: 23436
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23426
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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