Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0702
(528 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50368| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_36426| Best HMM Match : Exo_endo_phos (HMM E-Value=0.016) 31 0.59
SB_29483| Best HMM Match : TerC (HMM E-Value=0.92) 31 0.59
SB_44234| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_15533| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_47011| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-14) 29 2.4
SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_6740| Best HMM Match : RVT_1 (HMM E-Value=4.5e-22) 29 2.4
SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43) 29 3.1
SB_47293| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4e-06) 29 3.1
SB_32387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_15964| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15) 29 3.1
SB_15148| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15) 29 3.1
SB_58941| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15) 29 3.1
SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13) 27 7.2
SB_35699| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_32204| Best HMM Match : wnt (HMM E-Value=8.2e-31) 27 7.2
SB_43869| Best HMM Match : ig (HMM E-Value=2.7e-06) 27 9.6
SB_24286| Best HMM Match : DUF1368 (HMM E-Value=4.1) 27 9.6
>SB_50368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 32.7 bits (71), Expect = 0.19
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -1
Query: 489 GGVAILINPYFKYNIIQ-TGFYQDIQTVALSLYVSGNHLTILCVYCPPS--NGSFRISKL 319
GGV +++ Y + T Y+ I+ +A+ + +T+LC Y PP G+++I L
Sbjct: 4 GGVIAIVSACLTYKPLNITKKYKTIEPIAIQTKIKSETVTMLCPYRPPKPLTGNYQI-LL 62
Query: 318 RNIIRDL 298
N + D+
Sbjct: 63 ENELSDI 69
>SB_36426| Best HMM Match : Exo_endo_phos (HMM E-Value=0.016)
Length = 276
Score = 31.1 bits (67), Expect = 0.59
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Frame = -1
Query: 489 GGVAILINPYFKYNIIQTGF-YQDIQTVALSLYVSGNHLTILCVYCPPSN--GSFRISKL 319
GGVA+L FK + Y + + S L ++ Y PP + F +SK
Sbjct: 36 GGVALLHKSQFKLTRLSVDVTYTSFKFTDFMITHSSTRLRMIVAYRPPPSKKNRFTVSKF 95
Query: 318 ----RNIIRDLPKPIY---VAGDFNAH 259
+ + +L IY VAGDFN H
Sbjct: 96 LDEFSSFLENLATTIYPLIVAGDFNFH 122
>SB_29483| Best HMM Match : TerC (HMM E-Value=0.92)
Length = 586
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 223 PDFSWAYTQMPMVSVEISSHIYWLRQISNYIT 318
PDF W T + V + H+YW+ YIT
Sbjct: 352 PDFMWNITWLDFCKVTLFQHMYWVTLAVVYIT 383
>SB_44234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 30.3 bits (65), Expect = 1.0
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Frame = -1
Query: 501 QNEHGGVAILINPYFKYNIIQT----GFYQDIQTVALSLYVSGNH---LTILCVYCPPSN 343
+ + GG+A+ I + + I QD + L + V+ H + + +Y PP N
Sbjct: 38 EKDGGGIALFIKDHIMFKIRTDLNAIKINQDTSEI-LFIEVTCRHSPNIIVGVIYRPPDN 96
Query: 342 GSFRISK-LRNIIRDLPK---PIYVAGDFN 265
+ + L NI++ L K P Y+ GDFN
Sbjct: 97 NYNQFEQSLNNILQQLDKEKKPCYLMGDFN 126
>SB_15533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Frame = -1
Query: 510 PNAQNEHGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFR 331
P + GG IL + Y + ++ L +L +Y PP + S
Sbjct: 162 PRSDRNGGGTGILARDSLVVKKARAAIYDSFEYSEWTIVSGSTRLRLLAIYRPPYSSSHP 221
Query: 330 ------ISKLRNIIRDL---PKPIYVAGDFNAH 259
IS+ + + +P+ + GDFN H
Sbjct: 222 LTVSMFISEFAEFLESVVMTTEPLVLTGDFNIH 254
>SB_47011| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-14)
Length = 440
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Frame = -1
Query: 489 GGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISK---- 322
GGV L+ + ++++ D + + + V + LT+L VY P S R
Sbjct: 105 GGVGFLLAEKWVESVVEVNRVSD-RICVIKINVGASILTVLSVYAPQSGLDDRSKDAFYD 163
Query: 321 -LRNIIRDLPKP--IYVAGDFNAHHG 253
L+ I + ++V GDFN H G
Sbjct: 164 LLQCTISKIADSELLFVCGDFNGHIG 189
>SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1163
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -1
Query: 462 YFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPS--NGSFRISKLRNIIRDL 298
Y + NI T Y+ I+ +A+ + +T+LC Y PP G+++I L N + D+
Sbjct: 10 YKRLNI--TKKYKTIEPIAIQTKIKSETVTMLCPYRPPKPLTGNYQI-LLENELSDI 63
>SB_6740| Best HMM Match : RVT_1 (HMM E-Value=4.5e-22)
Length = 884
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -1
Query: 462 YFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPS--NGSFRISKLRNIIRDL 298
Y + NI T Y+ I+ +A+ + +T+LC Y PP G+++I L N + D+
Sbjct: 10 YKRLNI--TKKYKTIEPIAIQTKIKSETVTMLCPYRPPKPLTGNYQI-LLENELSDI 63
>SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43)
Length = 1074
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -1
Query: 390 SGNHLTILCVYCPPSNGSFR-----ISKLRNIIRDLP-KPIYVAGDFNAHHG 253
SGN+LT++ VY P + KLR + P+ V GDFNA G
Sbjct: 206 SGNYLTLVSVYAPTMQRTSEEKEVFYEKLRCCLPSAQNNPLIVLGDFNARVG 257
>SB_47293| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4e-06)
Length = 744
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -1
Query: 390 SGNHLTILCVYCPPSNGSFR-----ISKLRNIIRDLP-KPIYVAGDFNAHHG 253
SGN+LT++ VY P + KLR + P+ V GDFNA G
Sbjct: 263 SGNYLTLVSVYAPTMQRTSEEKEVFYEKLRCCLPSAQNNPLIVLGDFNARVG 314
>SB_32387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -1
Query: 390 SGNHLTILCVYCPPSNGSFR-----ISKLRNIIRDLP-KPIYVAGDFNAHHG 253
SGN+LT++ VY P + KLR + P+ V GDFNA G
Sbjct: 61 SGNYLTLVSVYAPTMQRTSEEKEVFYEKLRCCLPSAQNNPLIVLGDFNARVG 112
>SB_15964| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15)
Length = 602
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -1
Query: 390 SGNHLTILCVYCPPSNGSFR-----ISKLRNIIRDLP-KPIYVAGDFNAHHG 253
SGN+LT++ VY P + KLR + P+ V GDFNA G
Sbjct: 146 SGNYLTLVSVYAPTMQRTSEEKEVFYEKLRCCLPSAQNNPLIVLGDFNARVG 197
>SB_15148| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15)
Length = 683
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -1
Query: 390 SGNHLTILCVYCPPSNGSFR-----ISKLRNIIRDLP-KPIYVAGDFNAHHG 253
SGN+LT++ VY P + KLR + P+ V GDFNA G
Sbjct: 146 SGNYLTLVSVYAPTMQRTSEEKEVFYEKLRCCLPSAQNNPLIVLGDFNARVG 197
>SB_58941| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15)
Length = 327
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -1
Query: 390 SGNHLTILCVYCPPSNGSFR-----ISKLRNIIRDLP-KPIYVAGDFNAHHG 253
SGN+LT++ VY P + KLR + P+ V GDFNA G
Sbjct: 117 SGNYLTLVSVYAPTMQRTSEEKEVFYEKLRCCLPSAQNNPLIVLGDFNARVG 168
>SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1322
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -1
Query: 507 NAQNEHGGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCP 352
N N G AIL+NP N+ QT + + +++ + L I +Y P
Sbjct: 134 NGTNSARGAAILLNPRLDNNLTQTKRDTTGRVINITIELEDQTLCITNIYAP 185
>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
Length = 1287
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 162 SLLLIILTEIHRLLMXVFVVLQSLHYANGGCMMILWGAIIFLRLLVF 22
SL++++L I+ L+ + V + Y N G + IIFL L++F
Sbjct: 506 SLIVLLLIVINFTLVFLIVRFREPDYLNLGLSCVFAITIIFLGLIIF 552
>SB_35699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -1
Query: 342 GSFRISKLRNIIRDLPKPIYVAGDFNAHHGHLGVCPR 232
G + ++ R + +LPKP++ F H H+ C +
Sbjct: 10 GPMKGTRFRPLSLELPKPLFPVAGFPIIHHHIEACKK 46
>SB_32204| Best HMM Match : wnt (HMM E-Value=8.2e-31)
Length = 731
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Frame = -1
Query: 489 GGVAILINPYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRNI 310
GGVAI+ Y+K ++ + +TV + + +Y PP N + ++L +
Sbjct: 243 GGVAIICRNYWKIKVLNVAASFESETVWCIITTPNSEFYAASIYHPP-NPVYDAAELLDF 301
Query: 309 IRD------LPKP---IYVAGDFN 265
+ D L P I +AGD N
Sbjct: 302 MSDTCDQILLENPNAKIIIAGDIN 325
>SB_43869| Best HMM Match : ig (HMM E-Value=2.7e-06)
Length = 399
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 87 NGVIGALQKLXSIADGFR 140
NG G QKL S+ADGFR
Sbjct: 40 NGKRGQYQKLFSLADGFR 57
>SB_24286| Best HMM Match : DUF1368 (HMM E-Value=4.1)
Length = 436
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 342 HSRADSIHIKSLSGYHLHITIMPQSECPGKILF 440
H +S+HI S L T+ PQ ECP +LF
Sbjct: 373 HEYNNSVHIFSAIERILQKTL-PQQECPATVLF 404
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,219,535
Number of Sequences: 59808
Number of extensions: 318897
Number of successful extensions: 4219
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4219
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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