Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0702
         (528 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131256-1|BAD18435.1|  177|Homo sapiens protein ( Homo sapiens ...    31   2.5  
AK131313-1|BAD18477.1|  244|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AB065543-1|BAC05788.1|  324|Homo sapiens seven transmembrane hel...    30   5.8  
AB065452-1|BAC05714.1|  324|Homo sapiens seven transmembrane hel...    30   5.8  

>AK131256-1|BAD18435.1|  177|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16187 fis, clone BRTHA2010033. ).
          Length = 177

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = -1

Query: 486 GVAILIN--PYFKYNIIQTGFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISK-LR 316
           G+AIL++  P FK   I+    ++   + +   +    LTIL +Y P +     I + LR
Sbjct: 16  GLAILVSDKPDFKPTKIKRD--KEGHYIVVKGSIHQEDLTILNIYAPNTGAPRSIKQVLR 73

Query: 315 NIIRDLPKPIYVAGDFN 265
           ++ RDL     + GDFN
Sbjct: 74  DLRRDLDSHTIIMGDFN 90


>AK131313-1|BAD18477.1|  244|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16301 fis, clone PLACE7000333. ).
          Length = 244

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
 Frame = -1

Query: 507 NAQNEHGGVAILINPYFKYNIIQTGFYQDI-QTVALSLYVSGNHLTILCVYCPPSNGSFR 331
           N + +  GVAIL++   K +   T    D    + +   +    LTIL +Y P +     
Sbjct: 66  NGKQKKAGVAILVSD--KTDFKPTKIKGDKGHYIMVKGSMQQEELTILNIYAPNTRAPRF 123

Query: 330 ISK-LRNIIRDLPKPIYVAGDFN 265
           I + LR++ RDL     + GDFN
Sbjct: 124 IKQVLRDLQRDLDSHTIIMGDFN 146


>AB065543-1|BAC05788.1|  324|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = -1

Query: 210 TI*LMNLIYVSLTMVASLLLIILTEIH-RLLMXVFVVLQSLHYANGGC 70
           T+ L+ L+  +LTMV ++LLIIL  I+  L + ++  L +L + +  C
Sbjct: 26  TLFLVFLLVYTLTMVGNILLIILVNINSSLQIPMYYFLSNLSFLDISC 73


>AB065452-1|BAC05714.1|  324|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = -1

Query: 210 TI*LMNLIYVSLTMVASLLLIILTEIH-RLLMXVFVVLQSLHYANGGC 70
           T+ L+ L+  +LTMV ++LLIIL  I+  L + ++  L +L + +  C
Sbjct: 26  TLFLVFLLVYTLTMVGNILLIILVNINSSLQIPMYYFLSNLSFLDISC 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,743,187
Number of Sequences: 237096
Number of extensions: 1513924
Number of successful extensions: 2598
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2598
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)