Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0702
         (528 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.9  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -3

Query: 262 SPWA-FGCMPTKSRGYQLYDL 203
           SP+  FGC+ T+   YQL DL
Sbjct: 270 SPYLRFGCLSTRLFYYQLTDL 290


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 65  IMHPPFA*WSDW 100
           I  PP A W+DW
Sbjct: 167 ISSPPLAGWNDW 178


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 65  IMHPPFA*WSDW 100
           I  PP A W+DW
Sbjct: 167 ISSPPLAGWNDW 178


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 65  IMHPPFA*WSDW 100
           I  PP A W+DW
Sbjct: 167 ISSPPLAGWNDW 178


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 409 HSLNVLVKSCLNNII 453
           H+LN+LV  C  +II
Sbjct: 321 HNLNILVDMCEQDII 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,400
Number of Sequences: 438
Number of extensions: 2935
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)