Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0695
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   5.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.5  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 174 VCSE*SVLFSIVQILSTIFHLLIM*QILLYVRCLLIY 64
           VC++  +L   V + +++F  L++  + L    LLIY
Sbjct: 194 VCADLCLLSECVDLFNSLFGFLVLLLVALTTLQLLIY 230


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 142 NGKQHRSFRTDELQSPDC*GC 204
           NGK    F  DE+    C GC
Sbjct: 84  NGKLSDKFLDDEMSKKSCQGC 104


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 142 NGKQHRSFRTDELQSPDC*GC 204
           NGK    F  DE+    C GC
Sbjct: 32  NGKLSDKFLDDEMSKKSCQGC 52


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 142 NGKQHRSFRTDELQSPDC*GC 204
           NGK    F  DE+    C GC
Sbjct: 215 NGKLSDKFLDDEMSKKSCQGC 235


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 126 CLKFVQWKTTQIIQNRRTTV 185
           CLK + W+    +  RRT +
Sbjct: 531 CLKSIAWRAFLAVLKRRTEI 550


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 458 RYFCKSSRFNLS*VRSSSNCFS 393
           R +C SS+  LS   S++NC++
Sbjct: 233 RSWCSSSQPVLSTTNSTTNCYN 254


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 316 QELYDCTRGTRVFSTRCR 263
           QELYDC  G  VF+ + R
Sbjct: 53  QELYDCPNGL-VFAGKNR 69


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 587 LAVSVFYRGKE 619
           +AVSVFYR K+
Sbjct: 46  VAVSVFYRAKD 56


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 587 LAVSVFYRGKE 619
           +AVSVFYR K+
Sbjct: 46  VAVSVFYRAKD 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,584
Number of Sequences: 336
Number of extensions: 3233
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)