Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0695
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AF047659-7|AAY86256.1|  302|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
            K08C7.3b protein.
          Length = 3672

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +2

Query: 119  KIVLKICTMENNTDHSEQTNYSPLTVEDVDVDFLPIVYDIIRSVEKIFTTTRRKYASPTS 298
            +I L  C++ ++ + S  T  +P   +D DV  LPI  +   +     TTT      P  
Sbjct: 3229 EISLNGCSLSDDENISTTTTAAPKPTDDSDVAVLPIDEEEESTTTTTTTTTEEPTEEPAE 3288

Query: 299  A 301
            A
Sbjct: 3289 A 3289


>AF047659-7|AAY86256.1|  302|Caenorhabditis elegans Hypothetical
           protein K07H8.11 protein.
          Length = 302

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 256 DFHDNASKIRESHECSHRVLELQKRLEIAKAQIRRLPGIE---FNKHDQLKQFELLRTQL 426
           DF  N +KI         + +  K++   K  ++  P I+   FN +D L   ELLR   
Sbjct: 96  DFFQNRTKISRISVTLPSLTDDLKKITKRKNSVKTKPAIDNFRFNSYDSLLYNELLRLST 155

Query: 427 RLKREL 444
            + ++L
Sbjct: 156 GIPKQL 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,472,753
Number of Sequences: 27780
Number of extensions: 287714
Number of successful extensions: 841
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)