Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0694
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
 Frame = +2

Query: 221 HKYEEFQRRS---LSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVD 391
           HK +E  ++    +    + V++K    E      E+ K +E     D +  + E    D
Sbjct: 194 HKIKEIVKKHSQFIGYPIKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGED 253

Query: 392 ITEDKNDSKTKKRGQNKSRPKIFKDGKESKP 484
             ED      KK+   K +    ++  ++KP
Sbjct: 254 EDEDTKKEDKKKKKTIKEKYTEDEELNKTKP 284


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 504 TSRTVGHGLLSLPSLNIFGRDLFWP 430
           +SR+V     S+P+   +G DL++P
Sbjct: 97  SSRSVMTSCSSVPTTASYGSDLYFP 121


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 127 SYFYNIISTTVFMIM 83
           S++YNII    FM++
Sbjct: 946 SFYYNIIPILFFMLV 960


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 127 SYFYNIISTTVFMIM 83
           S++YNII    FM++
Sbjct: 946 SFYYNIIPILFFMLV 960


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 127 SYFYNIISTTVFMIM 83
           S++YNII    FM++
Sbjct: 946 SFYYNIIPILFFMLV 960


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 127 SYFYNIISTTVFMIM 83
           S++YNII    FM++
Sbjct: 946 SFYYNIIPILFFMLV 960


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,082
Number of Sequences: 336
Number of extensions: 2298
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)