Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0694
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 34 0.081
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 33 0.11
U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical p... 33 0.14
U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical p... 33 0.14
U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical pr... 33 0.14
U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical pr... 33 0.14
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 33 0.19
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 33 0.19
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 33 0.19
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 32 0.33
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 32 0.33
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 32 0.33
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 31 0.43
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 31 0.57
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 30 1.0
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 30 1.0
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 30 1.0
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 30 1.3
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 30 1.3
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 30 1.3
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL110477-9|CAB54333.1| 540|Caenorhabditis elegans Hypothetical ... 29 1.7
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 29 2.3
AF067624-6|AAP68904.1| 264|Caenorhabditis elegans Hypothetical ... 29 2.3
AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical ... 29 2.3
Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical p... 29 3.1
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 4.0
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 28 4.0
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 28 4.0
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 5.3
AF022975-9|AAB70669.1| 344|Caenorhabditis elegans Hypothetical ... 28 5.3
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 5.3
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical pr... 27 7.0
U10414-12|AAA19079.3| 497|Caenorhabditis elegans Nematode astac... 27 7.0
AJ561217-1|CAD99197.1| 210|Caenorhabditis elegans NAS-28 protei... 27 7.0
AC025726-29|AAK73931.2| 1098|Caenorhabditis elegans Hypothetical... 27 7.0
Z92786-3|CAB63202.1| 488|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical pr... 27 9.3
U23179-10|AAN63446.1| 329|Caenorhabditis elegans Hypothetical p... 27 9.3
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 9.3
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 33.9 bits (74), Expect = 0.081
Identities = 20/88 (22%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 227 YEEFQRRSLSIKDEYV-LQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITED 403
+E+ ++ + S D+ + L+K E+SY EK +LD+ FD N + ++ + ++
Sbjct: 512 FEDLKKLANSGTDKLIELKKRLESSEESYAKEKDELDKLKPEFDSWNDKLKQLSTELPTL 571
Query: 404 KNDSKTKKRGQNKSRPKIFKDGKESKPC 487
+N ++ K + K+R ++ +++ C
Sbjct: 572 RNTARQKNQDLAKTRDRLETLRQQNSSC 599
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +2
Query: 218 THKYEEFQRRSLSIKDEYVLQKSNIIEEKSY----NLEKRKLDESSASFDDNNLEFEKTT 385
T EEF R L +E ++K I E+K+Y N E++K D S+S ++N + ++T
Sbjct: 1457 TEDVEEFHRSYLLKNEECEVEKDRISEKKNYKNKWNREEKKSDYESSSDYESNYDEKETE 1516
Query: 386 VDITE 400
++ +
Sbjct: 1517 KELVK 1521
>U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical
protein F55C12.1a protein.
Length = 454
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 212 SITHKYEEFQRRSLSIKDEYVLQKS--NIIEEKSYNLEKRKLDESSASFDDNNLEFEKTT 385
S T +Y E + R++S+ DE K+ ++++E+ +NLE++ D + E + T
Sbjct: 58 SFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTDNEDRFKQLLSDEKARGT 117
Query: 386 VDITEDKNDSKTKKRGQNKSRPKIFKD 466
++ K + + + N + KD
Sbjct: 118 ESMSRLKREKELETESWNLKYQMLEKD 144
>U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical
protein F55C12.1c protein.
Length = 416
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 212 SITHKYEEFQRRSLSIKDEYVLQKS--NIIEEKSYNLEKRKLDESSASFDDNNLEFEKTT 385
S T +Y E + R++S+ DE K+ ++++E+ +NLE++ D + E + T
Sbjct: 20 SFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTDNEDRFKQLLSDEKARGT 79
Query: 386 VDITEDKNDSKTKKRGQNKSRPKIFKD 466
++ K + + + N + KD
Sbjct: 80 ESMSRLKREKELETESWNLKYQMLEKD 106
>U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical
protein F55C12.1b protein.
Length = 471
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 212 SITHKYEEFQRRSLSIKDEYVLQKS--NIIEEKSYNLEKRKLDESSASFDDNNLEFEKTT 385
S T +Y E + R++S+ DE K+ ++++E+ +NLE++ D + E + T
Sbjct: 75 SFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTDNEDRFKQLLSDEKARGT 134
Query: 386 VDITEDKNDSKTKKRGQNKSRPKIFKD 466
++ K + + + N + KD
Sbjct: 135 ESMSRLKREKELETESWNLKYQMLEKD 161
>U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical
protein F55C12.1d protein.
Length = 468
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 212 SITHKYEEFQRRSLSIKDEYVLQKS--NIIEEKSYNLEKRKLDESSASFDDNNLEFEKTT 385
S T +Y E + R++S+ DE K+ ++++E+ +NLE++ D + E + T
Sbjct: 72 SFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTDNEDRFKQLLSDEKARGT 131
Query: 386 VDITEDKNDSKTKKRGQNKSRPKIFKD 466
++ K + + + N + KD
Sbjct: 132 ESMSRLKREKELETESWNLKYQMLEKD 158
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 218 THKYEEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDIT 397
T EEF R L +E ++ + E+K+Y RK DE ++ FE+T
Sbjct: 1461 TKDIEEFHRSYLLKNEECEAEEERLSEKKNY----RKYDE--RKYESEEYSFEETYDYEQ 1514
Query: 398 EDKNDSKTKKRGQNKS 445
E+ N + +R Q KS
Sbjct: 1515 ENTNKKQKNQRSQKKS 1530
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +2
Query: 224 KYEEFQRRSLS---IKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDI 394
K EE +++ + I +E L+K + EEK + EK++ + +++ + EK
Sbjct: 99 KMEEREKQRIERERILEEKRLEKDKLAEEKRLDKEKKEKERLDKKLEEDKKKEEKRKEAE 158
Query: 395 TEDKND--SKTKKRGQNKSRPKIFKDGKESK 481
+ K D K KK + R K ++ KE+K
Sbjct: 159 EKKKKDEEEKMKKDEERNKRKKEEEEKKEAK 189
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 296 EEKSYNLEKRKLD--ESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKIFKDG 469
E+KS +++K D E D+ E EK D +DK ++K+K + NKS+ K K
Sbjct: 122 EKKSDKKDEKKDDKKEKDEEKKDDKKEDEKKDDDKKDDKKEAKSKSKKSNKSK-KSKKSK 180
Query: 470 KESK 481
+E K
Sbjct: 181 REKK 184
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 317 EKRKLDESSASFDDNNLEFEKTTVDITED--KNDSKTKKRGQNKSRPKIFKDGKESK 481
+++K D+ DD + E+ D ED K+D K + + KS+ K K+SK
Sbjct: 121 DEKKSDKKDEKKDDKKEKDEEKKDDKKEDEKKDDDKKDDKKEAKSKSKKSNKSKKSK 177
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 299 EKSYNLEKRKLDESSASFDDNNLEFEKTTVDITED-KNDSKTKKRGQNKSRPKI 457
EKS N E LDESS++ + + T+ ED K + KT + +NK R K+
Sbjct: 415 EKSENQEAWDLDESSSTKSPIDCKKCSQTLQTIEDVKKELKTSQNKENKMRKKV 468
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 218 THKYEEFQRRSLSIKDEYVLQKSNIIEEKSY----NLEKRKLDESSASFDDNNLEFEKT 382
T EEF R L +E ++ I E+K+Y N E++K D S+S +NN + ++T
Sbjct: 1457 TEDVEEFHRSYLLKNEECEVENDRISEKKNYRNKWNREEKKSDYVSSSDYENNYDEKET 1515
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/84 (21%), Positives = 42/84 (50%)
Frame = +2
Query: 230 EEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDKN 409
EE+++R ++ E +++ N EK N + K ++ ++ E ++ + + N
Sbjct: 210 EEYEKRKEILRREEEIKQQNQEREKQINEDFEKRNQEKLKREE---EIKQQNQEREKQIN 266
Query: 410 DSKTKKRGQNKSRPKIFKDGKESK 481
D K++ + R K+F+ K++K
Sbjct: 267 DDFEKRKLEKLQREKLFEKNKQAK 290
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 31.5 bits (68), Expect = 0.43
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +2
Query: 218 THKYEEFQRRSLSIKDEYVLQKSNIIEEKSY----NLEKRKLDESSASFDDNNLEFEKTT 385
T EEF R L +E ++ I E+K+Y N E++K D S+S ++N + ++T
Sbjct: 1457 TEDVEEFHRSYLLKNEECEVENDRISEKKNYRNKWNREEKKSDYESSSDYESNYDEKETE 1516
Query: 386 VDITE 400
++ +
Sbjct: 1517 KELVK 1521
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 31.1 bits (67), Expect = 0.57
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = +2
Query: 224 KYEEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITED 403
K + Q R ++E +K ++K +K++ D+ D + EK D ED
Sbjct: 119 KKKRKQMRDKKKQEEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEED 178
Query: 404 KNDSKTKKRGQNKSRPKIFKDGKE 475
K K KK+ N K KD K+
Sbjct: 179 KKKDKKKKKDDNDEEEK-EKDKKK 201
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 230 EEFQRRSLSIKDEYVL-QKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDK 406
EE +++ KD+ +K +E+ +K+K DE + DD++ E +K +D
Sbjct: 133 EEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKN---DDDDEEDKKKDKKKKKDD 189
Query: 407 NDSKTKKRGQNKSRPKIFKDGKESK 481
ND + K++ + K K D E +
Sbjct: 190 NDEEEKEKDKKKKDKKKDDDDDEDE 214
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +2
Query: 278 QKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKI 457
+K++ EE +K+K D+ +DN + +K D +D+++ K K + + K + K
Sbjct: 266 KKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEKDK-KKKDKKKD 324
Query: 458 FKDGKESK 481
D + K
Sbjct: 325 DDDDDDEK 332
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +2
Query: 278 QKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKI 457
+K N +EK EK K D+ S +D EKT + E KN+ K K++ + K K
Sbjct: 100 KKENENDEKK---EKSKDDKKEESKEDKK---EKTKTEDNEGKNEEKKKEKKEEKKDEKE 153
Query: 458 FKDGKE 475
K+ E
Sbjct: 154 KKEKTE 159
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = +2
Query: 218 THKYEEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDIT 397
T EEF R L +E ++ + E+K+Y +R ++S + ++E+ +
Sbjct: 1459 TEDIEEFHRSYLLRNEECEAEEERLSEKKNYRKYERDEEQSDEYSSEETYDYEQENTKKS 1518
Query: 398 EDKNDSKTKKRGQNKSRPKIF 460
+ S+ K K++ K F
Sbjct: 1519 QKNQRSQKKSDLVEKTQIKEF 1539
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = +2
Query: 218 THKYEEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDIT 397
T EEF R L +E ++ + E+K+Y +R ++S + ++E+ +
Sbjct: 1459 TEDIEEFHRSYLLKNEECEAEEERLSEKKNYRKYERDEEQSDEYSSEETYDYEQENTKKS 1518
Query: 398 EDKNDSKTKKRGQNKSRPKIF 460
+ S+ K K++ K F
Sbjct: 1519 QKNQRSQKKSDLVEKTQIKEF 1539
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 218 THKYEEFQRRSLSIKDEYVLQKSNIIEEKSY----NLEKRKLDESSASFDDNNLEFEKTT 385
T EEF R L +E + I E+K+Y N E++K D S+S ++N + ++T
Sbjct: 1457 TEDVEEFHRSYLLKNEECEFEFDRISEKKNYRNKWNREEKKSDYESSSDYESNYDEKETE 1516
Query: 386 VDITE 400
++ +
Sbjct: 1517 EELVK 1521
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +2
Query: 260 KDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQN 439
K+E ++ EEK + EK+K +E E +K +V T++ + K+ +
Sbjct: 70 KEEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQETKSERKDKKDER 129
Query: 440 KSRPKIFKDGKESK 481
K K ++ ++SK
Sbjct: 130 KEDDKKEENKEKSK 143
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 317 EKRKLDESSASFDDNNLEFEK--TTVDITEDKNDSKTKKRGQNKS 445
+KRK + S + DDN+L+ EK D ++K K K++ Q KS
Sbjct: 1032 KKRKHNRSESDSDDNSLKKEKKHRKEDHPKEKEKEKKKEKEQEKS 1076
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +2
Query: 251 LSIKDEYVLQKSNIIEEKSYN--LEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTK 424
+S+K++ + KS + K+ EK +D + + EK D+ + + SK+
Sbjct: 608 ISLKEKATILKSTMFNAKANQEIREKNPIDYIKEFWTNPGPSIEKLVSDLEKLEQSSKSY 667
Query: 425 KRGQNKSRPKIFKDGKESKPCPTV 496
++ + K+F+DG + P V
Sbjct: 668 RKADLLTIRKVFEDGSKIVGIPEV 691
>AL110477-9|CAB54333.1| 540|Caenorhabditis elegans Hypothetical
protein Y113G7B.14 protein.
Length = 540
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +2
Query: 296 EEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDK----NDSKTKKRGQNKSRPKIFK 463
EEKS+N+ ++ + + + + E KTT + ++K + T + K+ K+ K
Sbjct: 348 EEKSFNMAEKNFETACSDDEKQAFESAKTTFETAKEKFTKATEEYTFSKETLKNVAKLAK 407
Query: 464 DGKESK--PCPTVLDVELQNN--*KFVNII 541
+G+ K P + D++ N K +NII
Sbjct: 408 NGQFPKIGQFPEIFDIKHPNARITKTINII 437
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 311 NLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKIFKDGKE 475
N + ES+ S+ N +EF TTVD + + +K + + K+ K GK+
Sbjct: 316 NSRTLRATESNVSWTSNIVEFTLTTVDHLKLFKSFEMQKESKKSANSKVKKVGKD 370
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 224 KYEEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTT---VDI 394
K E QR+S E ++E + ++K+ LDE +A F+D N + +K + D
Sbjct: 147 KIVELQRKSCDQNKEKFTALELQLQETNERMQKQ-LDELNAKFEDVNRKLQKASDCNAD- 204
Query: 395 TEDKNDSKTKKRGQNKS 445
TE +N+ G + S
Sbjct: 205 TEKENEEGVSDNGTDDS 221
>AF067624-6|AAP68904.1| 264|Caenorhabditis elegans Hypothetical
protein M01B12.5b protein.
Length = 264
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 335 ESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKIFKD 466
++ + +DD+ +EF + T D T+ N ++ G N +R ++ D
Sbjct: 52 DTDSDYDDDIVEFAEATGDFTKKLNAARLNTIGPNAARNRLTVD 95
>AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical
protein M01B12.5a protein.
Length = 506
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 335 ESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKIFKD 466
++ + +DD+ +EF + T D T+ N ++ G N +R ++ D
Sbjct: 52 DTDSDYDDDIVEFAEATGDFTKKLNAARLNTIGPNAARNRLTVD 95
>Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical
protein Y57G11C.5 protein.
Length = 512
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 230 EEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDIT-EDK 406
++ RR +D + ++ N + L++S+ + ++L + TV E K
Sbjct: 431 QKLMRRVRKSEDREKEKDKKRARKEQKNQKVENLEQSTTASSTSSLSSPEITVSKKPEIK 490
Query: 407 NDSKTKKRGQNKSRPKIFK 463
ND K+K +G +IFK
Sbjct: 491 NDDKSKSKGWRHLANRIFK 509
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 236 FQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLE-FEKTTVDITEDKND 412
FQ +K VL KS I + LE +DE + N + FE+ ++ + K D
Sbjct: 264 FQEPDKDVKGRTVLDKSAAIFKLV--LEMNGVDECTVMIFFNKQDRFEEICREMMQ-KED 320
Query: 413 SKTKKRGQNKSRPKIFKDGKESKP 484
K + PK+ K+GK+ KP
Sbjct: 321 GKRQLEKVLGIPPKVQKEGKKGKP 344
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 4.0
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +2
Query: 215 ITHKYEEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDI 394
I HK E ++ K+E ++ EE E K DE ++ E +K V+
Sbjct: 275 INHK-EVAEKNEEDKKEEEPKKEEEKKEEVEKKEEDEKKDEEPKKEEEKKEEEQKEEVEK 333
Query: 395 TED--KNDSKTKKRGQNKSRPKIFKDGKESK 481
E+ K D + KK + K + +D E K
Sbjct: 334 KEEEEKKDEEPKKEEEKKEEEEKKEDEVEEK 364
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +2
Query: 224 KYEEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITED 403
K EE +++ K E ++ EE E+ K DE ++ E EK ED
Sbjct: 305 KKEEDEKKDEEPKKEEEKKEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKK-----ED 359
Query: 404 KNDSKTKKRGQNKSRPKIFKDGKESK 481
+ + K++K + + PK KD +E+K
Sbjct: 360 EVEEKSEKVEEKELEPK--KDEEETK 383
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 311 NLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPK 454
N + ++ FDDN L+F + ++ + + +TKK + K++PK
Sbjct: 9 NWQTCDVEAMDGDFDDNMLQFLGSFEEVLPEGVEVETKKGMKKKNKPK 56
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +2
Query: 278 QKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKI 457
+K + E+ E +K D+ S + DD + E ++ D E+K + K +++ + K K
Sbjct: 134 KKEDEKEKDDDKKEDKKDDKKSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKK 193
Query: 458 FKDGKESK 481
+ +E K
Sbjct: 194 EEKKEEEK 201
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 296 EEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKIFKDGKE 475
EEK + EK+K +E E +K +V T++ + K+ + K K + ++
Sbjct: 76 EEKKADDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEK 135
Query: 476 SK 481
SK
Sbjct: 136 SK 137
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 27.9 bits (59), Expect = 5.3
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 218 THKYEEFQRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDIT 397
T K E +RR+ ++E +K ++K EK+K D D E +K D
Sbjct: 389 TLKMERDERRTKRKEEEEKKKKDAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAED-- 446
Query: 398 EDKNDSKTKKRGQNKSRPKIFKDGKESK 481
E K D+ +K+ ++ K KD +E K
Sbjct: 447 EKKKDAGDEKKKKDAGEKK-KKDAEEKK 473
>Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical
protein R04D3.2 protein.
Length = 406
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 299 EKSYNLEKRKLDES-SASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKI 457
E Y E+R+ ES S NN T ED++D++ + +++S+P++
Sbjct: 271 ENDYEDEEREEKESRQKSRRSNNSRSHSTREHFQEDESDNENEDNEEDESKPRM 324
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 239 QRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSK 418
+R S K +K E + E+RK+ +S + + + + +T+ + ED+ SK
Sbjct: 135 EREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSK 194
Query: 419 TKKRGQNK 442
K+G K
Sbjct: 195 KSKKGLKK 202
>AF022975-9|AAB70669.1| 344|Caenorhabditis elegans Hypothetical
protein K09C6.2 protein.
Length = 344
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 230 EEFQRRSLSIKDEYVLQKSNII-EEKSYNLEKRKLDESSASFDDN-NLEFEKTTVDITED 403
E+ + L ++E L + + E+K Y K D++S+S DD N + E ++ D
Sbjct: 192 EKTDKEKLDAEEEKELAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLD 251
Query: 404 KNDSKTKKRG 433
K D + ++G
Sbjct: 252 KIDKQKDRKG 261
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 239 QRRSLSIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSK 418
+R S K +K E + E+RK+ +S + + + + +T+ + ED+ SK
Sbjct: 135 EREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSK 194
Query: 419 TKKRGQNK 442
K+G K
Sbjct: 195 KSKKGLKK 202
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 260 KDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQN 439
KDE K + ++ EK+ ++ D+ E +K E K+D K + +
Sbjct: 113 KDEKKDDKKDDKKDGKKEDEKKDDEKKDEEKKDDKKEDDKKGDKKDEKKDDEKKDDKKEA 172
Query: 440 KSRPKIFKDGKESK 481
KS+ K K K+SK
Sbjct: 173 KSKSKKSKKSKKSK 186
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical protein
F57C7.1a protein.
Length = 1209
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 320 KRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTVL 499
KR L ESS+S D N + + D +E K +K + Q K K K+ P ++L
Sbjct: 1060 KRTLSESSSSSDSNGSSSDSSDSD-SEPKPQAKKPEPPQKKVAKKPAPQQKKKAPL-SIL 1117
Query: 500 D 502
D
Sbjct: 1118 D 1118
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 320 KRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKR 430
++ L+ S +D NLE E+ ++ E+ D K KK+
Sbjct: 1248 EKVLNNRILSLEDQNLELEERLQEMEEELLDEKNKKK 1284
>Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical
protein ZK1307.7 protein.
Length = 436
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -2
Query: 395 LCLQ*FSQILNCYHQMKRNSHLVYVFQDCMIFLQLCWIFVTHIHLLL 255
+C F ++ C + R+SHLVY ++FL + IF++ ++LL
Sbjct: 57 VCFNTFLFVVLCRNPRHRHSHLVY-----LMFLSVADIFLSAAYILL 98
>U10414-12|AAA19079.3| 497|Caenorhabditis elegans Nematode astacin
protease protein28 protein.
Length = 497
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 215 ITHKYEEFQRRSLSIKDEYV-LQKSNIIEEKSYNLEKRKLDES 340
+ H + ++S + +D YV + SNII ++YN +K +D++
Sbjct: 216 LMHAIGFWHQQSRADRDNYVYVDFSNIIPSQAYNFQKMAVDQA 258
>AJ561217-1|CAD99197.1| 210|Caenorhabditis elegans NAS-28 protein
protein.
Length = 210
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 215 ITHKYEEFQRRSLSIKDEYV-LQKSNIIEEKSYNLEKRKLDES 340
+ H + ++S + +D YV + SNII ++YN +K +D++
Sbjct: 22 LMHAIGFWHQQSRADRDNYVYVDFSNIIPSQAYNFQKMAVDQA 64
>AC025726-29|AAK73931.2| 1098|Caenorhabditis elegans Hypothetical
protein Y71G12B.5 protein.
Length = 1098
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 359 NNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKI 457
N E KT + + DKN + T K QNK + +I
Sbjct: 286 NKAEAVKTIMSLPADKNATFTLKTSQNKGKDQI 318
>Z92786-3|CAB63202.1| 488|Caenorhabditis elegans Hypothetical
protein F47H4.6 protein.
Length = 488
Score = 27.1 bits (57), Expect = 9.3
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 365 LEFEKTTVDITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTVLDVELQNN*KFVNIII 544
++F++ V E KNDS + NK + KDG SK V +QN + +
Sbjct: 249 VQFDEKEVTYHEKKNDSTS----HNKDQGMYIKDGSHSKMALHDWSVVMQNQKLKLRELT 304
Query: 545 VSLSM 559
++L+M
Sbjct: 305 LTLAM 309
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 230 EEFQRRSLSIKDEYVLQKS-NIIEEKSYNLEKRKLDESSASFDDNNLEFEKTTVDITEDK 406
+E + + SIKDE + S N +E+ + ++ + S S DD E E+ + E +
Sbjct: 467 KEEKEKEDSIKDEVAEENSDNDNDEEKEKVSEKSISPSPPS-DDEEKEKEREKERLIEKE 525
Query: 407 NDSKTKKRGQNKSRPKIFKDGKESK 481
+ ++R K + K K K
Sbjct: 526 RRERDQRRRDKKREKRERKKAKLGK 550
>Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical
protein C07A9.4 protein.
Length = 590
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 308 MIFLQLCWIFVTHIHLLLTNSCVGILHIYVLCSE*LLLITH 186
+ FL C+++ H+ + + + +G+ IYV C+ L I H
Sbjct: 215 LAFLAFCFVYYDHVEIWMPITFLGVYLIYV-CTVILSQILH 254
>U23179-10|AAN63446.1| 329|Caenorhabditis elegans Hypothetical
protein C27D6.4b protein.
Length = 329
Score = 27.1 bits (57), Expect = 9.3
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 284 SNIIEEKSYNLEKRKL-DESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKIF 460
S++ +EK L+ KL D F D+N + D T D + S + + S P F
Sbjct: 18 SSVHDEKD-TLDILKLFDNDIDGFSDDNFRIKMEPNDETSDYHGSSSGSPSSSLSSPNEF 76
Query: 461 KD 466
KD
Sbjct: 77 KD 78
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 320 KRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKS 445
KR DE+ ++ D + EK D+T K +K KK+ + KS
Sbjct: 2990 KRVGDEARSAAHDQIVALEKEAEDVTA-KESAKKKKKDKKKS 3030
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 320 KRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKS 445
KR DE+ ++ D + EK D+T K +K KK+ + KS
Sbjct: 3893 KRVGDEARSAAHDQIVALEKEAEDVTA-KESAKKKKKDKKKS 3933
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 320 KRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKS 445
KR DE+ ++ D + EK D+T K +K KK+ + KS
Sbjct: 4847 KRVGDEARSAAHDQIVALEKEAEDVTA-KESAKKKKKDKKKS 4887
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 320 KRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKS 445
KR DE+ ++ D + EK D+T K +K KK+ + KS
Sbjct: 5750 KRVGDEARSAAHDQIVALEKEAEDVTA-KESAKKKKKDKKKS 5790
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 320 KRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKS 445
KR DE+ ++ D + EK D+T K +K KK+ + KS
Sbjct: 6653 KRVGDEARSAAHDQIVALEKEAEDVTA-KESAKKKKKDKKKS 6693
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 320 KRKLDESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKS 445
KR DE+ ++ D + EK D+T K +K KK+ + KS
Sbjct: 7556 KRVGDEARSAAHDQIVALEKEAEDVTA-KESAKKKKKDKKKS 7596
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 332 DESSASFDDNNLEFEKTTVDITEDKNDSKTKKRGQNKSRPKIFKDGKESK 481
D+SS S + +FE+ + SK K+ + K + K K KE +
Sbjct: 275 DDSSTSSESEESDFEQKKKKKVKKSKKSKKDKKKEKKEKKKSKKANKEKE 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,599,012
Number of Sequences: 27780
Number of extensions: 192264
Number of successful extensions: 1047
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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