Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0693
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.6  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -2

Query: 571 IRLLLSIFN-NSGNPCLVLAVITAKLSSQFLNTCI 470
           +++L+SI   N+GN  L   V ++KL +  +++C+
Sbjct: 96  LKVLISIGGWNAGNAILNGIVASSKLRASLISSCL 130


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 555 DRRSLIASLKNLHTD-SYLVSAAMFVLENM 641
           D  ++ ASLKNL+TD  +L     F+ + +
Sbjct: 212 DLEAIYASLKNLNTDHGFLDGQKPFIFQEV 241


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 555 DRRSLIASLKNLHTD-SYLVSAAMFVLENM 641
           D  ++  SLKNL+TD  +L+    F+ + +
Sbjct: 213 DLEAIYGSLKNLNTDHGFLLGQKPFIFQEV 242


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 598 SVCKFFKLAIRLLLSIFNNSGNPCLVL 518
           + CKFF +   LLLSI   S +   ++
Sbjct: 408 TACKFFSIDNALLLSICGASSSYLFIM 434


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,358
Number of Sequences: 336
Number of extensions: 3741
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)