Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0693
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0216 - 2329413-2330419,2331382-2331537,2332363-2332897,233...    32   0.42 
09_03_0169 - 13010909-13012033                                         29   5.2  
06_02_0065 - 11073816-11074384,11074605-11075160                       28   6.9  
09_03_0170 - 13035371-13036504                                         28   9.1  
03_05_1044 + 29908348-29908503,29909495-29909626,29910049-299103...    28   9.1  
02_05_1340 + 35797923-35799881                                         28   9.1  

>10_01_0216 -
           2329413-2330419,2331382-2331537,2332363-2332897,
           2333026-2333514
          Length = 728

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 226 AAFIANEFVREVLVLLLKSASN-PPTSLICAAWRAVLLSP 342
           +A   ++ +RE+LV L  S S+ P  SL+C  WR V+  P
Sbjct: 17  SALDGDDILREILVRLPTSPSSLPRASLVCKQWRRVVSDP 56


>09_03_0169 - 13010909-13012033
          Length = 374

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +1

Query: 256 EVLVLLLKS---ASNPPTSLICAAWR-AVLLSPFQRA 354
           +VLVL+L S   +S+P  +L+C  WR A  L PF  A
Sbjct: 16  DVLVLILGSLRWSSHPSVALVCRHWRSAASLCPFYPA 52


>06_02_0065 - 11073816-11074384,11074605-11075160
          Length = 374

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 226 AAFIANEFVREVLVLL-LKSASNPPTSLICAAWRAVLLSP 342
           A+ + NE V E+L+ L +K+ S   +  +C AWRA + +P
Sbjct: 44  ASSLPNELVYEILLRLPVKTLSRSKS--VCRAWRATISNP 81


>09_03_0170 - 13035371-13036504
          Length = 377

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +1

Query: 256 EVLVLLLKS---ASNPPTSLICAAWR-AVLLSPFQRA 354
           +VLVL+L S   +S+P  +L+C  WR A  L PF  A
Sbjct: 20  DVLVLILGSLRWSSHPIVALVCRHWRYAASLCPFYPA 56


>03_05_1044 +
           29908348-29908503,29909495-29909626,29910049-29910364,
           29910447-29910510,29910614-29910727,29910806-29910968,
           29911166-29911316,29911403-29911986,29912313-29912542,
           29912791-29913045,29913293-29913590
          Length = 820

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -1

Query: 497 KQPIPKHLHLKQCFQISIKSSSLITGHTGNKFTAF 393
           K  +PK L   QC   SI SSSLI      K  AF
Sbjct: 528 KLELPKGLLNSQCMLFSIDSSSLILAGRDGKIYAF 562


>02_05_1340 + 35797923-35799881
          Length = 652

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -3

Query: 231 SGIISEITFGVPYLVANCVVILRASVFPLAA 139
           SG  S + + +P LVA+  V++ ASV P+AA
Sbjct: 497 SGRRSLLLWTIPLLVASLAVLVAASVAPMAA 527


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,598,730
Number of Sequences: 37544
Number of extensions: 335391
Number of successful extensions: 789
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)