Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0693
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    26   1.4  
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    24   5.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.6  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 334 LSPFQRADYPLTETQKERCLN 396
           L P +   YP +  QKE C+N
Sbjct: 117 LKPIETCQYPFSAKQKEVCIN 137


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 418 CPVIKDDDLIEIWKHCFRC 474
           C  + D  LIE+ +HC  C
Sbjct: 41  CSSLSDYGLIELKEHCLEC 59


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -3

Query: 702 FFVIIIALAGKVISFCMFLVSCFLIQTLQQKLNKSLCVNFSSLLL 568
           +F+ ++   GK      FL+ CF+  +  +  +  L +NF  + L
Sbjct: 16  YFLFVVRGTGKPFLPTSFLIYCFVSPSCLECSSVPLFINFIFMFL 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,799
Number of Sequences: 2352
Number of extensions: 14586
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)