Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0693
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032630-10|CAA21566.1|  396|Caenorhabditis elegans Hypothetical...    30   2.0  
Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U49829-4|AAK68350.1|  427|Caenorhabditis elegans Dehydrogenases,...    28   8.1  

>AL032630-10|CAA21566.1|  396|Caenorhabditis elegans Hypothetical
           protein Y62H9A.10 protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -3

Query: 702 FFVIIIALAGKVISFCMFLVSCFLIQTLQQKLNKSLCVNFSSLL 571
           FF++   +A  ++ +C+ L++   I  L  K   ++C NFSS+L
Sbjct: 140 FFIVTSPVAVSLLGYCIHLLA---ISLLPPKFVDNICFNFSSVL 180


>Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical
           protein ZK1037.8 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -3

Query: 687 IALAGKVISFCMFLVSCFLIQTLQQKLNKSLCVNFSSLLLDSSYQFLTILVILVS 523
           + LAG + ++ +F+     +  L+ KLN+    + SS+ L    +F+  L + +S
Sbjct: 190 VKLAGNLTTYVLFVEIIVFVVALKVKLNRISKASMSSVTLRMQKKFIKALNLQIS 244


>U49829-4|AAK68350.1|  427|Caenorhabditis elegans Dehydrogenases,
           short chain protein29 protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = -3

Query: 177 VVILRASVFPLAAFRSNSNARVLSCINVGITHGISTFSNFVVNNKSKSD 31
           +VI  A++    +F   S+  +  C++V I   I+T   F+   ++K+D
Sbjct: 121 IVICNAAILSFTSFMEISDELLRKCLDVNIFGTINTIRAFLPKMETKND 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,204,130
Number of Sequences: 27780
Number of extensions: 333303
Number of successful extensions: 796
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)