Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0693
         (749 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g80630.1 68414.m09462 leucine-rich repeat family protein            29   4.4  
At1g06520.1 68414.m00691 phospholipid/glycerol acyltransferase f...    28   5.8  
At2g34410.1 68415.m04217 O-acetyltransferase family protein simi...    28   7.6  

>At1g80630.1 68414.m09462 leucine-rich repeat family protein
          Length = 578

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 418 CPVIKDDDLIEIWKHCFRCKCLGIGCLT 501
           CP I  D ++E+W++C + + L I   T
Sbjct: 407 CPGITRDGILEVWRNCGKLRSLDISRCT 434


>At1g06520.1 68414.m00691 phospholipid/glycerol acyltransferase
           family protein contains Pfam profile PF01553:
           Acyltransferase
          Length = 585

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -3

Query: 702 FFVIIIALAGKVISFCMFLVSCFLIQTLQQ--KLNKSLCVNFSSL 574
           +F+++    G +I   + L+SC  + TLQQ  KL     + FS L
Sbjct: 129 YFMLVAFEGGSIIRAILLLLSCSFLWTLQQETKLRVLSFITFSGL 173


>At2g34410.1 68415.m04217 O-acetyltransferase family protein similar
           to O-acetyltransferase (GI:17016934) [Homo sapiens];
           contains 11 transmembrane domains
          Length = 540

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 681 LAGKVISFCMFLVSCFLIQ 625
           LAG  ISFC++L S  L+Q
Sbjct: 519 LAGAAISFCLYLTSLILLQ 537


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,969,417
Number of Sequences: 28952
Number of extensions: 296750
Number of successful extensions: 718
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)